RNA–Protein interactions for RNA: ENST00000586869.5

NLE1-203, Transcript of notchless homolog 1, humanhuman

TSL 1 (best) BASIC

Gene NLE1, Length 5,286 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-203ENST00000586869 HOXC9P31274 260 aa20.53■□□□□ 0.88
NLE1-203ENST00000586869 TMX1Q9H3N1 280 aa20.53■□□□□ 0.88
NLE1-203ENST00000586869 CTDP1Q9Y5B0 961 aaPredicted RBP20.53■□□□□ 0.88
NLE1-203ENST00000586869 SBNO1A3KN83 1393 aa20.53■□□□□ 0.88
NLE1-203ENST00000586869 GTF2F1P35269 517 aaKnown RBP eCLIP20.52■□□□□ 0.88
NLE1-203ENST00000586869 CADPS2Q86UW7 1296 aa20.52■□□□□ 0.88
NLE1-203ENST00000586869 CCDC12Q8WUD4 166 aaPredicted RBP20.52■□□□□ 0.88
NLE1-203ENST00000586869 IKQ13123 557 aaPredicted RBP20.52■□□□□ 0.88
NLE1-203ENST00000586869 FKBP15Q5T1M5 1219 aa20.51■□□□□ 0.87
NLE1-203ENST00000586869 SLC27A2O14975 620 aa20.51■□□□□ 0.87
NLE1-203ENST00000586869 ZBTB43O43298 467 aa20.51■□□□□ 0.87
NLE1-203ENST00000586869 SMAP1Q8IYB5 467 aaPredicted RBP20.51■□□□□ 0.87
NLE1-203ENST00000586869 USP19O94966 1318 aa20.51■□□□□ 0.87
NLE1-203ENST00000586869 APOBRQ0VD83 1088 aa20.51■□□□□ 0.87
NLE1-203ENST00000586869 PYM1Q9BRP8 204 aaKnown RBP20.51■□□□□ 0.87
NLE1-203ENST00000586869 SLC39A6Q13433 755 aa20.51■□□□□ 0.87
NLE1-203ENST00000586869 CATIPQ7Z7H3 387 aa20.51■□□□□ 0.87
NLE1-203ENST00000586869 MYO5CQ9NQX4 1742 aa20.51■□□□□ 0.87
NLE1-203ENST00000586869 RANBP6O60518 1105 aaKnown RBP20.5■□□□□ 0.87
NLE1-203ENST00000586869 MFSD6Q6ZSS7 791 aa20.5■□□□□ 0.87
NLE1-203ENST00000586869 BICC1Q9H694 974 aaKnown RBP20.5■□□□□ 0.87
NLE1-203ENST00000586869 PKP1Q13835 747 aa20.5■□□□□ 0.87
NLE1-203ENST00000586869 CLSTN2Q9H4D0 955 aa20.5■□□□□ 0.87
NLE1-203ENST00000586869 ZHX3Q9H4I2 956 aa20.5■□□□□ 0.87
NLE1-203ENST00000586869 PRC1O43663 620 aa20.49■□□□□ 0.87
NLE1-203ENST00000586869 LMOD1P29536 600 aaPredicted RBP20.49■□□□□ 0.87
NLE1-203ENST00000586869 CAVIN4Q5BKX8 364 aa20.49■□□□□ 0.87
NLE1-203ENST00000586869 TEX13AQ9BXU3 409 aaPredicted RBP20.49■□□□□ 0.87
NLE1-203ENST00000586869 USP8P40818 1118 aa20.49■□□□□ 0.87
NLE1-203ENST00000586869 BRAPQ7Z569 592 aa20.49■□□□□ 0.87
NLE1-203ENST00000586869 TM6SF1Q9BZW5 370 aa20.49■□□□□ 0.87
NLE1-203ENST00000586869 FAM160A1Q05DH4 1040 aa20.49■□□□□ 0.87
NLE1-203ENST00000586869 GPT2Q8TD30 523 aa20.49■□□□□ 0.87
NLE1-203ENST00000586869 OGFRQ9NZT2 677 aa20.49■□□□□ 0.87
NLE1-203ENST00000586869 UQCRFS1P1P0C7P4 283 aa20.48■□□□□ 0.87
NLE1-203ENST00000586869 MARCKSP29966 332 aaPredicted RBP20.48■□□□□ 0.87
NLE1-203ENST00000586869 RNF113AO15541 343 aaKnown RBP20.48■□□□□ 0.87
NLE1-203ENST00000586869 SSBP05455 408 aaKnown RBP eCLIP20.48■□□□□ 0.87
NLE1-203ENST00000586869 NLRP5P59047 1200 aa20.48■□□□□ 0.87
NLE1-203ENST00000586869 TFCP2Q12800 502 aa20.48■□□□□ 0.87
NLE1-203ENST00000586869 TAF4BQ92750 862 aa20.48■□□□□ 0.87
NLE1-203ENST00000586869 NGLY1Q96IV0 654 aa20.48■□□□□ 0.87
NLE1-203ENST00000586869 ARFGAP3Q9NP61 516 aa20.48■□□□□ 0.87
NLE1-203ENST00000586869 DDX21Q9NR30 783 aaKnown RBP eCLIP20.48■□□□□ 0.87
NLE1-203ENST00000586869 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.48■□□□□ 0.87
NLE1-203ENST00000586869 V9GYY5 206 aaPredicted RBP20.48■□□□□ 0.87
NLE1-203ENST00000586869 IBTKQ9P2D0 1353 aaPredicted RBP20.48■□□□□ 0.87
NLE1-203ENST00000586869 CD2BP2O95400 341 aaKnown RBP20.47■□□□□ 0.87
NLE1-203ENST00000586869 LLPHQ9BRT6 129 aaKnown RBP20.47■□□□□ 0.87
NLE1-203ENST00000586869 IFNKQ9P0W0 207 aa20.47■□□□□ 0.87
NLE1-203ENST00000586869 USO1O60763 962 aaKnown RBP20.47■□□□□ 0.87
NLE1-203ENST00000586869 PPP1R1BQ9UD71 204 aaPredicted RBP20.47■□□□□ 0.87
NLE1-203ENST00000586869 TRPM1Q7Z4N2 1603 aa20.47■□□□□ 0.87
NLE1-203ENST00000586869 RIOK3O14730 519 aaKnown RBP20.47■□□□□ 0.87
NLE1-203ENST00000586869 GPTP24298 496 aa20.47■□□□□ 0.87
NLE1-203ENST00000586869 LRRC59Q96AG4 307 aaKnown RBP20.47■□□□□ 0.87
NLE1-203ENST00000586869 CENPHQ9H3R5 247 aa20.47■□□□□ 0.87
NLE1-203ENST00000586869 CBX8Q9HC52 389 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 ZNF75DP51815 510 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 SYCP1Q15431 976 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 ODF2Q5BJF6 829 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 CTAGE1Q96RT6 745 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 CLASP1Q7Z460 1538 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 RNMTO43148 476 aaKnown RBP20.46■□□□□ 0.87
NLE1-203ENST00000586869 FAM173BQ6P4H8 233 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 LEO1Q8WVC0 666 aaPredicted RBP20.46■□□□□ 0.87
NLE1-203ENST00000586869 IP6K1Q92551 441 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 TIGD1Q96MW7 591 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 KRT23Q9C075 422 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 CCDC194A0A1B0GVG4 234 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 BMP15O95972 392 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 ZNF287Q9HBT7 754 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 PALD1Q9ULE6 856 aa20.46■□□□□ 0.87
NLE1-203ENST00000586869 NBPF7P0C2Y1 421 aaPredicted RBP20.45■□□□□ 0.86
NLE1-203ENST00000586869 ATP2B3Q16720 1220 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 ARHGEF10O15013 1369 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 N4BP3O15049 544 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 TMTC2Q8N394 836 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 C17orf53Q8N3J3 647 aaPredicted RBP20.45■□□□□ 0.86
NLE1-203ENST00000586869 CCDC191Q8NCU4 936 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 ZSWIM4Q9H7M6 989 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 SHTN1A0MZ66 631 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 ATP2B2Q01814 1243 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 WTAPQ15007 396 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 SSH3Q8TE77 659 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 FAM227BQ96M60 508 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 CNNM2Q9H8M5 875 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 HELLSQ9NRZ9 838 aa20.45■□□□□ 0.86
NLE1-203ENST00000586869 FGFR1OPO95684 399 aaKnown RBP20.44■□□□□ 0.86
NLE1-203ENST00000586869 PAFAH1B1P43034 410 aa20.44■□□□□ 0.86
NLE1-203ENST00000586869 SAMD1Q6SPF0 538 aaPredicted RBP20.44■□□□□ 0.86
NLE1-203ENST00000586869 CHST3Q7LGC8 479 aa20.44■□□□□ 0.86
NLE1-203ENST00000586869 OSBPL3Q9H4L5 887 aa20.44■□□□□ 0.86
NLE1-203ENST00000586869 PREX2Q70Z35 1606 aa20.44■□□□□ 0.86
NLE1-203ENST00000586869 ZNF652Q9Y2D9 606 aa20.44■□□□□ 0.86
NLE1-203ENST00000586869 ERO1AQ96HE7 468 aa20.44■□□□□ 0.86
NLE1-203ENST00000586869 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP20.43■□□□□ 0.86
NLE1-203ENST00000586869 LMAN1P49257 510 aa20.43■□□□□ 0.86
NLE1-203ENST00000586869 SYT10Q6XYQ8 523 aa20.43■□□□□ 0.86
NLE1-203ENST00000586869 MKNK2Q9HBH9 465 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms