RNA–Protein interactions for RNA: ENST00000585395.6

LSM7-202, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM7, Length 621 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-202ENST00000585395 SLC51AQ86UW1 340 aa29.18■■■□□ 2.26
LSM7-202ENST00000585395 NOB1Q9ULX3 412 aaKnown RBP29.18■■■□□ 2.26
LSM7-202ENST00000585395 PPIP5K2O43314 1243 aa29.17■■■□□ 2.26
LSM7-202ENST00000585395 UBE3BQ7Z3V4 1068 aa29.17■■■□□ 2.26
LSM7-202ENST00000585395 CELF1Q92879 486 aaKnown RBP29.17■■■□□ 2.26
LSM7-202ENST00000585395 BEGAINQ9BUH8 593 aa29.17■■■□□ 2.26
LSM7-202ENST00000585395 SRCIN1Q9C0H9 1055 aa29.17■■■□□ 2.26
LSM7-202ENST00000585395 MYH3P11055 1940 aa29.17■■■□□ 2.26
LSM7-202ENST00000585395 SNED1Q8TER0 1413 aa29.17■■■□□ 2.26
LSM7-202ENST00000585395 THSD7BQ9C0I4 1608 aa29.16■■■□□ 2.26
LSM7-202ENST00000585395 ALDH1L1O75891 902 aa29.16■■■□□ 2.26
LSM7-202ENST00000585395 RGS19P49795 217 aa29.16■■■□□ 2.26
LSM7-202ENST00000585395 EIF6P56537 245 aaKnown RBP29.16■■■□□ 2.26
LSM7-202ENST00000585395 NIM1KQ8IY84 436 aa29.16■■■□□ 2.26
LSM7-202ENST00000585395 ECE1P42892 770 aa29.15■■■□□ 2.26
LSM7-202ENST00000585395 BEND3Q5T5X7 828 aa29.15■■■□□ 2.26
LSM7-202ENST00000585395 PCDH10Q9P2E7 1040 aa29.15■■■□□ 2.26
LSM7-202ENST00000585395 CTSWP56202 376 aa29.14■■■□□ 2.26
LSM7-202ENST00000585395 RPS8P62241 208 aaKnown RBP29.14■■■□□ 2.26
LSM7-202ENST00000585395 GCKRQ14397 625 aa29.14■■■□□ 2.26
LSM7-202ENST00000585395 CCDC85CA6NKD9 419 aa29.13■■■□□ 2.25
LSM7-202ENST00000585395 AOC3Q16853 763 aa29.13■■■□□ 2.25
LSM7-202ENST00000585395 FRAT1Q92837 279 aaPredicted RBP29.13■■■□□ 2.25
LSM7-202ENST00000585395 SEC31BQ9NQW1 1179 aa29.13■■■□□ 2.25
LSM7-202ENST00000585395 BCAR3O75815 825 aa29.12■■■□□ 2.25
LSM7-202ENST00000585395 CAPNS2Q96L46 248 aa29.12■■■□□ 2.25
LSM7-202ENST00000585395 NSFL1CQ9UNZ2 370 aaKnown RBP29.12■■■□□ 2.25
LSM7-202ENST00000585395 CCT4P50991 539 aaKnown RBP29.11■■■□□ 2.25
LSM7-202ENST00000585395 ZKSCAN2Q63HK3 967 aa29.11■■■□□ 2.25
LSM7-202ENST00000585395 ANKRD18AQ8IVF6 992 aa29.11■■■□□ 2.25
LSM7-202ENST00000585395 CDC5LQ99459 802 aaKnown RBP29.11■■■□□ 2.25
LSM7-202ENST00000585395 RCAN3Q9UKA8 241 aa29.11■■■□□ 2.25
LSM7-202ENST00000585395 LRRC37AA6NMS7 1700 aa29.11■■■□□ 2.25
LSM7-202ENST00000585395 H7C1W4 665 aa29.1■■■□□ 2.25
LSM7-202ENST00000585395 LMOD1P29536 600 aaPredicted RBP29.1■■■□□ 2.25
LSM7-202ENST00000585395 GPR101Q96P66 508 aaPredicted RBP29.1■■■□□ 2.25
LSM7-202ENST00000585395 VPS33BQ9H267 617 aa29.1■■■□□ 2.25
LSM7-202ENST00000585395 C9orf78Q9NZ63 289 aaPredicted RBP29.1■■■□□ 2.25
LSM7-202ENST00000585395 GJA3Q9Y6H8 435 aa29.1■■■□□ 2.25
LSM7-202ENST00000585395 ATF7IPQ6VMQ6 1270 aa29.09■■■□□ 2.25
LSM7-202ENST00000585395 PAXIP1Q6ZW49 1069 aaPredicted RBP29.09■■■□□ 2.25
LSM7-202ENST00000585395 RTFDC1Q9BY42 306 aaPredicted RBP29.09■■■□□ 2.25
LSM7-202ENST00000585395 C6orf229H3BNL8 230 aa29.08■■■□□ 2.25
LSM7-202ENST00000585395 MS4A1P11836 297 aa29.07■■■□□ 2.24
LSM7-202ENST00000585395 ANKIB1Q9P2G1 1089 aa29.07■■■□□ 2.24
LSM7-202ENST00000585395 SPEF2Q9C093 1822 aa29.06■■■□□ 2.24
LSM7-202ENST00000585395 GRM8O00222 908 aa29.06■■■□□ 2.24
LSM7-202ENST00000585395 CYP4F22Q6NT55 531 aa29.06■■■□□ 2.24
LSM7-202ENST00000585395 TTLL11Q8NHH1 800 aa29.06■■■□□ 2.24
LSM7-202ENST00000585395 MAP2K2P36507 400 aa29.05■■■□□ 2.24
LSM7-202ENST00000585395 GPSM2P81274 684 aa29.05■■■□□ 2.24
LSM7-202ENST00000585395 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.05■■■□□ 2.24
LSM7-202ENST00000585395 EYA3Q99504 573 aa29.05■■■□□ 2.24
LSM7-202ENST00000585395 GREM2Q9H772 168 aa29.05■■■□□ 2.24
LSM7-202ENST00000585395 HDAC5Q9UQL6 1122 aa29.05■■■□□ 2.24
LSM7-202ENST00000585395 TRPM7Q96QT4 1865 aa29.05■■■□□ 2.24
LSM7-202ENST00000585395 COL4A1P02462 1669 aa29.05■■■□□ 2.24
LSM7-202ENST00000585395 COL4A5P29400 1685 aa29.05■■■□□ 2.24
LSM7-202ENST00000585395 LTBP1Q14766 1721 aa29.04■■■□□ 2.24
LSM7-202ENST00000585395 KIAA2012Q0VF49 1180 aa29.04■■■□□ 2.24
LSM7-202ENST00000585395 WASHC4Q2M389 1173 aa29.04■■■□□ 2.24
LSM7-202ENST00000585395 USP50Q70EL3 339 aaPredicted RBP29.04■■■□□ 2.24
LSM7-202ENST00000585395 CHMP3Q9Y3E7 222 aa29.04■■■□□ 2.24
LSM7-202ENST00000585395 TLL2Q9Y6L7 1015 aa29.04■■■□□ 2.24
LSM7-202ENST00000585395 IGHMBP2P38935 993 aaKnown RBP29.03■■■□□ 2.24
LSM7-202ENST00000585395 SCNN1DP51172 638 aa29.03■■■□□ 2.24
LSM7-202ENST00000585395 GRM1Q13255 1194 aa29.03■■■□□ 2.24
LSM7-202ENST00000585395 CST9Q5W186 159 aa29.03■■■□□ 2.24
LSM7-202ENST00000585395 FTSJ3Q8IY81 847 aaKnown RBP29.03■■■□□ 2.24
LSM7-202ENST00000585395 PLA2G12BQ9BX93 195 aa29.03■■■□□ 2.24
LSM7-202ENST00000585395 ZNRF3Q9ULT6 936 aa29.03■■■□□ 2.24
LSM7-202ENST00000585395 G3V3G9 751 aa29.02■■■□□ 2.24
LSM7-202ENST00000585395 RIMBP2O15034 1052 aa29.02■■■□□ 2.24
LSM7-202ENST00000585395 CA12O43570 354 aa29.02■■■□□ 2.24
LSM7-202ENST00000585395 TRIM27P14373 513 aa29.02■■■□□ 2.24
LSM7-202ENST00000585395 EPS15P42566 896 aa29.02■■■□□ 2.24
LSM7-202ENST00000585395 DCAF8Q5TAQ9 597 aa29.02■■■□□ 2.24
LSM7-202ENST00000585395 UFL1O94874 794 aa29.01■■■□□ 2.23
LSM7-202ENST00000585395 FMR1Q06787 632 aaKnown RBP eCLIP29.01■■■□□ 2.23
LSM7-202ENST00000585395 GGA1Q9UJY5 639 aa29.01■■■□□ 2.23
LSM7-202ENST00000585395 DUOX1Q9NRD9 1551 aa29.01■■■□□ 2.23
LSM7-202ENST00000585395 RTL9Q8NET4 1388 aa29■■■□□ 2.23
LSM7-202ENST00000585395 ITGA6P23229 1130 aa28.99■■■□□ 2.23
LSM7-202ENST00000585395 CASP7P55210 303 aa28.99■■■□□ 2.23
LSM7-202ENST00000585395 INTS3Q68E01 1043 aaKnown RBP28.99■■■□□ 2.23
LSM7-202ENST00000585395 XDHP47989 1333 aa28.98■■■□□ 2.23
LSM7-202ENST00000585395 TRAF5O00463 557 aa28.98■■■□□ 2.23
LSM7-202ENST00000585395 CIAPIN1Q6FI81 312 aa28.98■■■□□ 2.23
LSM7-202ENST00000585395 DZIP1LQ8IYY4 767 aaKnown RBP28.98■■■□□ 2.23
LSM7-202ENST00000585395 TBC1D16Q8TBP0 767 aa28.98■■■□□ 2.23
LSM7-202ENST00000585395 MPHOSPH8Q99549 860 aa28.98■■■□□ 2.23
LSM7-202ENST00000585395 ZC3H12CQ9C0D7 883 aaKnown RBP28.98■■■□□ 2.23
LSM7-202ENST00000585395 POLLQ9UGP5 575 aa28.98■■■□□ 2.23
LSM7-202ENST00000585395 UTYO14607 1347 aa28.97■■■□□ 2.23
LSM7-202ENST00000585395 ANKRD18BA2A2Z9 1011 aa28.97■■■□□ 2.23
LSM7-202ENST00000585395 TSKSQ9UJT2 592 aa28.97■■■□□ 2.23
LSM7-202ENST00000585395 RAD17O75943 681 aa28.96■■■□□ 2.23
LSM7-202ENST00000585395 TNIP1Q15025 636 aa28.96■■■□□ 2.23
LSM7-202ENST00000585395 CLUAP1Q96AJ1 413 aa28.96■■■□□ 2.23
LSM7-202ENST00000585395 MCOLN1Q9GZU1 580 aa28.96■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms