RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 SMG9Q9H0W8 520 aaKnown RBP8.42□□□□□ -1.06
VMP1-205ENST00000587470 J3QW42 95 aa8.41□□□□□ -1.06
VMP1-205ENST00000587470 GHRHP01286 108 aa8.41□□□□□ -1.06
VMP1-205ENST00000587470 ZMYM1Q5SVZ6 1142 aa8.41□□□□□ -1.06
VMP1-205ENST00000587470 FMR1NBQ8N0W7 255 aaPredicted RBP8.41□□□□□ -1.06
VMP1-205ENST00000587470 DTWD1Q8N5C7 304 aa8.41□□□□□ -1.06
VMP1-205ENST00000587470 HELQQ8TDG4 1101 aa8.41□□□□□ -1.06
VMP1-205ENST00000587470 RBSNQ9H1K0 784 aa8.41□□□□□ -1.06
VMP1-205ENST00000587470 ADGRE1Q14246 886 aa8.4□□□□□ -1.06
VMP1-205ENST00000587470 TTC39BQ5VTQ0 682 aaPredicted RBP8.4□□□□□ -1.06
VMP1-205ENST00000587470 WFDC8Q8IUA0 241 aa8.4□□□□□ -1.06
VMP1-205ENST00000587470 OR13H1Q8NG92 308 aa8.4□□□□□ -1.06
VMP1-205ENST00000587470 PLD4Q96BZ4 506 aa8.4□□□□□ -1.06
VMP1-205ENST00000587470 NSUN5Q96P11 429 aaKnown RBP8.4□□□□□ -1.06
VMP1-205ENST00000587470 RPLP1P05386 114 aaKnown RBP8.39□□□□□ -1.07
VMP1-205ENST00000587470 NRG1Q02297 640 aaPredicted RBP8.39□□□□□ -1.07
VMP1-205ENST00000587470 LENG1Q96BZ8 264 aaPredicted RBP8.39□□□□□ -1.07
VMP1-205ENST00000587470 SCNN1AP37088 669 aa8.38□□□□□ -1.07
VMP1-205ENST00000587470 MBTPS1Q14703 1052 aa8.38□□□□□ -1.07
VMP1-205ENST00000587470 NOM1Q5C9Z4 860 aaKnown RBP8.38□□□□□ -1.07
VMP1-205ENST00000587470 PDE12Q6L8Q7 609 aaKnown RBP8.38□□□□□ -1.07
VMP1-205ENST00000587470 FBXO11Q86XK2 927 aa8.38□□□□□ -1.07
VMP1-205ENST00000587470 GTF3C2Q8WUA4 911 aaPredicted RBP8.38□□□□□ -1.07
VMP1-205ENST00000587470 PSMG3-AS1Q96PY0 264 aa8.38□□□□□ -1.07
VMP1-205ENST00000587470 KRTAP9-6A0A140TA67 174 aa8.37□□□□□ -1.07
VMP1-205ENST00000587470 ATCAYQ86WG3 371 aa8.37□□□□□ -1.07
VMP1-205ENST00000587470 NUDT16Q96DE0 195 aaKnown RBP8.37□□□□□ -1.07
VMP1-205ENST00000587470 SSBP4Q9BWG4 385 aaPredicted RBP8.37□□□□□ -1.07
VMP1-205ENST00000587470 ABI2Q9NYB9 513 aaPredicted RBP8.37□□□□□ -1.07
VMP1-205ENST00000587470 MTMR7Q9Y216 660 aa8.37□□□□□ -1.07
VMP1-205ENST00000587470 PCSK2P16519 638 aa8.36□□□□□ -1.07
VMP1-205ENST00000587470 HYAL2Q12891 473 aa8.36□□□□□ -1.07
VMP1-205ENST00000587470 SHISA2Q6UWI4 295 aa8.36□□□□□ -1.07
VMP1-205ENST00000587470 CACTIN-AS1Q8N1I8 211 aa8.36□□□□□ -1.07
VMP1-205ENST00000587470 SPACA7Q96KW9 195 aa8.36□□□□□ -1.07
VMP1-205ENST00000587470 PRSS36Q5K4E3 855 aa8.35□□□□□ -1.07
VMP1-205ENST00000587470 GDF6Q6KF10 455 aaPredicted RBP8.35□□□□□ -1.07
VMP1-205ENST00000587470 ALKBH2Q6NS38 261 aa8.35□□□□□ -1.07
VMP1-205ENST00000587470 EDEM1Q92611 657 aa8.35□□□□□ -1.07
VMP1-205ENST00000587470 ELP3Q9H9T3 547 aa8.35□□□□□ -1.07
VMP1-205ENST00000587470 CARNS1A5YM72 827 aa8.34□□□□□ -1.07
VMP1-205ENST00000587470 MPSTP25325 297 aa8.34□□□□□ -1.07
VMP1-205ENST00000587470 EIF1AXP47813 144 aaKnown RBP8.34□□□□□ -1.07
VMP1-205ENST00000587470 DNM1Q05193 864 aaKnown RBP8.34□□□□□ -1.07
VMP1-205ENST00000587470 COL13A1Q5TAT6 717 aaPredicted RBP8.34□□□□□ -1.07
VMP1-205ENST00000587470 PHLDB3Q6NSJ2 640 aa8.34□□□□□ -1.07
VMP1-205ENST00000587470 XKR5Q6UX68 686 aa8.34□□□□□ -1.07
VMP1-205ENST00000587470 ZNF438Q7Z4V0 828 aa8.34□□□□□ -1.07
VMP1-205ENST00000587470 IL22RA1Q8N6P7 574 aa8.34□□□□□ -1.07
VMP1-205ENST00000587470 USP21Q9UK80 565 aa8.34□□□□□ -1.07
VMP1-205ENST00000587470 KIF4AO95239 1232 aa8.33□□□□□ -1.08
VMP1-205ENST00000587470 H2AFB1P0C5Y9 115 aa8.33□□□□□ -1.08
VMP1-205ENST00000587470 H2AFB2P0C5Z0 115 aa8.33□□□□□ -1.08
VMP1-205ENST00000587470 NPR3P17342 541 aa8.33□□□□□ -1.08
VMP1-205ENST00000587470 MZF1P28698 734 aaPredicted RBP8.33□□□□□ -1.08
VMP1-205ENST00000587470 IGF2-ASQ6U949 168 aa8.33□□□□□ -1.08
VMP1-205ENST00000587470 TXNRD3Q86VQ6 643 aa8.33□□□□□ -1.08
VMP1-205ENST00000587470 TTC16Q8NEE8 873 aa8.33□□□□□ -1.08
VMP1-205ENST00000587470 TMEM63CQ9P1W3 806 aa8.33□□□□□ -1.08
VMP1-205ENST00000587470 USTQ9Y2C2 406 aa8.33□□□□□ -1.08
VMP1-205ENST00000587470 DEAF1O75398 565 aaPredicted RBP8.32□□□□□ -1.08
VMP1-205ENST00000587470 SMNDC1O75940 238 aaKnown RBP eCLIP8.32□□□□□ -1.08
VMP1-205ENST00000587470 FAM13AO94988 1023 aa8.32□□□□□ -1.08
VMP1-205ENST00000587470 PDGFAP04085 211 aa8.32□□□□□ -1.08
VMP1-205ENST00000587470 CYP2E1P05181 493 aaPredicted RBP8.32□□□□□ -1.08
VMP1-205ENST00000587470 FKBP4Q02790 459 aaKnown RBP eCLIP8.32□□□□□ -1.08
VMP1-205ENST00000587470 MTMR3Q13615 1198 aa8.32□□□□□ -1.08
VMP1-205ENST00000587470 MUC3BQ9H195 1237 aa8.32□□□□□ -1.08
VMP1-205ENST00000587470 SRA1Q9HD15 236 aaKnown RBP8.32□□□□□ -1.08
VMP1-205ENST00000587470 SF3B2Q13435 895 aaKnown RBP8.31□□□□□ -1.08
VMP1-205ENST00000587470 AAMPQ13685 434 aa8.31□□□□□ -1.08
VMP1-205ENST00000587470 C8orf34Q49A92 452 aa8.31□□□□□ -1.08
VMP1-205ENST00000587470 ARTNQ5T4W7 220 aa8.31□□□□□ -1.08
VMP1-205ENST00000587470 NCAPG2Q86XI2 1143 aa8.31□□□□□ -1.08
VMP1-205ENST00000587470 MAP4K3Q8IVH8 894 aa8.31□□□□□ -1.08
VMP1-205ENST00000587470 DCAF11Q8TEB1 546 aa8.31□□□□□ -1.08
VMP1-205ENST00000587470 GGNBP2Q9H3C7 697 aa8.31□□□□□ -1.08
VMP1-205ENST00000587470 TRIM33Q9UPN9 1127 aa8.31□□□□□ -1.08
VMP1-205ENST00000587470 DLL1O00548 723 aa8.3□□□□□ -1.08
VMP1-205ENST00000587470 ATP11AP98196 1134 aa8.3□□□□□ -1.08
VMP1-205ENST00000587470 CEP135Q66GS9 1140 aa8.3□□□□□ -1.08
VMP1-205ENST00000587470 B4GALNT3Q6L9W6 998 aa8.3□□□□□ -1.08
VMP1-205ENST00000587470 CEP120Q8N960 986 aa8.3□□□□□ -1.08
VMP1-205ENST00000587470 CNTN3Q9P232 1028 aa8.3□□□□□ -1.08
VMP1-205ENST00000587470 PPME1Q9Y570 386 aa8.3□□□□□ -1.08
VMP1-205ENST00000587470 USP5P45974 858 aa8.29□□□□□ -1.08
VMP1-205ENST00000587470 SETDB1Q15047 1291 aa8.29□□□□□ -1.08
VMP1-205ENST00000587470 PMEPA1Q969W9 287 aa8.29□□□□□ -1.08
VMP1-205ENST00000587470 PBX4Q9BYU1 374 aa8.29□□□□□ -1.08
VMP1-205ENST00000587470 RASSF4Q9H2L5 321 aa8.29□□□□□ -1.08
VMP1-205ENST00000587470 POLIQ9UNA4 740 aa8.29□□□□□ -1.08
VMP1-205ENST00000587470 SUPT5HO00267 1087 aaKnown RBP8.28□□□□□ -1.08
VMP1-205ENST00000587470 ABL1P00519 1130 aa8.28□□□□□ -1.08
VMP1-205ENST00000587470 CES1P23141 567 aa8.28□□□□□ -1.08
VMP1-205ENST00000587470 C1orf127Q8N9H9 656 aa8.28□□□□□ -1.08
VMP1-205ENST00000587470 WFDC12Q8WWY7 111 aa8.28□□□□□ -1.08
VMP1-205ENST00000587470 ARID3AQ99856 593 aa8.28□□□□□ -1.08
VMP1-205ENST00000587470 SALL4Q9UJQ4 1053 aa8.28□□□□□ -1.08
VMP1-205ENST00000587470 A6NHS1 94 aa8.27□□□□□ -1.09
VMP1-205ENST00000587470 CDC27P30260 824 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms