RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 SLC10A5Q5PT55 438 aa24.04■■□□□ 1.44
TRIM47-204ENST00000587339 IGHMBP2P38935 993 aaKnown RBP24.03■■□□□ 1.44
TRIM47-204ENST00000587339 KIAA1211Q6ZU35 1233 aa24.03■■□□□ 1.44
TRIM47-204ENST00000587339 HSCBQ8IWL3 235 aa24.03■■□□□ 1.44
TRIM47-204ENST00000587339 PROM2Q8N271 834 aa24.03■■□□□ 1.44
TRIM47-204ENST00000587339 NDUFB9Q9Y6M9 179 aa24.03■■□□□ 1.44
TRIM47-204ENST00000587339 IFIT1P09914 478 aaKnown RBP24.02■■□□□ 1.44
TRIM47-204ENST00000587339 SSFA2P28290 1259 aa24.02■■□□□ 1.44
TRIM47-204ENST00000587339 RABEP1Q15276 862 aa24.02■■□□□ 1.44
TRIM47-204ENST00000587339 SF3B3Q15393 1217 aaKnown RBP24.02■■□□□ 1.44
TRIM47-204ENST00000587339 SNX21Q969T3 373 aa24.02■■□□□ 1.44
TRIM47-204ENST00000587339 COL24A1Q17RW2 1714 aa24.02■■□□□ 1.44
TRIM47-204ENST00000587339 PLSCR1O15162 318 aa24.02■■□□□ 1.44
TRIM47-204ENST00000587339 APBA3O96018 575 aa24.02■■□□□ 1.44
TRIM47-204ENST00000587339 ADORA1P30542 326 aa24.02■■□□□ 1.44
TRIM47-204ENST00000587339 FBXO41Q8TF61 875 aa24.02■■□□□ 1.44
TRIM47-204ENST00000587339 CDC5LQ99459 802 aaKnown RBP24.02■■□□□ 1.44
TRIM47-204ENST00000587339 RGS17Q9UGC6 210 aaPredicted RBP24.02■■□□□ 1.44
TRIM47-204ENST00000587339 ABCC12Q96J65 1359 aa24.01■■□□□ 1.43
TRIM47-204ENST00000587339 TTC39AQ5SRH9 613 aa24.01■■□□□ 1.43
TRIM47-204ENST00000587339 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.01■■□□□ 1.43
TRIM47-204ENST00000587339 UBR3Q6ZT12 1888 aa24.01■■□□□ 1.43
TRIM47-204ENST00000587339 DDX46Q7L014 1031 aaKnown RBP24■■□□□ 1.43
TRIM47-204ENST00000587339 PAG1Q9NWQ8 432 aa24■■□□□ 1.43
TRIM47-204ENST00000587339 NMIQ13287 307 aaPredicted RBP24■■□□□ 1.43
TRIM47-204ENST00000587339 C3orf67Q6ZVT6 689 aa24■■□□□ 1.43
TRIM47-204ENST00000587339 FAM227BQ96M60 508 aa24■■□□□ 1.43
TRIM47-204ENST00000587339 NLRP3Q96P20 1036 aa24■■□□□ 1.43
TRIM47-204ENST00000587339 RAD50Q92878 1312 aa24■■□□□ 1.43
TRIM47-204ENST00000587339 CARMIL3Q8ND23 1372 aa24■■□□□ 1.43
TRIM47-204ENST00000587339 NPHP1O15259 732 aa23.99■■□□□ 1.43
TRIM47-204ENST00000587339 PUM3Q15397 648 aaKnown RBP23.99■■□□□ 1.43
TRIM47-204ENST00000587339 LSG1Q9H089 658 aaKnown RBP23.99■■□□□ 1.43
TRIM47-204ENST00000587339 RFX7Q2KHR2 1363 aa23.99■■□□□ 1.43
TRIM47-204ENST00000587339 GOLIM4O00461 696 aa23.98■■□□□ 1.43
TRIM47-204ENST00000587339 NFIXQ14938 502 aa23.98■■□□□ 1.43
TRIM47-204ENST00000587339 KBTBD3Q8NAB2 608 aa23.98■■□□□ 1.43
TRIM47-204ENST00000587339 HELBQ8NG08 1087 aaPredicted RBP23.98■■□□□ 1.43
TRIM47-204ENST00000587339 ANAPC15P60006 121 aa23.98■■□□□ 1.43
TRIM47-204ENST00000587339 LPIN2Q92539 896 aa23.98■■□□□ 1.43
TRIM47-204ENST00000587339 POTEAQ6S8J7 498 aa23.97■■□□□ 1.43
TRIM47-204ENST00000587339 ANKRD18AQ8IVF6 992 aa23.97■■□□□ 1.43
TRIM47-204ENST00000587339 A0A0D9SFI3 127 aa23.96■■□□□ 1.43
TRIM47-204ENST00000587339 GYS1P13807 737 aa23.96■■□□□ 1.43
TRIM47-204ENST00000587339 HSPA4P34932 840 aa23.96■■□□□ 1.43
TRIM47-204ENST00000587339 FKBP4Q02790 459 aaKnown RBP eCLIP23.96■■□□□ 1.43
TRIM47-204ENST00000587339 FGFR2P21802 821 aa23.95■■□□□ 1.42
TRIM47-204ENST00000587339 TICAM2Q86XR7 235 aa23.95■■□□□ 1.42
TRIM47-204ENST00000587339 CCDC24Q8N4L8 307 aa23.95■■□□□ 1.42
TRIM47-204ENST00000587339 SNRKQ9NRH2 765 aa23.95■■□□□ 1.42
TRIM47-204ENST00000587339 PALD1Q9ULE6 856 aa23.95■■□□□ 1.42
TRIM47-204ENST00000587339 TAF5LO75529 589 aa23.94■■□□□ 1.42
TRIM47-204ENST00000587339 CD2BP2O95400 341 aaKnown RBP23.94■■□□□ 1.42
TRIM47-204ENST00000587339 SLC5A1P13866 664 aa23.94■■□□□ 1.42
TRIM47-204ENST00000587339 CHRNDQ07001 517 aa23.94■■□□□ 1.42
TRIM47-204ENST00000587339 CNBD1Q8NA66 436 aa23.94■■□□□ 1.42
TRIM47-204ENST00000587339 ZNF512BQ96KM6 892 aaPredicted RBP23.94■■□□□ 1.42
TRIM47-204ENST00000587339 BSDC1Q9NW68 430 aaPredicted RBP23.93■■□□□ 1.42
TRIM47-204ENST00000587339 TFCP2L1Q9NZI6 479 aa23.93■■□□□ 1.42
TRIM47-204ENST00000587339 SPEF2Q9C093 1822 aa23.93■■□□□ 1.42
TRIM47-204ENST00000587339 CCDC171Q6TFL3 1326 aa23.93■■□□□ 1.42
TRIM47-204ENST00000587339 ST18O60284 1047 aa23.92■■□□□ 1.42
TRIM47-204ENST00000587339 MED23Q9ULK4 1368 aa23.92■■□□□ 1.42
TRIM47-204ENST00000587339 PTH1RQ03431 593 aa23.92■■□□□ 1.42
TRIM47-204ENST00000587339 SCARF1Q14162 830 aa23.92■■□□□ 1.42
TRIM47-204ENST00000587339 CCDC102BQ68D86 513 aa23.92■■□□□ 1.42
TRIM47-204ENST00000587339 ANTXR1Q9H6X2 564 aa23.92■■□□□ 1.42
TRIM47-204ENST00000587339 COL4A1P02462 1669 aa23.91■■□□□ 1.42
TRIM47-204ENST00000587339 CASZ1Q86V15 1759 aa23.91■■□□□ 1.42
TRIM47-204ENST00000587339 K7ELQ4 463 aaPredicted RBP23.91■■□□□ 1.42
TRIM47-204ENST00000587339 CELF1Q92879 486 aaKnown RBP23.91■■□□□ 1.42
TRIM47-204ENST00000587339 IL17RAQ96F46 866 aa23.91■■□□□ 1.42
TRIM47-204ENST00000587339 ZAP70P43403 619 aa23.9■■□□□ 1.42
TRIM47-204ENST00000587339 SLKQ9H2G2 1235 aaPredicted RBP23.9■■□□□ 1.42
TRIM47-204ENST00000587339 MCAMP43121 646 aa23.9■■□□□ 1.42
TRIM47-204ENST00000587339 ZNF827Q17R98 1081 aa23.9■■□□□ 1.42
TRIM47-204ENST00000587339 LRRFIP1Q32MZ4 808 aaKnown RBP23.9■■□□□ 1.42
TRIM47-204ENST00000587339 SPRYD3Q8NCJ5 442 aa23.9■■□□□ 1.42
TRIM47-204ENST00000587339 SNAP23O00161 211 aa23.89■■□□□ 1.42
TRIM47-204ENST00000587339 CHGBP05060 677 aa23.89■■□□□ 1.42
TRIM47-204ENST00000587339 UQCRFS1P1P0C7P4 283 aa23.89■■□□□ 1.42
TRIM47-204ENST00000587339 PHKA1P46020 1223 aa23.89■■□□□ 1.42
TRIM47-204ENST00000587339 RPS8P62241 208 aaKnown RBP23.89■■□□□ 1.42
TRIM47-204ENST00000587339 MCMDC2Q4G0Z9 681 aa23.89■■□□□ 1.42
TRIM47-204ENST00000587339 ZNF589Q86UQ0 364 aaPredicted RBP23.89■■□□□ 1.42
TRIM47-204ENST00000587339 MAP4K1Q92918 833 aa23.89■■□□□ 1.42
TRIM47-204ENST00000587339 AKT1S1Q96B36 256 aa23.89■■□□□ 1.42
TRIM47-204ENST00000587339 ARID4AP29374 1257 aaPredicted RBP23.88■■□□□ 1.41
TRIM47-204ENST00000587339 TM4SF1P30408 202 aa23.88■■□□□ 1.41
TRIM47-204ENST00000587339 PRR5LQ6MZQ0 368 aa23.88■■□□□ 1.41
TRIM47-204ENST00000587339 PI16Q6UXB8 463 aa23.88■■□□□ 1.41
TRIM47-204ENST00000587339 ARAP2Q8WZ64 1704 aa23.88■■□□□ 1.41
TRIM47-204ENST00000587339 KCNJ4P48050 445 aa23.88■■□□□ 1.41
TRIM47-204ENST00000587339 NEK4P51957 841 aa23.88■■□□□ 1.41
TRIM47-204ENST00000587339 MINPP1Q9UNW1 487 aa23.88■■□□□ 1.41
TRIM47-204ENST00000587339 SERPINB2P05120 415 aa23.87■■□□□ 1.41
TRIM47-204ENST00000587339 HELLSQ9NRZ9 838 aa23.87■■□□□ 1.41
TRIM47-204ENST00000587339 SNX14Q9Y5W7 946 aa23.87■■□□□ 1.41
TRIM47-204ENST00000587339 RNF113AO15541 343 aaKnown RBP23.86■■□□□ 1.41
TRIM47-204ENST00000587339 SEC62Q99442 399 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms