RNA–Protein interactions for RNA: ENST00000588706.1

TUBD1-209, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-209ENST00000588706 PPP1R18Q6NYC8 613 aa12.55□□□□□ -0.4
TUBD1-209ENST00000588706 ZNF530Q6P9A1 599 aaPredicted RBP12.55□□□□□ -0.4
TUBD1-209ENST00000588706 RIC3Q7Z5B4 369 aa12.55□□□□□ -0.4
TUBD1-209ENST00000588706 USP44Q9H0E7 712 aa12.55□□□□□ -0.4
TUBD1-209ENST00000588706 PARP4Q9UKK3 1724 aaKnown RBP12.54□□□□□ -0.4
TUBD1-209ENST00000588706 BTBD11A6QL63 1104 aa12.54□□□□□ -0.4
TUBD1-209ENST00000588706 F6X3S4 739 aa12.54□□□□□ -0.4
TUBD1-209ENST00000588706 C6orf229H3BNL8 230 aa12.54□□□□□ -0.4
TUBD1-209ENST00000588706 SPTLC1O15269 473 aa12.54□□□□□ -0.4
TUBD1-209ENST00000588706 GLRX3O76003 335 aaKnown RBP12.54□□□□□ -0.4
TUBD1-209ENST00000588706 S1PR4O95977 384 aa12.54□□□□□ -0.4
TUBD1-209ENST00000588706 MBD3O95983 291 aa12.54□□□□□ -0.4
TUBD1-209ENST00000588706 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.54□□□□□ -0.4
TUBD1-209ENST00000588706 PCDHGC3Q9UN70 934 aa12.54□□□□□ -0.4
TUBD1-209ENST00000588706 LRRFIP2Q9Y608 721 aaKnown RBP12.54□□□□□ -0.4
TUBD1-209ENST00000588706 RGPD2P0DJD1 1756 aa12.53□□□□□ -0.4
TUBD1-209ENST00000588706 RNMTO43148 476 aaKnown RBP12.53□□□□□ -0.4
TUBD1-209ENST00000588706 GCP02774 474 aa12.53□□□□□ -0.4
TUBD1-209ENST00000588706 CHMLP26374 656 aa12.53□□□□□ -0.4
TUBD1-209ENST00000588706 CUL4AQ13619 759 aa12.53□□□□□ -0.4
TUBD1-209ENST00000588706 NBPF6Q5VWK0 638 aa12.53□□□□□ -0.4
TUBD1-209ENST00000588706 NBPF4Q96M43 638 aa12.53□□□□□ -0.4
TUBD1-209ENST00000588706 USB1Q9BQ65 265 aaKnown RBP12.53□□□□□ -0.4
TUBD1-209ENST00000588706 C19orf44Q9H6X5 657 aa12.53□□□□□ -0.4
TUBD1-209ENST00000588706 MIS18AQ9NYP9 233 aa12.53□□□□□ -0.4
TUBD1-209ENST00000588706 COL15A1P39059 1388 aa12.53□□□□□ -0.4
TUBD1-209ENST00000588706 C1orf167Q5SNV9 1468 aa12.53□□□□□ -0.4
TUBD1-209ENST00000588706 BAG4O95429 457 aaKnown RBP12.52□□□□□ -0.41
TUBD1-209ENST00000588706 CLK2P49760 499 aaKnown RBP12.52□□□□□ -0.41
TUBD1-209ENST00000588706 CSPP1Q1MSJ5 1256 aa12.52□□□□□ -0.41
TUBD1-209ENST00000588706 MSS51Q4VC12 460 aa12.52□□□□□ -0.41
TUBD1-209ENST00000588706 BEND3Q5T5X7 828 aa12.52□□□□□ -0.41
TUBD1-209ENST00000588706 KSR2Q6VAB6 950 aa12.52□□□□□ -0.41
TUBD1-209ENST00000588706 CLASRPQ8N2M8 674 aaKnown RBP12.52□□□□□ -0.41
TUBD1-209ENST00000588706 RHPN1Q8TCX5 695 aa12.52□□□□□ -0.41
TUBD1-209ENST00000588706 GRPEL1Q9HAV7 217 aa12.52□□□□□ -0.41
TUBD1-209ENST00000588706 EXOC6BQ9Y2D4 811 aa12.52□□□□□ -0.41
TUBD1-209ENST00000588706 UTYO14607 1347 aa12.52□□□□□ -0.41
TUBD1-209ENST00000588706 RAD50Q92878 1312 aa12.52□□□□□ -0.41
TUBD1-209ENST00000588706 MRC1P22897 1456 aa12.52□□□□□ -0.41
TUBD1-209ENST00000588706 SMARCA5O60264 1052 aaPredicted RBP12.51□□□□□ -0.41
TUBD1-209ENST00000588706 SH3D19Q5HYK7 790 aa12.51□□□□□ -0.41
TUBD1-209ENST00000588706 KIAA1211Q6ZU35 1233 aa12.51□□□□□ -0.41
TUBD1-209ENST00000588706 C16orf71Q8IYS4 520 aaPredicted RBP12.51□□□□□ -0.41
TUBD1-209ENST00000588706 LINS1Q8NG48 757 aa12.51□□□□□ -0.41
TUBD1-209ENST00000588706 SYMPKQ92797 1274 aaKnown RBP12.51□□□□□ -0.41
TUBD1-209ENST00000588706 SYAP1Q96A49 352 aaPredicted RBP12.51□□□□□ -0.41
TUBD1-209ENST00000588706 LTV1Q96GA3 475 aaPredicted RBP12.51□□□□□ -0.41
TUBD1-209ENST00000588706 DDX21Q9NR30 783 aaKnown RBP eCLIP12.51□□□□□ -0.41
TUBD1-209ENST00000588706 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
TUBD1-209ENST00000588706 SPG7Q9UQ90 795 aa12.51□□□□□ -0.41
TUBD1-209ENST00000588706 ERBB4Q15303 1308 aa12.51□□□□□ -0.41
TUBD1-209ENST00000588706 PKD1L3Q7Z443 1732 aa12.51□□□□□ -0.41
TUBD1-209ENST00000588706 PNMA6EA0A0J9YXQ4 647 aa12.5□□□□□ -0.41
TUBD1-209ENST00000588706 SURF6O75683 361 aaKnown RBP12.5□□□□□ -0.41
TUBD1-209ENST00000588706 ZNF445P59923 1031 aa12.5□□□□□ -0.41
TUBD1-209ENST00000588706 MTMR2Q13614 643 aa12.5□□□□□ -0.41
TUBD1-209ENST00000588706 PPP1R42Q7Z4L9 355 aa12.5□□□□□ -0.41
TUBD1-209ENST00000588706 RETREG3Q86VR2 466 aa12.5□□□□□ -0.41
TUBD1-209ENST00000588706 ANKRD24Q8TF21 1146 aa12.5□□□□□ -0.41
TUBD1-209ENST00000588706 LIMD1Q9UGP4 676 aa12.5□□□□□ -0.41
TUBD1-209ENST00000588706 RFX7Q2KHR2 1363 aa12.5□□□□□ -0.41
TUBD1-209ENST00000588706 LAMB4A4D0S4 1761 aa12.5□□□□□ -0.41
TUBD1-209ENST00000588706 SRGAP3O43295 1099 aa12.49□□□□□ -0.41
TUBD1-209ENST00000588706 GIGYF1O75420 1035 aaPredicted RBP12.49□□□□□ -0.41
TUBD1-209ENST00000588706 HSPA4P34932 840 aa12.49□□□□□ -0.41
TUBD1-209ENST00000588706 CCDC173Q0VFZ6 552 aa12.49□□□□□ -0.41
TUBD1-209ENST00000588706 NEXNQ0ZGT2 675 aa12.49□□□□□ -0.41
TUBD1-209ENST00000588706 LARP1Q6PKG0 1096 aaKnown RBP12.49□□□□□ -0.41
TUBD1-209ENST00000588706 FAM160A2Q8N612 972 aaPredicted RBP12.49□□□□□ -0.41
TUBD1-209ENST00000588706 OTUD7AQ8TE49 926 aaPredicted RBP12.49□□□□□ -0.41
TUBD1-209ENST00000588706 RAPGEF4Q8WZA2 1011 aa12.49□□□□□ -0.41
TUBD1-209ENST00000588706 ZBTB3Q9H5J0 574 aa12.49□□□□□ -0.41
TUBD1-209ENST00000588706 BRPF3Q9ULD4 1205 aa12.49□□□□□ -0.41
TUBD1-209ENST00000588706 ATP6V1DQ9Y5K8 247 aa12.49□□□□□ -0.41
TUBD1-209ENST00000588706 DDX49Q9Y6V7 483 aaKnown RBP12.49□□□□□ -0.41
TUBD1-209ENST00000588706 NPHP3Q7Z494 1330 aa12.48□□□□□ -0.41
TUBD1-209ENST00000588706 XRCC6P12956 609 aaKnown RBP eCLIP12.48□□□□□ -0.41
TUBD1-209ENST00000588706 SKIV2LQ15477 1246 aaKnown RBP12.48□□□□□ -0.41
TUBD1-209ENST00000588706 KRT28Q7Z3Y7 464 aa12.48□□□□□ -0.41
TUBD1-209ENST00000588706 TM6SF1Q9BZW5 370 aa12.48□□□□□ -0.41
TUBD1-209ENST00000588706 ANO2Q9NQ90 1003 aa12.48□□□□□ -0.41
TUBD1-209ENST00000588706 PRDM9Q9NQV7 894 aa12.48□□□□□ -0.41
TUBD1-209ENST00000588706 C9orf78Q9NZ63 289 aaPredicted RBP12.48□□□□□ -0.41
TUBD1-209ENST00000588706 CHPF2Q9P2E5 772 aa12.48□□□□□ -0.41
TUBD1-209ENST00000588706 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.48□□□□□ -0.41
TUBD1-209ENST00000588706 ADCY9O60503 1353 aa12.47□□□□□ -0.41
TUBD1-209ENST00000588706 CPDO75976 1380 aa12.47□□□□□ -0.41
TUBD1-209ENST00000588706 WDR33Q9C0J8 1336 aaKnown RBP12.47□□□□□ -0.41
TUBD1-209ENST00000588706 PI4KAP2A4QPH2 592 aa12.47□□□□□ -0.41
TUBD1-209ENST00000588706 SPDYE5A6NIY4 337 aa12.47□□□□□ -0.41
TUBD1-209ENST00000588706 RNF223E7ERA6 249 aa12.47□□□□□ -0.41
TUBD1-209ENST00000588706 APBB1O00213 710 aa12.47□□□□□ -0.41
TUBD1-209ENST00000588706 SGSM2O43147 1006 aa12.47□□□□□ -0.41
TUBD1-209ENST00000588706 CD2BP2O95400 341 aaKnown RBP12.47□□□□□ -0.41
TUBD1-209ENST00000588706 TATP17735 454 aaPredicted RBP12.47□□□□□ -0.41
TUBD1-209ENST00000588706 NCLP19338 710 aaKnown RBP12.47□□□□□ -0.41
TUBD1-209ENST00000588706 NEK4P51957 841 aa12.47□□□□□ -0.41
TUBD1-209ENST00000588706 HS1BP3Q53T59 392 aa12.47□□□□□ -0.41
TUBD1-209ENST00000588706 NUTM2GQ5VZR2 741 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms