RNA–Protein interactions for RNA: ENST00000587062.1

VAT1-203, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-203ENST00000587062 ANKRD18BA2A2Z9 1011 aa25.63■■□□□ 1.69
VAT1-203ENST00000587062 UFL1O94874 794 aa25.63■■□□□ 1.69
VAT1-203ENST00000587062 ATP2B4P23634 1241 aa25.63■■□□□ 1.69
VAT1-203ENST00000587062 CXCL9Q07325 125 aa25.63■■□□□ 1.69
VAT1-203ENST00000587062 BCL2L13Q9BXK5 485 aa25.63■■□□□ 1.69
VAT1-203ENST00000587062 CSF1RP07333 972 aa25.62■■□□□ 1.69
VAT1-203ENST00000587062 ITGA6P23229 1130 aa25.62■■□□□ 1.69
VAT1-203ENST00000587062 CASP7P55210 303 aa25.62■■□□□ 1.69
VAT1-203ENST00000587062 SSH1Q8WYL5 1049 aa25.62■■□□□ 1.69
VAT1-203ENST00000587062 SMC4Q9NTJ3 1288 aa25.62■■□□□ 1.69
VAT1-203ENST00000587062 CHMP3Q9Y3E7 222 aa25.62■■□□□ 1.69
VAT1-203ENST00000587062 IFIT5Q13325 482 aaKnown RBP25.61■■□□□ 1.69
VAT1-203ENST00000587062 ANKRD2Q9GZV1 360 aa25.6■■□□□ 1.69
VAT1-203ENST00000587062 COL4A5P29400 1685 aa25.6■■□□□ 1.69
VAT1-203ENST00000587062 RAD17O75943 681 aa25.59■■□□□ 1.69
VAT1-203ENST00000587062 USP50Q70EL3 339 aaPredicted RBP25.59■■□□□ 1.69
VAT1-203ENST00000587062 MINPP1Q9UNW1 487 aa25.59■■□□□ 1.69
VAT1-203ENST00000587062 ECE2O60344 883 aa25.58■■□□□ 1.69
VAT1-203ENST00000587062 CCDC57Q2TAC2 916 aa25.58■■□□□ 1.69
VAT1-203ENST00000587062 TAF7LQ5H9L4 462 aa25.58■■□□□ 1.69
VAT1-203ENST00000587062 DBNDD1Q9H9R9 158 aa25.58■■□□□ 1.69
VAT1-203ENST00000587062 DUOX1Q9NRD9 1551 aa25.57■■□□□ 1.68
VAT1-203ENST00000587062 SCNN1DP51172 638 aa25.57■■□□□ 1.68
VAT1-203ENST00000587062 FAM161AQ3B820 660 aa25.57■■□□□ 1.68
VAT1-203ENST00000587062 ADARB2Q9NS39 739 aaKnown RBP25.57■■□□□ 1.68
VAT1-203ENST00000587062 GPRC5DQ9NZD1 345 aa25.57■■□□□ 1.68
VAT1-203ENST00000587062 LEMD3Q9Y2U8 911 aa25.57■■□□□ 1.68
VAT1-203ENST00000587062 H7C1D1 291 aa25.56■■□□□ 1.68
VAT1-203ENST00000587062 EPS15P42566 896 aa25.56■■□□□ 1.68
VAT1-203ENST00000587062 HNRNPUQ00839 825 aaKnown RBP eCLIP25.56■■□□□ 1.68
VAT1-203ENST00000587062 DOK7Q18PE1 504 aa25.56■■□□□ 1.68
VAT1-203ENST00000587062 POTEIP0CG38 1075 aa25.55■■□□□ 1.68
VAT1-203ENST00000587062 POTEJP0CG39 1038 aa25.55■■□□□ 1.68
VAT1-203ENST00000587062 GMPSP49915 693 aaPredicted RBP25.55■■□□□ 1.68
VAT1-203ENST00000587062 CCT4P50991 539 aaKnown RBP25.55■■□□□ 1.68
VAT1-203ENST00000587062 FOXO4P98177 505 aa25.55■■□□□ 1.68
VAT1-203ENST00000587062 LMBR1LQ6UX01 489 aa25.55■■□□□ 1.68
VAT1-203ENST00000587062 RPS12P25398 132 aaKnown RBP25.54■■□□□ 1.68
VAT1-203ENST00000587062 KCNJ4P48050 445 aa25.54■■□□□ 1.68
VAT1-203ENST00000587062 DPF2Q92785 391 aa25.54■■□□□ 1.68
VAT1-203ENST00000587062 YDJCA8MPS7 323 aa25.53■■□□□ 1.68
VAT1-203ENST00000587062 PODNQ7Z5L7 613 aa25.53■■□□□ 1.68
VAT1-203ENST00000587062 API5Q9BZZ5 524 aaKnown RBP25.53■■□□□ 1.68
VAT1-203ENST00000587062 HDAC5Q9UQL6 1122 aa25.53■■□□□ 1.68
VAT1-203ENST00000587062 COL4A1P02462 1669 aa25.52■■□□□ 1.68
VAT1-203ENST00000587062 PSMD14O00487 310 aa25.52■■□□□ 1.68
VAT1-203ENST00000587062 BRPF1P55201 1214 aaPredicted RBP25.52■■□□□ 1.68
VAT1-203ENST00000587062 CNTROBQ8N137 903 aa25.52■■□□□ 1.68
VAT1-203ENST00000587062 CNOT7Q9UIV1 285 aaKnown RBP25.52■■□□□ 1.68
VAT1-203ENST00000587062 LTBP1Q14766 1721 aa25.51■■□□□ 1.68
VAT1-203ENST00000587062 GPR101Q96P66 508 aaPredicted RBP25.51■■□□□ 1.67
VAT1-203ENST00000587062 MED23Q9ULK4 1368 aa25.51■■□□□ 1.67
VAT1-203ENST00000587062 ZNF804BA4D1E1 1349 aa25.5■■□□□ 1.67
VAT1-203ENST00000587062 UTYO14607 1347 aa25.5■■□□□ 1.67
VAT1-203ENST00000587062 LDHAL6AQ6ZMR3 332 aa25.5■■□□□ 1.67
VAT1-203ENST00000587062 KIF16BQ96L93 1317 aa25.5■■□□□ 1.67
VAT1-203ENST00000587062 SPEF2Q9C093 1822 aa25.49■■□□□ 1.67
VAT1-203ENST00000587062 NBPF7P0C2Y1 421 aaPredicted RBP25.49■■□□□ 1.67
VAT1-203ENST00000587062 CHRNDQ07001 517 aa25.49■■□□□ 1.67
VAT1-203ENST00000587062 CNNM1Q9NRU3 951 aa25.49■■□□□ 1.67
VAT1-203ENST00000587062 CREBZFQ9NS37 354 aa25.49■■□□□ 1.67
VAT1-203ENST00000587062 NOB1Q9ULX3 412 aaKnown RBP25.49■■□□□ 1.67
VAT1-203ENST00000587062 IPO8O15397 1037 aaKnown RBP25.48■■□□□ 1.67
VAT1-203ENST00000587062 MAP1SQ66K74 1059 aaPredicted RBP25.48■■□□□ 1.67
VAT1-203ENST00000587062 ZC3H15Q8WU90 426 aaKnown RBP25.48■■□□□ 1.67
VAT1-203ENST00000587062 COA1Q9GZY4 146 aa25.48■■□□□ 1.67
VAT1-203ENST00000587062 VIL1P09327 827 aaKnown RBP25.47■■□□□ 1.67
VAT1-203ENST00000587062 RARSP54136 660 aaKnown RBP25.47■■□□□ 1.67
VAT1-203ENST00000587062 MICALL2Q8IY33 904 aa25.47■■□□□ 1.67
VAT1-203ENST00000587062 KLRG1Q96E93 195 aa25.47■■□□□ 1.67
VAT1-203ENST00000587062 SUCLG2Q96I99 432 aa25.47■■□□□ 1.67
VAT1-203ENST00000587062 ZBTB12Q9Y330 459 aaPredicted RBP25.47■■□□□ 1.67
VAT1-203ENST00000587062 USP17L3A6NCW0 530 aa25.46■■□□□ 1.67
VAT1-203ENST00000587062 USP17L4A6NCW7 530 aa25.46■■□□□ 1.67
VAT1-203ENST00000587062 ITGBL1O95965 494 aaPredicted RBP25.46■■□□□ 1.67
VAT1-203ENST00000587062 EPHA10Q5JZY3 1008 aa25.46■■□□□ 1.67
VAT1-203ENST00000587062 USP17L1Q7RTZ2 530 aa25.46■■□□□ 1.67
VAT1-203ENST00000587062 DNAJC5GQ8N7S2 189 aa25.46■■□□□ 1.67
VAT1-203ENST00000587062 AGBL3Q8NEM8 1001 aa25.46■■□□□ 1.67
VAT1-203ENST00000587062 ARHGAP45Q92619 1136 aa25.46■■□□□ 1.67
VAT1-203ENST00000587062 PASKQ96RG2 1323 aa25.45■■□□□ 1.66
VAT1-203ENST00000587062 TMEM88BA6NKF7 163 aa25.45■■□□□ 1.66
VAT1-203ENST00000587062 HTRA3P83110 453 aa25.44■■□□□ 1.66
VAT1-203ENST00000587062 RSBN1LQ6PCB5 846 aaPredicted RBP25.44■■□□□ 1.66
VAT1-203ENST00000587062 USP44Q9H0E7 712 aa25.44■■□□□ 1.66
VAT1-203ENST00000587062 BICC1Q9H694 974 aaKnown RBP25.44■■□□□ 1.66
VAT1-203ENST00000587062 KCNQ5Q9NR82 932 aa25.44■■□□□ 1.66
VAT1-203ENST00000587062 ADAMTSL1Q8N6G6 1762 aa25.44■■□□□ 1.66
VAT1-203ENST00000587062 UBTFL1P0CB47 393 aaPredicted RBP25.42■■□□□ 1.66
VAT1-203ENST00000587062 RABL6Q3YEC7 729 aaPredicted RBP25.42■■□□□ 1.66
VAT1-203ENST00000587062 ZNF594Q96JF6 807 aaPredicted RBP25.42■■□□□ 1.66
VAT1-203ENST00000587062 MYO3BQ8WXR4 1341 aa25.41■■□□□ 1.66
VAT1-203ENST00000587062 PLIN1O60240 522 aa25.41■■□□□ 1.66
VAT1-203ENST00000587062 MMP14P50281 582 aa25.41■■□□□ 1.66
VAT1-203ENST00000587062 ZNF804AQ7Z570 1209 aa25.41■■□□□ 1.66
VAT1-203ENST00000587062 FBXW7Q969H0 707 aa25.41■■□□□ 1.66
VAT1-203ENST00000587062 TAF5LO75529 589 aa25.4■■□□□ 1.66
VAT1-203ENST00000587062 STRIP1Q5VSL9 837 aa25.4■■□□□ 1.66
VAT1-203ENST00000587062 CDC37L1Q7L3B6 337 aa25.4■■□□□ 1.66
VAT1-203ENST00000587062 OGFOD1Q8N543 542 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms