RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 MX1P20591 662 aa22.63■■□□□ 1.21
RETREG3-205ENST00000586870 CRAMP1Q96RY5 1269 aa22.63■■□□□ 1.21
RETREG3-205ENST00000586870 SF3B3Q15393 1217 aaKnown RBP22.62■■□□□ 1.21
RETREG3-205ENST00000586870 CCDC152Q4G0S7 254 aa22.62■■□□□ 1.21
RETREG3-205ENST00000586870 SOGA3Q5TF21 947 aa22.61■■□□□ 1.21
RETREG3-205ENST00000586870 RHPN1Q8TCX5 695 aa22.61■■□□□ 1.21
RETREG3-205ENST00000586870 CCDC85AQ96PX6 553 aaPredicted RBP22.6■■□□□ 1.21
RETREG3-205ENST00000586870 TBC1D2Q9BYX2 928 aa22.6■■□□□ 1.21
RETREG3-205ENST00000586870 ANKRD31Q8N7Z5 1873 aa22.6■■□□□ 1.21
RETREG3-205ENST00000586870 SUCLG2Q96I99 432 aa22.59■■□□□ 1.21
RETREG3-205ENST00000586870 KIAA1551Q9HCM1 1747 aa22.58■■□□□ 1.21
RETREG3-205ENST00000586870 PPEF1O14829 653 aaPredicted RBP22.58■■□□□ 1.21
RETREG3-205ENST00000586870 BBOX1O75936 387 aa22.58■■□□□ 1.21
RETREG3-205ENST00000586870 CTSWP56202 376 aa22.58■■□□□ 1.21
RETREG3-205ENST00000586870 GRAPQ13588 217 aa22.57■■□□□ 1.2
RETREG3-205ENST00000586870 ERC1Q8IUD2 1116 aa22.57■■□□□ 1.2
RETREG3-205ENST00000586870 GRAPLQ8TC17 118 aaPredicted RBP22.57■■□□□ 1.2
RETREG3-205ENST00000586870 CCDC93Q567U6 631 aa22.57■■□□□ 1.2
RETREG3-205ENST00000586870 KAZALD1Q96I82 304 aa22.57■■□□□ 1.2
RETREG3-205ENST00000586870 IL1RAPL2Q9NP60 686 aa22.57■■□□□ 1.2
RETREG3-205ENST00000586870 CHMP3Q9Y3E7 222 aa22.57■■□□□ 1.2
RETREG3-205ENST00000586870 CASP7P55210 303 aa22.56■■□□□ 1.2
RETREG3-205ENST00000586870 TTLL11Q8NHH1 800 aa22.56■■□□□ 1.2
RETREG3-205ENST00000586870 SNX21Q969T3 373 aa22.56■■□□□ 1.2
RETREG3-205ENST00000586870 PLA2G12BQ9BX93 195 aa22.56■■□□□ 1.2
RETREG3-205ENST00000586870 TNRC6CQ9HCJ0 1690 aaKnown RBP22.55■■□□□ 1.2
RETREG3-205ENST00000586870 NBR1Q14596 966 aa22.55■■□□□ 1.2
RETREG3-205ENST00000586870 CC2D2BQ6DHV5 1058 aa22.55■■□□□ 1.2
RETREG3-205ENST00000586870 OS9Q13438 667 aaPredicted RBP22.54■■□□□ 1.2
RETREG3-205ENST00000586870 RTKN2Q8IZC4 609 aa22.54■■□□□ 1.2
RETREG3-205ENST00000586870 BICC1Q9H694 974 aaKnown RBP22.54■■□□□ 1.2
RETREG3-205ENST00000586870 RPS8P62241 208 aaKnown RBP22.53■■□□□ 1.2
RETREG3-205ENST00000586870 C7orf43Q8WVR3 580 aa22.53■■□□□ 1.2
RETREG3-205ENST00000586870 CDC5LQ99459 802 aaKnown RBP22.53■■□□□ 1.2
RETREG3-205ENST00000586870 SEC31BQ9NQW1 1179 aa22.53■■□□□ 1.2
RETREG3-205ENST00000586870 UTRNP46939 3433 aa22.53■■□□□ 1.2
RETREG3-205ENST00000586870 COL11A2P13942 1736 aaPredicted RBP22.53■■□□□ 1.2
RETREG3-205ENST00000586870 ERC2O15083 957 aa22.53■■□□□ 1.2
RETREG3-205ENST00000586870 REC8O95072 547 aa22.53■■□□□ 1.2
RETREG3-205ENST00000586870 TMC4Q7Z404 712 aa22.53■■□□□ 1.2
RETREG3-205ENST00000586870 ANKRD18AQ8IVF6 992 aa22.53■■□□□ 1.2
RETREG3-205ENST00000586870 HSCBQ8IWL3 235 aa22.53■■□□□ 1.2
RETREG3-205ENST00000586870 CELF1Q92879 486 aaKnown RBP22.53■■□□□ 1.2
RETREG3-205ENST00000586870 KIF2CQ99661 725 aa22.53■■□□□ 1.2
RETREG3-205ENST00000586870 USP26Q9BXU7 913 aa22.53■■□□□ 1.2
RETREG3-205ENST00000586870 ATP6V0A2Q9Y487 856 aa22.53■■□□□ 1.2
RETREG3-205ENST00000586870 GRIPAP1Q4V328 841 aa22.52■■□□□ 1.2
RETREG3-205ENST00000586870 OLFM4Q6UX06 510 aa22.52■■□□□ 1.2
RETREG3-205ENST00000586870 SP8Q8IXZ3 490 aa22.52■■□□□ 1.2
RETREG3-205ENST00000586870 CLASRPQ8N2M8 674 aaKnown RBP22.52■■□□□ 1.2
RETREG3-205ENST00000586870 TAOK3Q9H2K8 898 aa22.52■■□□□ 1.2
RETREG3-205ENST00000586870 GREM2Q9H772 168 aa22.52■■□□□ 1.2
RETREG3-205ENST00000586870 LMBR1LQ6UX01 489 aa22.51■■□□□ 1.19
RETREG3-205ENST00000586870 CHD4Q14839 1912 aa22.51■■□□□ 1.19
RETREG3-205ENST00000586870 TTC41PQ6P2S7 1318 aa22.51■■□□□ 1.19
RETREG3-205ENST00000586870 CSF1RP07333 972 aa22.5■■□□□ 1.19
RETREG3-205ENST00000586870 YY1P25490 414 aa22.5■■□□□ 1.19
RETREG3-205ENST00000586870 RASSF7Q02833 373 aa22.5■■□□□ 1.19
RETREG3-205ENST00000586870 TSHZ3Q63HK5 1081 aa22.5■■□□□ 1.19
RETREG3-205ENST00000586870 DLEC1Q9Y238 1755 aa22.5■■□□□ 1.19
RETREG3-205ENST00000586870 ANKRD18BA2A2Z9 1011 aa22.49■■□□□ 1.19
RETREG3-205ENST00000586870 TRIM6-TRIM34B2RNG4 842 aa22.49■■□□□ 1.19
RETREG3-205ENST00000586870 ITGA6P23229 1130 aa22.49■■□□□ 1.19
RETREG3-205ENST00000586870 IGHMBP2P38935 993 aaKnown RBP22.49■■□□□ 1.19
RETREG3-205ENST00000586870 FOXO4P98177 505 aa22.49■■□□□ 1.19
RETREG3-205ENST00000586870 G3BP1Q13283 466 aaKnown RBP eCLIP22.49■■□□□ 1.19
RETREG3-205ENST00000586870 IFIT5Q13325 482 aaKnown RBP22.49■■□□□ 1.19
RETREG3-205ENST00000586870 CCDC57Q2TAC2 916 aa22.49■■□□□ 1.19
RETREG3-205ENST00000586870 TAF7LQ5H9L4 462 aa22.49■■□□□ 1.19
RETREG3-205ENST00000586870 PI4K2BQ8TCG2 481 aa22.49■■□□□ 1.19
RETREG3-205ENST00000586870 PA2G4Q9UQ80 394 aaKnown RBP22.49■■□□□ 1.19
RETREG3-205ENST00000586870 NFKBIEO00221 500 aa22.48■■□□□ 1.19
RETREG3-205ENST00000586870 LMNB1P20700 586 aa22.48■■□□□ 1.19
RETREG3-205ENST00000586870 FKBP4Q02790 459 aaKnown RBP eCLIP22.48■■□□□ 1.19
RETREG3-205ENST00000586870 EPHA10Q5JZY3 1008 aa22.48■■□□□ 1.19
RETREG3-205ENST00000586870 C9orf131Q5VYM1 1079 aa22.48■■□□□ 1.19
RETREG3-205ENST00000586870 MPNDQ8N594 471 aa22.48■■□□□ 1.19
RETREG3-205ENST00000586870 RILPL2Q969X0 211 aa22.48■■□□□ 1.19
RETREG3-205ENST00000586870 MPHOSPH8Q99549 860 aa22.48■■□□□ 1.19
RETREG3-205ENST00000586870 RNF181Q9P0P0 153 aa22.48■■□□□ 1.19
RETREG3-205ENST00000586870 GOLGB1Q14789 3259 aaKnown RBP22.48■■□□□ 1.19
RETREG3-205ENST00000586870 BRCA1P38398 1863 aaKnown RBP22.47■■□□□ 1.19
RETREG3-205ENST00000586870 RABL6Q3YEC7 729 aaPredicted RBP22.47■■□□□ 1.19
RETREG3-205ENST00000586870 DPP8Q6V1X1 898 aaPredicted RBP22.47■■□□□ 1.19
RETREG3-205ENST00000586870 CHMLP26374 656 aa22.46■■□□□ 1.19
RETREG3-205ENST00000586870 GPATCH3Q96I76 525 aa22.46■■□□□ 1.19
RETREG3-205ENST00000586870 ESYT1Q9BSJ8 1104 aa22.46■■□□□ 1.19
RETREG3-205ENST00000586870 ANTXR1Q9H6X2 564 aa22.46■■□□□ 1.19
RETREG3-205ENST00000586870 NSFL1CQ9UNZ2 370 aaKnown RBP22.46■■□□□ 1.19
RETREG3-205ENST00000586870 SLX4Q8IY92 1834 aa22.46■■□□□ 1.19
RETREG3-205ENST00000586870 DDX60Q8IY21 1712 aaKnown RBP22.46■■□□□ 1.19
RETREG3-205ENST00000586870 GLRX3O76003 335 aaKnown RBP22.46■■□□□ 1.19
RETREG3-205ENST00000586870 RABEP1Q15276 862 aa22.46■■□□□ 1.19
RETREG3-205ENST00000586870 COPRSQ9NQ92 184 aa22.46■■□□□ 1.19
RETREG3-205ENST00000586870 RTL9Q8NET4 1388 aa22.45■■□□□ 1.18
RETREG3-205ENST00000586870 SUPT20HQ8NEM7 779 aa22.45■■□□□ 1.18
RETREG3-205ENST00000586870 ANKIB1Q9P2G1 1089 aa22.45■■□□□ 1.18
RETREG3-205ENST00000586870 LTBP3Q9NS15 1303 aa22.45■■□□□ 1.18
RETREG3-205ENST00000586870 SASH1O94885 1247 aa22.44■■□□□ 1.18
RETREG3-205ENST00000586870 IFIT2P09913 472 aaKnown RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms