RNA–Protein interactions for RNA: ENST00000587629.5

SDF2-205, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 775 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-205ENST00000587629 TAF1P21675 1872 aa8.33□□□□□ -1.08
SDF2-205ENST00000587629 ECE1P42892 770 aa8.33□□□□□ -1.08
SDF2-205ENST00000587629 RBM26Q5T8P6 1007 aaKnown RBP8.33□□□□□ -1.08
SDF2-205ENST00000587629 RIC3Q7Z5B4 369 aa8.33□□□□□ -1.08
SDF2-205ENST00000587629 MICALL2Q8IY33 904 aa8.33□□□□□ -1.08
SDF2-205ENST00000587629 CFAP44Q96MT7 982 aa8.33□□□□□ -1.08
SDF2-205ENST00000587629 ISCA1Q9BUE6 129 aa8.33□□□□□ -1.08
SDF2-205ENST00000587629 PHAXQ9H814 394 aaKnown RBP8.33□□□□□ -1.08
SDF2-205ENST00000587629 HYPKQ9NX55 129 aa8.33□□□□□ -1.08
SDF2-205ENST00000587629 TLL2Q9Y6L7 1015 aa8.33□□□□□ -1.08
SDF2-205ENST00000587629 LAMB2P55268 1798 aa8.33□□□□□ -1.08
SDF2-205ENST00000587629 PSMD14O00487 310 aa8.32□□□□□ -1.08
SDF2-205ENST00000587629 IRS4O14654 1257 aaPredicted RBP8.32□□□□□ -1.08
SDF2-205ENST00000587629 APAF1O14727 1248 aa8.32□□□□□ -1.08
SDF2-205ENST00000587629 HOXB7P09629 217 aa8.32□□□□□ -1.08
SDF2-205ENST00000587629 SF3B3Q15393 1217 aaKnown RBP8.32□□□□□ -1.08
SDF2-205ENST00000587629 TBC1D10BQ4KMP7 808 aaPredicted RBP8.32□□□□□ -1.08
SDF2-205ENST00000587629 SAMD7Q7Z3H4 446 aa8.32□□□□□ -1.08
SDF2-205ENST00000587629 USP48Q86UV5 1035 aa8.32□□□□□ -1.08
SDF2-205ENST00000587629 CCDC85AQ96PX6 553 aaPredicted RBP8.32□□□□□ -1.08
SDF2-205ENST00000587629 MYD88Q99836 296 aa8.32□□□□□ -1.08
SDF2-205ENST00000587629 BEGAINQ9BUH8 593 aa8.32□□□□□ -1.08
SDF2-205ENST00000587629 POLLQ9UGP5 575 aa8.32□□□□□ -1.08
SDF2-205ENST00000587629 ANKRD36CQ5JPF3 1778 aa8.32□□□□□ -1.08
SDF2-205ENST00000587629 COL4A1P02462 1669 aa8.31□□□□□ -1.08
SDF2-205ENST00000587629 ECE2O60344 883 aa8.31□□□□□ -1.08
SDF2-205ENST00000587629 EGFRP00533 1210 aa8.31□□□□□ -1.08
SDF2-205ENST00000587629 RPS8P62241 208 aaKnown RBP8.31□□□□□ -1.08
SDF2-205ENST00000587629 GOLGA2Q08379 1002 aa8.31□□□□□ -1.08
SDF2-205ENST00000587629 CDC37L1Q7L3B6 337 aa8.31□□□□□ -1.08
SDF2-205ENST00000587629 TMC4Q7Z404 712 aa8.31□□□□□ -1.08
SDF2-205ENST00000587629 SAPCD2Q86UD0 394 aa8.31□□□□□ -1.08
SDF2-205ENST00000587629 C8orf58Q8NAV2 365 aa8.31□□□□□ -1.08
SDF2-205ENST00000587629 PRKRIP1Q9H875 184 aaPredicted RBP8.31□□□□□ -1.08
SDF2-205ENST00000587629 SEC31BQ9NQW1 1179 aa8.31□□□□□ -1.08
SDF2-205ENST00000587629 G3V3G9 751 aa8.3□□□□□ -1.08
SDF2-205ENST00000587629 ZNF853P0CG23 659 aa8.3□□□□□ -1.08
SDF2-205ENST00000587629 GNAI1P63096 354 aa8.3□□□□□ -1.08
SDF2-205ENST00000587629 DCAF8Q5TAQ9 597 aa8.3□□□□□ -1.08
SDF2-205ENST00000587629 ZBTB38Q8NAP3 1195 aaPredicted RBP8.3□□□□□ -1.08
SDF2-205ENST00000587629 TBC1D16Q8TBP0 767 aa8.3□□□□□ -1.08
SDF2-205ENST00000587629 ZC3H15Q8WU90 426 aaKnown RBP8.3□□□□□ -1.08
SDF2-205ENST00000587629 ABHD8Q96I13 439 aa8.3□□□□□ -1.08
SDF2-205ENST00000587629 IFT57Q9NWB7 429 aa8.3□□□□□ -1.08
SDF2-205ENST00000587629 ANKIB1Q9P2G1 1089 aa8.3□□□□□ -1.08
SDF2-205ENST00000587629 PGAP2Q9UHJ9 254 aa8.3□□□□□ -1.08
SDF2-205ENST00000587629 DUOX1Q9NRD9 1551 aa8.3□□□□□ -1.08
SDF2-205ENST00000587629 CDHR2Q9BYE9 1310 aa8.29□□□□□ -1.08
SDF2-205ENST00000587629 DDX60Q8IY21 1712 aaKnown RBP8.29□□□□□ -1.08
SDF2-205ENST00000587629 POTEMA6NI47 508 aa8.29□□□□□ -1.08
SDF2-205ENST00000587629 CCDC85CA6NKD9 419 aa8.29□□□□□ -1.08
SDF2-205ENST00000587629 ADM5C9JUS6 153 aa8.29□□□□□ -1.08
SDF2-205ENST00000587629 UFL1O94874 794 aa8.29□□□□□ -1.08
SDF2-205ENST00000587629 MAP2K2P36507 400 aa8.29□□□□□ -1.08
SDF2-205ENST00000587629 TRIM28Q13263 835 aaKnown RBP8.29□□□□□ -1.08
SDF2-205ENST00000587629 KRT26Q7Z3Y9 468 aa8.29□□□□□ -1.08
SDF2-205ENST00000587629 ZIC5Q96T25 663 aa8.29□□□□□ -1.08
SDF2-205ENST00000587629 EYA3Q99504 573 aa8.29□□□□□ -1.08
SDF2-205ENST00000587629 ZC3H12CQ9C0D7 883 aaKnown RBP8.29□□□□□ -1.08
SDF2-205ENST00000587629 RTL9Q8NET4 1388 aa8.29□□□□□ -1.08
SDF2-205ENST00000587629 ASTN2O75129 1339 aaPredicted RBP8.29□□□□□ -1.08
SDF2-205ENST00000587629 WTIPA6NIX2 430 aaPredicted RBP8.28□□□□□ -1.08
SDF2-205ENST00000587629 HUNKP57058 714 aa8.28□□□□□ -1.08
SDF2-205ENST00000587629 CALD1Q05682 793 aaKnown RBP8.28□□□□□ -1.08
SDF2-205ENST00000587629 CCDC152Q4G0S7 254 aa8.28□□□□□ -1.08
SDF2-205ENST00000587629 TSPYL6Q8N831 410 aa8.28□□□□□ -1.08
SDF2-205ENST00000587629 DPF2Q92785 391 aa8.28□□□□□ -1.08
SDF2-205ENST00000587629 TSR2Q969E8 191 aaKnown RBP8.28□□□□□ -1.08
SDF2-205ENST00000587629 DCPSQ96C86 337 aaKnown RBP8.28□□□□□ -1.08
SDF2-205ENST00000587629 CWC25Q9NXE8 425 aaPredicted RBP8.28□□□□□ -1.08
SDF2-205ENST00000587629 GGA1Q9UJY5 639 aa8.28□□□□□ -1.08
SDF2-205ENST00000587629 MAP3K2Q9Y2U5 619 aa8.28□□□□□ -1.08
SDF2-205ENST00000587629 FARP1Q9Y4F1 1045 aaPredicted RBP8.28□□□□□ -1.08
SDF2-205ENST00000587629 TRPM7Q96QT4 1865 aa8.28□□□□□ -1.08
SDF2-205ENST00000587629 PDE8AO60658 829 aa8.27□□□□□ -1.09
SDF2-205ENST00000587629 PCCAP05165 728 aaPredicted RBP8.27□□□□□ -1.09
SDF2-205ENST00000587629 KIF4BQ2VIQ3 1234 aa8.27□□□□□ -1.09
SDF2-205ENST00000587629 CCDC184Q52MB2 194 aa8.27□□□□□ -1.09
SDF2-205ENST00000587629 CCDC30Q5VVM6 783 aa8.27□□□□□ -1.09
SDF2-205ENST00000587629 CCDC191Q8NCU4 936 aa8.27□□□□□ -1.09
SDF2-205ENST00000587629 OTUD5Q96G74 571 aa8.27□□□□□ -1.09
SDF2-205ENST00000587629 METTL22Q9BUU2 404 aaPredicted RBP8.27□□□□□ -1.09
SDF2-205ENST00000587629 SCAF8Q9UPN6 1271 aaKnown RBP8.27□□□□□ -1.09
SDF2-205ENST00000587629 LRRC37AA6NMS7 1700 aa8.26□□□□□ -1.09
SDF2-205ENST00000587629 PI4KAP2A4QPH2 592 aa8.26□□□□□ -1.09
SDF2-205ENST00000587629 DDX58O95786 925 aaKnown RBP8.26□□□□□ -1.09
SDF2-205ENST00000587629 VIL1P09327 827 aaKnown RBP8.26□□□□□ -1.09
SDF2-205ENST00000587629 HSP90B1P14625 803 aaKnown RBP8.26□□□□□ -1.09
SDF2-205ENST00000587629 RPS12P25398 132 aaKnown RBP8.26□□□□□ -1.09
SDF2-205ENST00000587629 ZNF157P51786 506 aaPredicted RBP8.26□□□□□ -1.09
SDF2-205ENST00000587629 CLCN6P51797 869 aa8.26□□□□□ -1.09
SDF2-205ENST00000587629 BRPF1P55201 1214 aaPredicted RBP8.26□□□□□ -1.09
SDF2-205ENST00000587629 SCARF1Q14162 830 aa8.26□□□□□ -1.09
SDF2-205ENST00000587629 ANKRD18AQ8IVF6 992 aa8.26□□□□□ -1.09
SDF2-205ENST00000587629 PI4KAP1Q8N8J0 262 aa8.26□□□□□ -1.09
SDF2-205ENST00000587629 C2orf69Q8N8R5 385 aa8.26□□□□□ -1.09
SDF2-205ENST00000587629 FBXW7Q969H0 707 aa8.26□□□□□ -1.09
SDF2-205ENST00000587629 HHIPL1Q96JK4 782 aa8.26□□□□□ -1.09
SDF2-205ENST00000587629 GBA2Q9HCG7 927 aaPredicted RBP8.26□□□□□ -1.09
SDF2-205ENST00000587629 GGA3Q9NZ52 723 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms