RNA–Protein interactions for RNA: ENST00000586134.5

ZNF540-203, Transcript of zinc finger protein 540, humanhuman

TSL 5

Gene ZNF540, Length 2,038 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-203ENST00000586134 AMIGO3Q86WK7 504 aa11.78□□□□□ -0.52
ZNF540-203ENST00000586134 MPNDQ8N594 471 aa11.78□□□□□ -0.52
ZNF540-203ENST00000586134 KIAA1524Q8TCG1 905 aa11.78□□□□□ -0.52
ZNF540-203ENST00000586134 V9GYY5 206 aaPredicted RBP11.78□□□□□ -0.52
ZNF540-203ENST00000586134 TRAPPC3LQ5T215 181 aa11.77□□□□□ -0.52
ZNF540-203ENST00000586134 SRLQ86TD4 932 aa11.77□□□□□ -0.52
ZNF540-203ENST00000586134 ANKRD20A12PQ8NF67 263 aa11.77□□□□□ -0.52
ZNF540-203ENST00000586134 PAIP2Q9BPZ3 127 aaKnown RBP11.77□□□□□ -0.52
ZNF540-203ENST00000586134 RBM42Q9BTD8 480 aaKnown RBP11.77□□□□□ -0.52
ZNF540-203ENST00000586134 LMBRD1Q9NUN5 540 aa11.77□□□□□ -0.52
ZNF540-203ENST00000586134 CEMIPQ8WUJ3 1361 aa11.77□□□□□ -0.53
ZNF540-203ENST00000586134 FCHSD2O94868 740 aa11.77□□□□□ -0.53
ZNF540-203ENST00000586134 YY1P25490 414 aa11.77□□□□□ -0.53
ZNF540-203ENST00000586134 ARID4AP29374 1257 aaPredicted RBP11.77□□□□□ -0.53
ZNF540-203ENST00000586134 TPM4P67936 248 aa11.77□□□□□ -0.53
ZNF540-203ENST00000586134 DNAJC21Q5F1R6 531 aaKnown RBP11.77□□□□□ -0.53
ZNF540-203ENST00000586134 NLGN1Q8N2Q7 840 aa11.77□□□□□ -0.53
ZNF540-203ENST00000586134 LGR6Q9HBX8 967 aa11.77□□□□□ -0.53
ZNF540-203ENST00000586134 KIAA1551Q9HCM1 1747 aa11.76□□□□□ -0.53
ZNF540-203ENST00000586134 GNAT3A8MTJ3 354 aa11.76□□□□□ -0.53
ZNF540-203ENST00000586134 MPHOSPH10O00566 681 aaKnown RBP11.76□□□□□ -0.53
ZNF540-203ENST00000586134 U2SURPO15042 1029 aaKnown RBP11.76□□□□□ -0.53
ZNF540-203ENST00000586134 CTAGE5O15320 804 aa11.76□□□□□ -0.53
ZNF540-203ENST00000586134 GYS2P54840 703 aa11.76□□□□□ -0.53
ZNF540-203ENST00000586134 PDE3AQ14432 1141 aa11.76□□□□□ -0.53
ZNF540-203ENST00000586134 TSGA10IPQ3SY00 556 aa11.76□□□□□ -0.53
ZNF540-203ENST00000586134 IQUBQ8NA54 791 aa11.76□□□□□ -0.53
ZNF540-203ENST00000586134 CALR3Q96L12 384 aaKnown RBP11.76□□□□□ -0.53
ZNF540-203ENST00000586134 MBD3O95983 291 aa11.76□□□□□ -0.53
ZNF540-203ENST00000586134 H0YHG0 523 aa11.75□□□□□ -0.53
ZNF540-203ENST00000586134 HTATSF1O43719 755 aaKnown RBP11.75□□□□□ -0.53
ZNF540-203ENST00000586134 GRIN3BO60391 1043 aa11.75□□□□□ -0.53
ZNF540-203ENST00000586134 CRKLP46109 303 aaKnown RBP11.75□□□□□ -0.53
ZNF540-203ENST00000586134 SARNPP82979 210 aaKnown RBP11.75□□□□□ -0.53
ZNF540-203ENST00000586134 BIRC2Q13490 618 aa11.75□□□□□ -0.53
ZNF540-203ENST00000586134 KRBA2Q6ZNG9 492 aa11.75□□□□□ -0.53
ZNF540-203ENST00000586134 GOLGA5Q8TBA6 731 aa11.75□□□□□ -0.53
ZNF540-203ENST00000586134 TSPY26PQ9H489 355 aa11.75□□□□□ -0.53
ZNF540-203ENST00000586134 BRCA1P38398 1863 aaKnown RBP11.74□□□□□ -0.53
ZNF540-203ENST00000586134 DLG5Q8TDM6 1919 aa11.74□□□□□ -0.53
ZNF540-203ENST00000586134 MSL1Q68DK7 614 aa11.74□□□□□ -0.53
ZNF540-203ENST00000586134 CCDC191Q8NCU4 936 aa11.74□□□□□ -0.53
ZNF540-203ENST00000586134 PPM1EQ8WY54 764 aa11.74□□□□□ -0.53
ZNF540-203ENST00000586134 ARHGEF1Q92888 912 aaKnown RBP11.74□□□□□ -0.53
ZNF540-203ENST00000586134 RRP15Q9Y3B9 282 aaKnown RBP11.74□□□□□ -0.53
ZNF540-203ENST00000586134 ANKRD33BA6NCL7 494 aa11.74□□□□□ -0.53
ZNF540-203ENST00000586134 TRIM66O15016 1216 aa11.74□□□□□ -0.53
ZNF540-203ENST00000586134 PTCD1O75127 700 aaKnown RBP11.74□□□□□ -0.53
ZNF540-203ENST00000586134 CLUAP1Q96AJ1 413 aa11.74□□□□□ -0.53
ZNF540-203ENST00000586134 BORCS6Q96GS4 357 aa11.74□□□□□ -0.53
ZNF540-203ENST00000586134 CFAP44Q96MT7 982 aa11.74□□□□□ -0.53
ZNF540-203ENST00000586134 C10orf71Q711Q0 1435 aa11.73□□□□□ -0.53
ZNF540-203ENST00000586134 NEFHP12036 1026 aa11.73□□□□□ -0.53
ZNF540-203ENST00000586134 GYS1P13807 737 aa11.73□□□□□ -0.53
ZNF540-203ENST00000586134 PRKAR2BP31323 418 aa11.73□□□□□ -0.53
ZNF540-203ENST00000586134 MTA1Q13330 715 aa11.73□□□□□ -0.53
ZNF540-203ENST00000586134 ZSCAN26Q16670 478 aa11.73□□□□□ -0.53
ZNF540-203ENST00000586134 IL17REQ8NFR9 667 aa11.73□□□□□ -0.53
ZNF540-203ENST00000586134 FBXO18Q8NFZ0 1043 aa11.73□□□□□ -0.53
ZNF540-203ENST00000586134 NLGN2Q8NFZ4 835 aa11.73□□□□□ -0.53
ZNF540-203ENST00000586134 SYAP1Q96A49 352 aaPredicted RBP11.73□□□□□ -0.53
ZNF540-203ENST00000586134 TEX13AQ9BXU3 409 aaPredicted RBP11.73□□□□□ -0.53
ZNF540-203ENST00000586134 CCDC87Q9NVE4 849 aa11.73□□□□□ -0.53
ZNF540-203ENST00000586134 ZBTB12Q9Y330 459 aaPredicted RBP11.73□□□□□ -0.53
ZNF540-203ENST00000586134 NRXN2Q9P2S2 1712 aa11.73□□□□□ -0.53
ZNF540-203ENST00000586134 SENP3-EIF4A1A0A087X0R7 540 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 K7ELQ4 463 aaPredicted RBP11.72□□□□□ -0.53
ZNF540-203ENST00000586134 IPO7O95373 1038 aaKnown RBP11.72□□□□□ -0.53
ZNF540-203ENST00000586134 CYP19A1P11511 503 aaPredicted RBP11.72□□□□□ -0.53
ZNF540-203ENST00000586134 ERCC3P19447 782 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 RFC4P35249 363 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 IRX1P78414 480 aaPredicted RBP11.72□□□□□ -0.53
ZNF540-203ENST00000586134 TEFQ10587 303 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 GPR162Q16538 588 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 MAP9Q49MG5 647 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 DUSP27Q5VZP5 1158 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 INTS5Q6P9B9 1019 aaKnown RBP11.72□□□□□ -0.53
ZNF540-203ENST00000586134 MMS22LQ6ZRQ5 1243 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 CCDC112Q8NEF3 446 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 ARFGEF1Q9Y6D6 1849 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 SOS1Q07889 1333 aaPredicted RBP11.72□□□□□ -0.53
ZNF540-203ENST00000586134 USP42Q9H9J4 1324 aaKnown RBP11.72□□□□□ -0.53
ZNF540-203ENST00000586134 CPP00450 1065 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 KMT5BQ4FZB7 885 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 ZC3H12AQ5D1E8 599 aaKnown RBP11.72□□□□□ -0.53
ZNF540-203ENST00000586134 MCTP1Q6DN14 999 aa11.72□□□□□ -0.53
ZNF540-203ENST00000586134 HEG1Q9ULI3 1381 aa11.71□□□□□ -0.53
ZNF540-203ENST00000586134 IVLP07476 585 aa11.71□□□□□ -0.53
ZNF540-203ENST00000586134 MMP10P09238 476 aa11.71□□□□□ -0.53
ZNF540-203ENST00000586134 U2AF1L5P0DN76 240 aaPredicted RBP11.71□□□□□ -0.53
ZNF540-203ENST00000586134 TGFB2P61812 414 aa11.71□□□□□ -0.53
ZNF540-203ENST00000586134 U2AF1Q01081 240 aaKnown RBP eCLIP11.71□□□□□ -0.53
ZNF540-203ENST00000586134 SART3Q15020 963 aaKnown RBP11.71□□□□□ -0.53
ZNF540-203ENST00000586134 PPP2R5AQ15172 486 aa11.71□□□□□ -0.53
ZNF540-203ENST00000586134 ANKRD23Q86SG2 305 aa11.71□□□□□ -0.53
ZNF540-203ENST00000586134 TTC5Q8N0Z6 440 aa11.71□□□□□ -0.53
ZNF540-203ENST00000586134 PSD3Q9NYI0 1048 aa11.71□□□□□ -0.53
ZNF540-203ENST00000586134 LRRFIP2Q9Y608 721 aaKnown RBP11.71□□□□□ -0.53
ZNF540-203ENST00000586134 ZNF790Q6PG37 636 aa11.7□□□□□ -0.54
ZNF540-203ENST00000586134 PACS2Q86VP3 889 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms