RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 ADARB2Q9NS39 739 aaKnown RBP15.7■□□□□ 0.1
SS18-225ENST00000585121 GPRC5DQ9NZD1 345 aa15.7■□□□□ 0.1
SS18-225ENST00000585121 RTL9Q8NET4 1388 aa15.7■□□□□ 0.1
SS18-225ENST00000585121 TAF1P21675 1872 aa15.7■□□□□ 0.1
SS18-225ENST00000585121 DOK7Q18PE1 504 aa15.69■□□□□ 0.1
SS18-225ENST00000585121 CNTROBQ8N137 903 aa15.69■□□□□ 0.1
SS18-225ENST00000585121 C9orf78Q9NZ63 289 aaPredicted RBP15.69■□□□□ 0.1
SS18-225ENST00000585121 YDJCA8MPS7 323 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 ECE2O60344 883 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 ALDH1L1O75891 902 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 ITGA6P23229 1130 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 MPHOSPH8Q99549 860 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 SRCIN1Q9C0H9 1055 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 CREBZFQ9NS37 354 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 LRRC37AA6NMS7 1700 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 H7C1D1 291 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 CSF1RP07333 972 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 CASP7P55210 303 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 MAP1SQ66K74 1059 aaPredicted RBP15.68■□□□□ 0.1
SS18-225ENST00000585121 GPR101Q96P66 508 aaPredicted RBP15.68■□□□□ 0.1
SS18-225ENST00000585121 MINPP1Q9UNW1 487 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 CHMP3Q9Y3E7 222 aa15.68■□□□□ 0.1
SS18-225ENST00000585121 DUOX1Q9NRD9 1551 aa15.67■□□□□ 0.1
SS18-225ENST00000585121 ANKRD18BA2A2Z9 1011 aa15.67■□□□□ 0.1
SS18-225ENST00000585121 GRM8O00222 908 aa15.67■□□□□ 0.1
SS18-225ENST00000585121 PSMD14O00487 310 aa15.67■□□□□ 0.1
SS18-225ENST00000585121 MRPL50Q8N5N7 158 aaKnown RBP15.67■□□□□ 0.1
SS18-225ENST00000585121 ANKRD2Q9GZV1 360 aa15.67■□□□□ 0.1
SS18-225ENST00000585121 CNOT7Q9UIV1 285 aaKnown RBP15.67■□□□□ 0.1
SS18-225ENST00000585121 PASKQ96RG2 1323 aa15.66■□□□□ 0.1
SS18-225ENST00000585121 ITGBL1O95965 494 aaPredicted RBP15.66■□□□□ 0.1
SS18-225ENST00000585121 RPS12P25398 132 aaKnown RBP15.66■□□□□ 0.1
SS18-225ENST00000585121 IFIT5Q13325 482 aaKnown RBP15.66■□□□□ 0.1
SS18-225ENST00000585121 FAM161AQ3B820 660 aa15.66■□□□□ 0.1
SS18-225ENST00000585121 DIEXFQ68CQ4 756 aaKnown RBP15.66■□□□□ 0.1
SS18-225ENST00000585121 DPF2Q92785 391 aa15.66■□□□□ 0.1
SS18-225ENST00000585121 CDCA7LQ96GN5 454 aa15.66■□□□□ 0.1
SS18-225ENST00000585121 PTPRCP08575 1304 aa15.66■□□□□ 0.1
SS18-225ENST00000585121 TMEM88BA6NKF7 163 aa15.65■□□□□ 0.1
SS18-225ENST00000585121 CT47B1P0C2W7 299 aaPredicted RBP15.65■□□□□ 0.1
SS18-225ENST00000585121 ALDH1L2Q3SY69 923 aa15.65■□□□□ 0.1
SS18-225ENST00000585121 LEMD3Q9Y2U8 911 aa15.65■□□□□ 0.1
SS18-225ENST00000585121 COL4A1P02462 1669 aa15.64■□□□□ 0.09
SS18-225ENST00000585121 CCT4P50991 539 aaKnown RBP15.64■□□□□ 0.09
SS18-225ENST00000585121 CCDC57Q2TAC2 916 aa15.64■□□□□ 0.09
SS18-225ENST00000585121 TAF7LQ5H9L4 462 aa15.64■□□□□ 0.09
SS18-225ENST00000585121 MICALL2Q8IY33 904 aa15.64■□□□□ 0.09
SS18-225ENST00000585121 SSH1Q8WYL5 1049 aa15.64■□□□□ 0.09
SS18-225ENST00000585121 ZBTB12Q9Y330 459 aaPredicted RBP15.64■□□□□ 0.09
SS18-225ENST00000585121 KCNJ4P48050 445 aa15.63■□□□□ 0.09
SS18-225ENST00000585121 FOXO4P98177 505 aa15.63■□□□□ 0.09
SS18-225ENST00000585121 LMBR1LQ6UX01 489 aa15.63■□□□□ 0.09
SS18-225ENST00000585121 PODNQ7Z5L7 613 aa15.63■□□□□ 0.09
SS18-225ENST00000585121 JMYQ8N9B5 988 aa15.63■□□□□ 0.09
SS18-225ENST00000585121 ZC3H15Q8WU90 426 aaKnown RBP15.63■□□□□ 0.09
SS18-225ENST00000585121 SMC4Q9NTJ3 1288 aa15.63■□□□□ 0.09
SS18-225ENST00000585121 VIL1P09327 827 aaKnown RBP15.63■□□□□ 0.09
SS18-225ENST00000585121 TRMT2AQ8IZ69 625 aaKnown RBP15.63■□□□□ 0.09
SS18-225ENST00000585121 KCNQ5Q9NR82 932 aa15.63■□□□□ 0.09
SS18-225ENST00000585121 MED23Q9ULK4 1368 aa15.62■□□□□ 0.09
SS18-225ENST00000585121 MKRN1Q9UHC7 482 aaKnown RBP15.62■□□□□ 0.09
SS18-225ENST00000585121 MYH3P11055 1940 aa15.61■□□□□ 0.09
SS18-225ENST00000585121 LTBP1Q14766 1721 aa15.61■□□□□ 0.09
SS18-225ENST00000585121 USP17L3A6NCW0 530 aa15.61■□□□□ 0.09
SS18-225ENST00000585121 USP17L4A6NCW7 530 aa15.61■□□□□ 0.09
SS18-225ENST00000585121 CHRNDQ07001 517 aa15.61■□□□□ 0.09
SS18-225ENST00000585121 USP17L1Q7RTZ2 530 aa15.61■□□□□ 0.09
SS18-225ENST00000585121 COA1Q9GZY4 146 aa15.61■□□□□ 0.09
SS18-225ENST00000585121 ZNF804BA4D1E1 1349 aa15.61■□□□□ 0.09
SS18-225ENST00000585121 RSBN1LQ6PCB5 846 aaPredicted RBP15.6■□□□□ 0.09
SS18-225ENST00000585121 AGBL3Q8NEM8 1001 aa15.6■□□□□ 0.09
SS18-225ENST00000585121 TRPM4Q8TD43 1214 aa15.6■□□□□ 0.09
SS18-225ENST00000585121 PGAP2Q9UHJ9 254 aa15.6■□□□□ 0.09
SS18-225ENST00000585121 ABT1Q9ULW3 272 aaKnown RBP15.6■□□□□ 0.09
SS18-225ENST00000585121 ADAMTSL1Q8N6G6 1762 aa15.6■□□□□ 0.09
SS18-225ENST00000585121 TBC1D10BQ4KMP7 808 aaPredicted RBP15.59■□□□□ 0.09
SS18-225ENST00000585121 EPHA10Q5JZY3 1008 aa15.59■□□□□ 0.09
SS18-225ENST00000585121 RBM26Q5T8P6 1007 aaKnown RBP15.59■□□□□ 0.09
SS18-225ENST00000585121 LDHAL6AQ6ZMR3 332 aa15.59■□□□□ 0.09
SS18-225ENST00000585121 SAMD7Q7Z3H4 446 aa15.59■□□□□ 0.09
SS18-225ENST00000585121 MIER1Q8N108 512 aa15.59■□□□□ 0.09
SS18-225ENST00000585121 CNNM1Q9NRU3 951 aa15.59■□□□□ 0.09
SS18-225ENST00000585121 SHTN1A0MZ66 631 aa15.58■□□□□ 0.09
SS18-225ENST00000585121 HIRAP54198 1017 aaPredicted RBP15.58■□□□□ 0.09
SS18-225ENST00000585121 CDC37L1Q7L3B6 337 aa15.58■□□□□ 0.09
SS18-225ENST00000585121 FBXW7Q969H0 707 aa15.58■□□□□ 0.09
SS18-225ENST00000585121 SUCLG2Q96I99 432 aa15.58■□□□□ 0.09
SS18-225ENST00000585121 CNTNAP1P78357 1384 aa15.58■□□□□ 0.09
SS18-225ENST00000585121 WTIPA6NIX2 430 aaPredicted RBP15.58■□□□□ 0.08
SS18-225ENST00000585121 NBPF7P0C2Y1 421 aaPredicted RBP15.58■□□□□ 0.08
SS18-225ENST00000585121 DEFB115Q30KQ5 88 aa15.58■□□□□ 0.08
SS18-225ENST00000585121 DCPSQ96C86 337 aaKnown RBP15.58■□□□□ 0.08
SS18-225ENST00000585121 UTYO14607 1347 aa15.58■□□□□ 0.08
SS18-225ENST00000585121 TRAF5O00463 557 aa15.57■□□□□ 0.08
SS18-225ENST00000585121 USP17L8P0C7I0 530 aa15.57■□□□□ 0.08
SS18-225ENST00000585121 KIF4BQ2VIQ3 1234 aa15.57■□□□□ 0.08
SS18-225ENST00000585121 HELBQ8NG08 1087 aaPredicted RBP15.57■□□□□ 0.08
SS18-225ENST00000585121 ZNF594Q96JF6 807 aaPredicted RBP15.57■□□□□ 0.08
SS18-225ENST00000585121 GLIS2Q9BZE0 524 aaPredicted RBP15.57■□□□□ 0.08
SS18-225ENST00000585121 API5Q9BZZ5 524 aaKnown RBP15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms