RNA–Protein interactions for RNA: ENST00000587429.1

PKN1-210, Transcript of protein kinase N1, humanhuman

TSL 4

Gene PKN1, Length 562 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-210ENST00000587429 UFL1O94874 794 aa27.59■■■□□ 2.01
PKN1-210ENST00000587429 CASP7P55210 303 aa27.59■■■□□ 2.01
PKN1-210ENST00000587429 USP50Q70EL3 339 aaPredicted RBP27.59■■■□□ 2.01
PKN1-210ENST00000587429 EYA3Q99504 573 aa27.59■■■□□ 2.01
PKN1-210ENST00000587429 BCL2L13Q9BXK5 485 aa27.59■■■□□ 2.01
PKN1-210ENST00000587429 ADARB2Q9NS39 739 aaKnown RBP27.59■■■□□ 2.01
PKN1-210ENST00000587429 SPEF2Q9C093 1822 aa27.59■■■□□ 2.01
PKN1-210ENST00000587429 SHTN1A0MZ66 631 aa27.58■■■□□ 2.01
PKN1-210ENST00000587429 PSMD14O00487 310 aa27.57■■■□□ 2
PKN1-210ENST00000587429 ECE2O60344 883 aa27.57■■■□□ 2
PKN1-210ENST00000587429 FMR1Q06787 632 aaKnown RBP eCLIP27.57■■■□□ 22e-6■■■■□ 19.4
PKN1-210ENST00000587429 ZC3H12CQ9C0D7 883 aaKnown RBP27.57■■■□□ 2
PKN1-210ENST00000587429 MKRN1Q9UHC7 482 aaKnown RBP27.57■■■□□ 2
PKN1-210ENST00000587429 GGA1Q9UJY5 639 aa27.57■■■□□ 2
PKN1-210ENST00000587429 ZBTB12Q9Y330 459 aaPredicted RBP27.57■■■□□ 2
PKN1-210ENST00000587429 WTIPA6NIX2 430 aaPredicted RBP27.56■■■□□ 2
PKN1-210ENST00000587429 CDC5LQ99459 802 aaKnown RBP27.56■■■□□ 2
PKN1-210ENST00000587429 SCN9AQ15858 1988 aa27.56■■■□□ 2
PKN1-210ENST00000587429 TMEM88BA6NKF7 163 aa27.55■■■□□ 2
PKN1-210ENST00000587429 BEND3Q5T5X7 828 aa27.55■■■□□ 2
PKN1-210ENST00000587429 PLA2G12BQ9BX93 195 aa27.55■■■□□ 2
PKN1-210ENST00000587429 CNOT7Q9UIV1 285 aaKnown RBP27.55■■■□□ 2
PKN1-210ENST00000587429 RTL9Q8NET4 1388 aa27.54■■■□□ 2
PKN1-210ENST00000587429 XDHP47989 1333 aa27.53■■■□□ 2
PKN1-210ENST00000587429 HIRAP54198 1017 aaPredicted RBP27.53■■■□□ 2
PKN1-210ENST00000587429 BSDC1Q9NW68 430 aaPredicted RBP27.53■■■□□ 2
PKN1-210ENST00000587429 MINPP1Q9UNW1 487 aa27.53■■■□□ 2
PKN1-210ENST00000587429 CSF1RP07333 972 aa27.52■■■□□ 2
PKN1-210ENST00000587429 TRPM4Q8TD43 1214 aa27.52■■■□□ 2
PKN1-210ENST00000587429 TRAF5O00463 557 aa27.51■■□□□ 1.99
PKN1-210ENST00000587429 ITGA6P23229 1130 aa27.51■■□□□ 1.99
PKN1-210ENST00000587429 FAM161AQ3B820 660 aa27.51■■□□□ 1.99
PKN1-210ENST00000587429 MICALL2Q8IY33 904 aa27.51■■□□□ 1.99
PKN1-210ENST00000587429 ATP2B4P23634 1241 aa27.5■■□□□ 1.99
PKN1-210ENST00000587429 G3V3G9 751 aa27.49■■□□□ 1.99
PKN1-210ENST00000587429 H7C1D1 291 aa27.49■■□□□ 1.99
PKN1-210ENST00000587429 DCAF8Q5TAQ9 597 aa27.49■■□□□ 1.99
PKN1-210ENST00000587429 DPF2Q92785 391 aa27.49■■□□□ 1.99
PKN1-210ENST00000587429 CNTNAP1P78357 1384 aa27.48■■□□□ 1.99
PKN1-210ENST00000587429 POLR2AP24928 1970 aaKnown RBP27.48■■□□□ 1.99
PKN1-210ENST00000587429 E9PSI1 815 aa27.48■■□□□ 1.99
PKN1-210ENST00000587429 FOXO4P98177 505 aa27.48■■□□□ 1.99
PKN1-210ENST00000587429 SLFN5Q08AF3 891 aa27.48■■□□□ 1.99
PKN1-210ENST00000587429 SAMD7Q7Z3H4 446 aa27.48■■□□□ 1.99
PKN1-210ENST00000587429 CDCA7LQ96GN5 454 aa27.48■■□□□ 1.99
PKN1-210ENST00000587429 TRPM7Q96QT4 1865 aa27.48■■□□□ 1.99
PKN1-210ENST00000587429 VIL1P09327 827 aaKnown RBP27.47■■□□□ 1.99
PKN1-210ENST00000587429 IGHMBP2P38935 993 aaKnown RBP27.47■■□□□ 1.99
PKN1-210ENST00000587429 SLC4A10Q6U841 1118 aa27.47■■□□□ 1.99
PKN1-210ENST00000587429 PGAP2Q9UHJ9 254 aa27.47■■□□□ 1.99
PKN1-210ENST00000587429 EGFRP00533 1210 aa27.46■■□□□ 1.99
PKN1-210ENST00000587429 MRPL50Q8N5N7 158 aaKnown RBP27.46■■□□□ 1.99
PKN1-210ENST00000587429 VEGFBP49765 207 aa27.45■■□□□ 1.98
PKN1-210ENST00000587429 CCT4P50991 539 aaKnown RBP27.45■■□□□ 1.98
PKN1-210ENST00000587429 TBC1D10BQ4KMP7 808 aaPredicted RBP27.45■■□□□ 1.98
PKN1-210ENST00000587429 EPHA10Q5JZY3 1008 aa27.45■■□□□ 1.98
PKN1-210ENST00000587429 CST9Q5W186 159 aa27.45■■□□□ 1.98
PKN1-210ENST00000587429 GLIS2Q9BZE0 524 aaPredicted RBP27.45■■□□□ 1.98
PKN1-210ENST00000587429 CCER2I3L3R5 266 aa27.44■■□□□ 1.98
PKN1-210ENST00000587429 HSPA1AP0DMV8 641 aaKnown RBP27.44■■□□□ 1.98
PKN1-210ENST00000587429 HSPA1BP0DMV9 641 aaKnown RBP27.44■■□□□ 1.98
PKN1-210ENST00000587429 RPS12P25398 132 aaKnown RBP27.44■■□□□ 1.98
PKN1-210ENST00000587429 RBM26Q5T8P6 1007 aaKnown RBP27.44■■□□□ 1.98
PKN1-210ENST00000587429 ABT1Q9ULW3 272 aaKnown RBP27.44■■□□□ 1.98
PKN1-210ENST00000587429 GRM8O00222 908 aa27.43■■□□□ 1.98
PKN1-210ENST00000587429 TXNRD3Q86VQ6 643 aa27.43■■□□□ 1.98
PKN1-210ENST00000587429 ZC3H15Q8WU90 426 aaKnown RBP27.43■■□□□ 1.98
PKN1-210ENST00000587429 MPHOSPH8Q99549 860 aa27.43■■□□□ 1.98
PKN1-210ENST00000587429 PSME4Q14997 1843 aa27.43■■□□□ 1.98
PKN1-210ENST00000587429 ANKRD18BA2A2Z9 1011 aa27.42■■□□□ 1.98
PKN1-210ENST00000587429 ALDH1L1O75891 902 aa27.42■■□□□ 1.98
PKN1-210ENST00000587429 DEFB115Q30KQ5 88 aa27.42■■□□□ 1.98
PKN1-210ENST00000587429 LMBR1LQ6UX01 489 aa27.42■■□□□ 1.98
PKN1-210ENST00000587429 SSH1Q8WYL5 1049 aa27.42■■□□□ 1.98
PKN1-210ENST00000587429 SRCIN1Q9C0H9 1055 aa27.42■■□□□ 1.98
PKN1-210ENST00000587429 C9orf78Q9NZ63 289 aaPredicted RBP27.42■■□□□ 1.98
PKN1-210ENST00000587429 CHMP3Q9Y3E7 222 aa27.42■■□□□ 1.98
PKN1-210ENST00000587429 RASSF10A6NK89 507 aa27.41■■□□□ 1.98
PKN1-210ENST00000587429 MED23Q9ULK4 1368 aa27.4■■□□□ 1.98
PKN1-210ENST00000587429 KLRK1P26718 216 aa27.4■■□□□ 1.98
PKN1-210ENST00000587429 RSBN1LQ6PCB5 846 aaPredicted RBP27.4■■□□□ 1.98
PKN1-210ENST00000587429 DLK2Q6UY11 383 aa27.4■■□□□ 1.98
PKN1-210ENST00000587429 PODNQ7Z5L7 613 aa27.4■■□□□ 1.98
PKN1-210ENST00000587429 LEMD3Q9Y2U8 911 aa27.4■■□□□ 1.98
PKN1-210ENST00000587429 CHRNDQ07001 517 aa27.39■■□□□ 1.98
PKN1-210ENST00000587429 IFIT5Q13325 482 aaKnown RBP27.39■■□□□ 1.98
PKN1-210ENST00000587429 USP48Q86UV5 1035 aa27.39■■□□□ 1.98
PKN1-210ENST00000587429 ANKRD2Q9GZV1 360 aa27.39■■□□□ 1.98
PKN1-210ENST00000587429 ZNF804BA4D1E1 1349 aa27.39■■□□□ 1.97
PKN1-210ENST00000587429 SNAP23O00161 211 aa27.38■■□□□ 1.97
PKN1-210ENST00000587429 CDC37L1Q7L3B6 337 aa27.38■■□□□ 1.97
PKN1-210ENST00000587429 TRMT2AQ8IZ69 625 aaKnown RBP27.38■■□□□ 1.97
PKN1-210ENST00000587429 HELBQ8NG08 1087 aaPredicted RBP27.38■■□□□ 1.97
PKN1-210ENST00000587429 ZNF594Q96JF6 807 aaPredicted RBP27.38■■□□□ 1.97
PKN1-210ENST00000587429 USP17L3A6NCW0 530 aa27.37■■□□□ 1.97
PKN1-210ENST00000587429 USP17L4A6NCW7 530 aa27.37■■□□□ 1.97
PKN1-210ENST00000587429 CELF2O95319 508 aaKnown RBP27.37■■□□□ 1.97
PKN1-210ENST00000587429 COL13A1Q5TAT6 717 aaPredicted RBP27.37■■□□□ 1.97
PKN1-210ENST00000587429 USP17L1Q7RTZ2 530 aa27.37■■□□□ 1.97
PKN1-210ENST00000587429 AGBL3Q8NEM8 1001 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms