RNA–Protein interactions for RNA: ENST00000589447.1

LINC01539-203, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4

Gene LINC01539, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-203ENST00000589447 CAMTA1Q9Y6Y1 1673 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 CPSF1Q10570 1443 aaKnown RBP4.02□□□□□ -1.77
LINC01539-203ENST00000589447 AKAP12Q02952 1782 aa4.02□□□□□ -1.77
LINC01539-203ENST00000589447 DLC1Q96QB1 1528 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 WDR33Q9C0J8 1336 aaKnown RBP4.01□□□□□ -1.77
LINC01539-203ENST00000589447 FAM208AQ9UK61 1670 aaKnown RBP4.01□□□□□ -1.77
LINC01539-203ENST00000589447 ANKRD33BA6NCL7 494 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 EPB41L2O43491 1005 aaKnown RBP4.01□□□□□ -1.77
LINC01539-203ENST00000589447 HMMRO75330 724 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 GSPT1P15170 499 aaKnown RBP4.01□□□□□ -1.77
LINC01539-203ENST00000589447 ANAPC15P60006 121 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 FKBP5Q13451 457 aaPredicted RBP4.01□□□□□ -1.77
LINC01539-203ENST00000589447 NOLC1Q14978 699 aaKnown RBP eCLIP4.01□□□□□ -1.77
LINC01539-203ENST00000589447 SYCP1Q15431 976 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 CCDC183Q5T5S1 534 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 EGFLAMQ63HQ2 1017 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 PHLDB3Q6NSJ2 640 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 TYW1BQ6NUM6 668 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 PLEKHM2Q8IWE5 1019 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 LARGE2Q8N3Y3 721 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 PDCL2Q8N4E4 241 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 ANKRD44Q8N8A2 993 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 EPAS1Q99814 870 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 CDCA7Q9BWT1 371 aaPredicted RBP4.01□□□□□ -1.77
LINC01539-203ENST00000589447 UBA5Q9GZZ9 404 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 NBPF3Q9H094 633 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 DCTPP1Q9H773 170 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 HCSTQ9UBK5 93 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 AXIN2Q9Y2T1 843 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 ATP6V1DQ9Y5K8 247 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 ATP10DQ9P241 1426 aa4.01□□□□□ -1.77
LINC01539-203ENST00000589447 LMO7Q8WWI1 1683 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 LRRC37A3O60309 1634 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 MYH15Q9Y2K3 1946 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 EIF3JO75822 258 aaKnown RBP4□□□□□ -1.77
LINC01539-203ENST00000589447 ERCC5P28715 1186 aaPredicted RBP4□□□□□ -1.77
LINC01539-203ENST00000589447 GJA5P36382 358 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 PSEN2P49810 448 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 IGBP1P78318 339 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 GABPB1Q06547 395 aaPredicted RBP4□□□□□ -1.77
LINC01539-203ENST00000589447 CUL4AQ13619 759 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 NFE2L2Q16236 605 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 TWISTNBQ3B726 338 aaPredicted RBP4□□□□□ -1.77
LINC01539-203ENST00000589447 DMRTA1Q5VZB9 504 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 FBXO33Q7Z6M2 555 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 SLC43A3Q8NBI5 491 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 TMEM87AQ8NBN3 555 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 MORC4Q8TE76 937 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 KCNB2Q92953 911 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 FEZ1Q99689 392 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 SPTLC3Q9NUV7 552 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 SLC52A1Q9NWF4 448 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 NLRP2Q9NX02 1062 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 SLAIN2Q9P270 581 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 TFIP11Q9UBB9 837 aaKnown RBP4□□□□□ -1.77
LINC01539-203ENST00000589447 USP25Q9UHP3 1055 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 VPS9D1Q9Y2B5 631 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 MAFBQ9Y5Q3 323 aaPredicted RBP4□□□□□ -1.77
LINC01539-203ENST00000589447 EID1Q9Y6B2 187 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 TECPR2O15040 1411 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 ATRNO75882 1429 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 PEAK1Q9H792 1746 aa4□□□□□ -1.77
LINC01539-203ENST00000589447 COL14A1Q05707 1796 aaKnown RBP3.99□□□□□ -1.77
LINC01539-203ENST00000589447 BCL9LQ86UU0 1499 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 CD163L1Q9NR16 1453 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 PTPRCP08575 1304 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 AFF2P51816 1311 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 CCDC66A2RUB6 948 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 LZTS3O60299 673 aaPredicted RBP3.99□□□□□ -1.77
LINC01539-203ENST00000589447 VAMP4O75379 141 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 ADCY5O95622 1261 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 ZSCAN20P17040 1043 aaPredicted RBP3.99□□□□□ -1.77
LINC01539-203ENST00000589447 SDSP20132 328 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 MX1P20591 662 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 IBSPP21815 317 aaPredicted RBP3.99□□□□□ -1.77
LINC01539-203ENST00000589447 PRKAR2BP31323 418 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 NEK4P51957 841 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 UBE2HP62256 183 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 FAM193AP78312 1265 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 PKP1Q13835 747 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 PTPROQ16827 1216 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 CREBRFQ8IUR6 639 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 ZGPATQ8N5A5 531 aaKnown RBP3.99□□□□□ -1.77
LINC01539-203ENST00000589447 RNF214Q8ND24 703 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 PIK3R5Q8WYR1 880 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 TMX3Q96JJ7 454 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 UCN2Q96RP3 112 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 ZBED2Q9BTP6 218 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 OSBPL3Q9H4L5 887 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 PRDM10Q9NQV6 1147 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 CGNQ9P2M7 1197 aaKnown RBP3.99□□□□□ -1.77
LINC01539-203ENST00000589447 ZHX1Q9UKY1 873 aaPredicted RBP3.99□□□□□ -1.77
LINC01539-203ENST00000589447 ZDHHC9Q9Y397 364 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 PCDHGA10Q9Y5H3 936 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 PIK3C2AO00443 1686 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 RTL1A6NKG5 1358 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 KIAA0232Q92628 1395 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 CASZ1Q86V15 1759 aa3.99□□□□□ -1.77
LINC01539-203ENST00000589447 PXDNLA1KZ92 1463 aa3.98□□□□□ -1.77
LINC01539-203ENST00000589447 AOX1Q06278 1338 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms