RNA–Protein interactions for RNA: ENST00000587376.5

ERCC2-210, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-210ENST00000587376 LINS1Q8NG48 757 aa19.62■□□□□ 0.73
ERCC2-210ENST00000587376 GCKRQ14397 625 aa19.61■□□□□ 0.73
ERCC2-210ENST00000587376 ABT1Q9ULW3 272 aaKnown RBP19.61■□□□□ 0.73
ERCC2-210ENST00000587376 LTBP1Q14766 1721 aa19.61■□□□□ 0.73
ERCC2-210ENST00000587376 RPS12P25398 132 aaKnown RBP19.6■□□□□ 0.73
ERCC2-210ENST00000587376 IGHMBP2P38935 993 aaKnown RBP19.6■□□□□ 0.73
ERCC2-210ENST00000587376 DOK7Q18PE1 504 aa19.6■□□□□ 0.73
ERCC2-210ENST00000587376 TTLL11Q8NHH1 800 aa19.6■□□□□ 0.73
ERCC2-210ENST00000587376 CNOT7Q9UIV1 285 aaKnown RBP19.6■□□□□ 0.73
ERCC2-210ENST00000587376 CNTNAP1P78357 1384 aa19.59■□□□□ 0.73
ERCC2-210ENST00000587376 YDJCA8MPS7 323 aa19.59■□□□□ 0.73
ERCC2-210ENST00000587376 H7C1W4 665 aa19.59■□□□□ 0.73
ERCC2-210ENST00000587376 PSMD14O00487 310 aa19.59■□□□□ 0.73
ERCC2-210ENST00000587376 ATP2B4P23634 1241 aa19.59■□□□□ 0.73
ERCC2-210ENST00000587376 DPF2Q92785 391 aa19.59■□□□□ 0.73
ERCC2-210ENST00000587376 BSDC1Q9NW68 430 aaPredicted RBP19.59■□□□□ 0.73
ERCC2-210ENST00000587376 RTL9Q8NET4 1388 aa19.58■□□□□ 0.73
ERCC2-210ENST00000587376 MICALL2Q8IY33 904 aa19.58■□□□□ 0.72
ERCC2-210ENST00000587376 ZC3H15Q8WU90 426 aaKnown RBP19.58■□□□□ 0.72
ERCC2-210ENST00000587376 GREM2Q9H772 168 aa19.58■□□□□ 0.72
ERCC2-210ENST00000587376 DEFB115Q30KQ5 88 aa19.57■□□□□ 0.72
ERCC2-210ENST00000587376 IFFO2Q5TF58 517 aa19.57■□□□□ 0.72
ERCC2-210ENST00000587376 GPR101Q96P66 508 aaPredicted RBP19.57■□□□□ 0.72
ERCC2-210ENST00000587376 MPHOSPH8Q99549 860 aa19.57■□□□□ 0.72
ERCC2-210ENST00000587376 HSPA1AP0DMV8 641 aaKnown RBP19.56■□□□□ 0.72
ERCC2-210ENST00000587376 HSPA1BP0DMV9 641 aaKnown RBP19.56■□□□□ 0.72
ERCC2-210ENST00000587376 PLA2G12BQ9BX93 195 aa19.56■□□□□ 0.72
ERCC2-210ENST00000587376 SPINK5Q9NQ38 1064 aaPredicted RBP19.56■□□□□ 0.72
ERCC2-210ENST00000587376 ZBTB12Q9Y330 459 aaPredicted RBP19.56■□□□□ 0.72
ERCC2-210ENST00000587376 COL4A1P02462 1669 aa19.56■□□□□ 0.72
ERCC2-210ENST00000587376 ITGA6P23229 1130 aa19.55■□□□□ 0.72
ERCC2-210ENST00000587376 PAXIP1Q6ZW49 1069 aaPredicted RBP19.55■□□□□ 0.72
ERCC2-210ENST00000587376 AIDAQ96BJ3 306 aa19.55■□□□□ 0.72
ERCC2-210ENST00000587376 SPEF2Q9C093 1822 aa19.54■□□□□ 0.72
ERCC2-210ENST00000587376 CDC37L1Q7L3B6 337 aa19.54■□□□□ 0.72
ERCC2-210ENST00000587376 ANKRD2Q9GZV1 360 aa19.54■□□□□ 0.72
ERCC2-210ENST00000587376 MINPP1Q9UNW1 487 aa19.54■□□□□ 0.72
ERCC2-210ENST00000587376 ANKRD18BA2A2Z9 1011 aa19.53■□□□□ 0.72
ERCC2-210ENST00000587376 RASSF10A6NK89 507 aa19.53■□□□□ 0.72
ERCC2-210ENST00000587376 E9PSI1 815 aa19.53■□□□□ 0.72
ERCC2-210ENST00000587376 F6X3S4 739 aa19.53■□□□□ 0.72
ERCC2-210ENST00000587376 KCNJ4P48050 445 aa19.53■□□□□ 0.72
ERCC2-210ENST00000587376 VEGFBP49765 207 aa19.53■□□□□ 0.72
ERCC2-210ENST00000587376 SLC4A10Q6U841 1118 aa19.53■□□□□ 0.72
ERCC2-210ENST00000587376 PODNQ7Z5L7 613 aa19.53■□□□□ 0.72
ERCC2-210ENST00000587376 C9orf78Q9NZ63 289 aaPredicted RBP19.53■□□□□ 0.72
ERCC2-210ENST00000587376 CHMP3Q9Y3E7 222 aa19.53■□□□□ 0.72
ERCC2-210ENST00000587376 TRPM7Q96QT4 1865 aa19.53■□□□□ 0.72
ERCC2-210ENST00000587376 TRAF5O00463 557 aa19.52■□□□□ 0.72
ERCC2-210ENST00000587376 VIL1P09327 827 aaKnown RBP19.52■□□□□ 0.72
ERCC2-210ENST00000587376 ECE1P42892 770 aa19.52■□□□□ 0.72
ERCC2-210ENST00000587376 CCT4P50991 539 aaKnown RBP19.52■□□□□ 0.72
ERCC2-210ENST00000587376 IFIT5Q13325 482 aaKnown RBP19.52■□□□□ 0.72
ERCC2-210ENST00000587376 TRPM4Q8TD43 1214 aa19.52■□□□□ 0.72
ERCC2-210ENST00000587376 DCPSQ96C86 337 aaKnown RBP19.52■□□□□ 0.72
ERCC2-210ENST00000587376 PGAP2Q9UHJ9 254 aa19.52■□□□□ 0.72
ERCC2-210ENST00000587376 LEMD3Q9Y2U8 911 aa19.52■□□□□ 0.72
ERCC2-210ENST00000587376 MED23Q9ULK4 1368 aa19.52■□□□□ 0.72
ERCC2-210ENST00000587376 CELF2O95319 508 aaKnown RBP19.51■□□□□ 0.71
ERCC2-210ENST00000587376 FAM161AQ3B820 660 aa19.51■□□□□ 0.71
ERCC2-210ENST00000587376 TBC1D10BQ4KMP7 808 aaPredicted RBP19.51■□□□□ 0.71
ERCC2-210ENST00000587376 BEND3Q5T5X7 828 aa19.51■□□□□ 0.71
ERCC2-210ENST00000587376 RBM26Q5T8P6 1007 aaKnown RBP19.51■□□□□ 0.71
ERCC2-210ENST00000587376 AGBL3Q8NEM8 1001 aa19.51■□□□□ 0.71
ERCC2-210ENST00000587376 SRCIN1Q9C0H9 1055 aa19.51■□□□□ 0.71
ERCC2-210ENST00000587376 ZNF408Q9H9D4 720 aa19.51■□□□□ 0.71
ERCC2-210ENST00000587376 KCNQ5Q9NR82 932 aa19.51■□□□□ 0.71
ERCC2-210ENST00000587376 USP17L3A6NCW0 530 aa19.5■□□□□ 0.71
ERCC2-210ENST00000587376 USP17L4A6NCW7 530 aa19.5■□□□□ 0.71
ERCC2-210ENST00000587376 CSF1RP07333 972 aa19.5■□□□□ 0.71
ERCC2-210ENST00000587376 KIF4BQ2VIQ3 1234 aa19.5■□□□□ 0.71
ERCC2-210ENST00000587376 TAF7LQ5H9L4 462 aa19.5■□□□□ 0.71
ERCC2-210ENST00000587376 RSBN1LQ6PCB5 846 aaPredicted RBP19.5■□□□□ 0.71
ERCC2-210ENST00000587376 USP17L1Q7RTZ2 530 aa19.5■□□□□ 0.71
ERCC2-210ENST00000587376 SAMD7Q7Z3H4 446 aa19.5■□□□□ 0.71
ERCC2-210ENST00000587376 GLIS2Q9BZE0 524 aaPredicted RBP19.5■□□□□ 0.71
ERCC2-210ENST00000587376 ZNF521Q96K83 1311 aa19.5■□□□□ 0.71
ERCC2-210ENST00000587376 GRM8O00222 908 aa19.49■□□□□ 0.71
ERCC2-210ENST00000587376 ALDH1L1O75891 902 aa19.49■□□□□ 0.71
ERCC2-210ENST00000587376 HIRAP54198 1017 aaPredicted RBP19.49■□□□□ 0.71
ERCC2-210ENST00000587376 CASP7P55210 303 aa19.49■□□□□ 0.71
ERCC2-210ENST00000587376 GRM1Q13255 1194 aa19.49■□□□□ 0.71
ERCC2-210ENST00000587376 CCDC57Q2TAC2 916 aa19.49■□□□□ 0.71
ERCC2-210ENST00000587376 FBXW7Q969H0 707 aa19.49■□□□□ 0.71
ERCC2-210ENST00000587376 PCNTO95613 3336 aa19.49■□□□□ 0.71
ERCC2-210ENST00000587376 WDR33Q9C0J8 1336 aaKnown RBP19.49■□□□□ 0.71
ERCC2-210ENST00000587376 SHTN1A0MZ66 631 aa19.48■□□□□ 0.71
ERCC2-210ENST00000587376 MAP2K1Q02750 393 aaPredicted RBP19.48■□□□□ 0.71
ERCC2-210ENST00000587376 KRT26Q7Z3Y9 468 aa19.48■□□□□ 0.71
ERCC2-210ENST00000587376 BEGAINQ9BUH8 593 aa19.48■□□□□ 0.71
ERCC2-210ENST00000587376 COA1Q9GZY4 146 aa19.48■□□□□ 0.71
ERCC2-210ENST00000587376 TLL2Q9Y6L7 1015 aa19.48■□□□□ 0.71
ERCC2-210ENST00000587376 ZNF804BA4D1E1 1349 aa19.48■□□□□ 0.71
ERCC2-210ENST00000587376 FMR1Q06787 632 aaKnown RBP eCLIP19.47■□□□□ 0.71
ERCC2-210ENST00000587376 CST9Q5W186 159 aa19.47■□□□□ 0.71
ERCC2-210ENST00000587376 USP48Q86UV5 1035 aa19.47■□□□□ 0.71
ERCC2-210ENST00000587376 SULF1Q8IWU6 871 aa19.47■□□□□ 0.71
ERCC2-210ENST00000587376 OGFOD1Q8N543 542 aa19.47■□□□□ 0.71
ERCC2-210ENST00000587376 MYO3BQ8WXR4 1341 aa19.47■□□□□ 0.71
ERCC2-210ENST00000587376 USP17L8P0C7I0 530 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms