RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-222ENST00000584908 NIM1KQ8IY84 436 aa20.49■□□□□ 0.87
ERBB2-222ENST00000584908 RRAGCQ9HB90 399 aa20.49■□□□□ 0.87
ERBB2-222ENST00000584908 MINPP1Q9UNW1 487 aa20.49■□□□□ 0.87
ERBB2-222ENST00000584908 TRIM27P14373 513 aa20.48■□□□□ 0.87
ERBB2-222ENST00000584908 C1QTNF8P60827 252 aa20.48■□□□□ 0.87
ERBB2-222ENST00000584908 WASHC4Q2M389 1173 aa20.48■□□□□ 0.87
ERBB2-222ENST00000584908 ATF7IPQ6VMQ6 1270 aa20.48■□□□□ 0.87
ERBB2-222ENST00000584908 GPC2Q8N158 579 aa20.48■□□□□ 0.87
ERBB2-222ENST00000584908 EYA3Q99504 573 aa20.48■□□□□ 0.87
ERBB2-222ENST00000584908 ANKIB1Q9P2G1 1089 aa20.48■□□□□ 0.87
ERBB2-222ENST00000584908 GGA1Q9UJY5 639 aa20.47■□□□□ 0.87
ERBB2-222ENST00000584908 ZNRF3Q9ULT6 936 aa20.47■□□□□ 0.87
ERBB2-222ENST00000584908 C6orf229H3BNL8 230 aa20.46■□□□□ 0.87
ERBB2-222ENST00000584908 TOMM70O94826 608 aa20.46■□□□□ 0.87
ERBB2-222ENST00000584908 EIF6P56537 245 aaKnown RBP20.46■□□□□ 0.87
ERBB2-222ENST00000584908 ANKRD44Q8N8A2 993 aa20.46■□□□□ 0.87
ERBB2-222ENST00000584908 MPHOSPH8Q99549 860 aa20.46■□□□□ 0.87
ERBB2-222ENST00000584908 BICC1Q9H694 974 aaKnown RBP20.46■□□□□ 0.87
ERBB2-222ENST00000584908 UFL1O94874 794 aa20.45■□□□□ 0.86
ERBB2-222ENST00000584908 ATP2B4P23634 1241 aa20.45■□□□□ 0.86
ERBB2-222ENST00000584908 CCDC57Q2TAC2 916 aa20.45■□□□□ 0.86
ERBB2-222ENST00000584908 PSME4Q14997 1843 aa20.44■□□□□ 0.86
ERBB2-222ENST00000584908 ZKSCAN2Q63HK3 967 aa20.44■□□□□ 0.86
ERBB2-222ENST00000584908 FRAT1Q92837 279 aaPredicted RBP20.44■□□□□ 0.86
ERBB2-222ENST00000584908 ANKRD2Q9GZV1 360 aa20.44■□□□□ 0.86
ERBB2-222ENST00000584908 CHMP3Q9Y3E7 222 aa20.44■□□□□ 0.86
ERBB2-222ENST00000584908 SCN9AQ15858 1988 aa20.43■□□□□ 0.86
ERBB2-222ENST00000584908 IQCA1LA6NCM1 817 aa20.43■□□□□ 0.86
ERBB2-222ENST00000584908 YDJCA8MPS7 323 aa20.43■□□□□ 0.86
ERBB2-222ENST00000584908 CXCL9Q07325 125 aa20.43■□□□□ 0.86
ERBB2-222ENST00000584908 RBM46Q8TBY0 533 aaKnown RBP20.43■□□□□ 0.86
ERBB2-222ENST00000584908 ZC3H12CQ9C0D7 883 aaKnown RBP20.43■□□□□ 0.86
ERBB2-222ENST00000584908 LEMD3Q9Y2U8 911 aa20.43■□□□□ 0.86
ERBB2-222ENST00000584908 MED23Q9ULK4 1368 aa20.42■□□□□ 0.86
ERBB2-222ENST00000584908 RIMBP2O15034 1052 aa20.41■□□□□ 0.86
ERBB2-222ENST00000584908 UBTFL1P0CB47 393 aaPredicted RBP20.41■□□□□ 0.86
ERBB2-222ENST00000584908 CHRNDQ07001 517 aa20.41■□□□□ 0.86
ERBB2-222ENST00000584908 GPR101Q96P66 508 aaPredicted RBP20.41■□□□□ 0.86
ERBB2-222ENST00000584908 HDAC5Q9UQL6 1122 aa20.41■□□□□ 0.86
ERBB2-222ENST00000584908 TNNQ9UQP3 1299 aa20.41■□□□□ 0.86
ERBB2-222ENST00000584908 ADAMTSL1Q8N6G6 1762 aa20.4■□□□□ 0.86
ERBB2-222ENST00000584908 WTIPA6NIX2 430 aaPredicted RBP20.4■□□□□ 0.86
ERBB2-222ENST00000584908 CIAPIN1Q6FI81 312 aa20.4■□□□□ 0.86
ERBB2-222ENST00000584908 LDHAL6AQ6ZMR3 332 aa20.4■□□□□ 0.86
ERBB2-222ENST00000584908 C16orf71Q8IYS4 520 aaPredicted RBP20.4■□□□□ 0.86
ERBB2-222ENST00000584908 ZNF594Q96JF6 807 aaPredicted RBP20.4■□□□□ 0.86
ERBB2-222ENST00000584908 ECE2O60344 883 aa20.39■□□□□ 0.85
ERBB2-222ENST00000584908 SCNN1DP51172 638 aa20.39■□□□□ 0.85
ERBB2-222ENST00000584908 TNIP1Q15025 636 aa20.39■□□□□ 0.85
ERBB2-222ENST00000584908 TAF7LQ5H9L4 462 aa20.39■□□□□ 0.85
ERBB2-222ENST00000584908 MEIS3Q99687 375 aa20.39■□□□□ 0.85
ERBB2-222ENST00000584908 TAF1DQ9H5J8 278 aaPredicted RBP20.39■□□□□ 0.85
ERBB2-222ENST00000584908 DBNDD1Q9H9R9 158 aa20.39■□□□□ 0.85
ERBB2-222ENST00000584908 HACL1Q9UJ83 578 aa20.39■□□□□ 0.85
ERBB2-222ENST00000584908 GJA3Q9Y6H8 435 aa20.39■□□□□ 0.85
ERBB2-222ENST00000584908 ZNF646O15015 1829 aaPredicted RBP20.38■□□□□ 0.85
ERBB2-222ENST00000584908 GNAI3P08754 354 aa20.38■□□□□ 0.85
ERBB2-222ENST00000584908 CLUAP1Q96AJ1 413 aa20.38■□□□□ 0.85
ERBB2-222ENST00000584908 ZNF804BA4D1E1 1349 aa20.38■□□□□ 0.85
ERBB2-222ENST00000584908 RAD17O75943 681 aa20.37■□□□□ 0.85
ERBB2-222ENST00000584908 RFX5P48382 616 aaPredicted RBP20.37■□□□□ 0.85
ERBB2-222ENST00000584908 FSTL1Q12841 308 aa20.37■□□□□ 0.85
ERBB2-222ENST00000584908 C15orf52Q6ZUT6 534 aaKnown RBP20.37■□□□□ 0.85
ERBB2-222ENST00000584908 RIPOR2Q9Y4F9 1068 aa20.37■□□□□ 0.85
ERBB2-222ENST00000584908 IRS2Q9Y4H2 1338 aa20.37■□□□□ 0.85
ERBB2-222ENST00000584908 ZNF609O15014 1411 aa20.37■□□□□ 0.85
ERBB2-222ENST00000584908 DOK7Q18PE1 504 aa20.36■□□□□ 0.85
ERBB2-222ENST00000584908 PODNQ7Z5L7 613 aa20.36■□□□□ 0.85
ERBB2-222ENST00000584908 TMEM57Q8N5G2 664 aa20.36■□□□□ 0.85
ERBB2-222ENST00000584908 CNNM1Q9NRU3 951 aa20.36■□□□□ 0.85
ERBB2-222ENST00000584908 LRRFIP2Q9Y608 721 aaKnown RBP20.36■□□□□ 0.85
ERBB2-222ENST00000584908 EPHX2P34913 555 aa20.35■□□□□ 0.85
ERBB2-222ENST00000584908 TXNRD3Q86VQ6 643 aa20.35■□□□□ 0.85
ERBB2-222ENST00000584908 DZIP1LQ8IYY4 767 aaKnown RBP20.35■□□□□ 0.85
ERBB2-222ENST00000584908 SMC1BQ8NDV3 1235 aa20.35■□□□□ 0.85
ERBB2-222ENST00000584908 PUS3Q9BZE2 481 aaKnown RBP20.35■□□□□ 0.85
ERBB2-222ENST00000584908 GPRC5DQ9NZD1 345 aa20.35■□□□□ 0.85
ERBB2-222ENST00000584908 MROH5Q6ZUA9 1318 aa20.34■□□□□ 0.85
ERBB2-222ENST00000584908 PSMD14O00487 310 aa20.34■□□□□ 0.85
ERBB2-222ENST00000584908 TAF5LO75529 589 aa20.34■□□□□ 0.85
ERBB2-222ENST00000584908 LMOD1P29536 600 aaPredicted RBP20.34■□□□□ 0.85
ERBB2-222ENST00000584908 MTX1Q13505 466 aa20.34■□□□□ 0.85
ERBB2-222ENST00000584908 PNMA8AQ86V59 439 aaPredicted RBP20.34■□□□□ 0.85
ERBB2-222ENST00000584908 COA1Q9GZY4 146 aa20.34■□□□□ 0.85
ERBB2-222ENST00000584908 KCNQ5Q9NR82 932 aa20.34■□□□□ 0.85
ERBB2-222ENST00000584908 VIL1P09327 827 aaKnown RBP20.33■□□□□ 0.85
ERBB2-222ENST00000584908 RLBP1P12271 317 aa20.33■□□□□ 0.85
ERBB2-222ENST00000584908 RPS12P25398 132 aaKnown RBP20.33■□□□□ 0.85
ERBB2-222ENST00000584908 GMPSP49915 693 aaPredicted RBP20.33■□□□□ 0.85
ERBB2-222ENST00000584908 PTPN12Q05209 780 aaKnown RBP20.33■□□□□ 0.85
ERBB2-222ENST00000584908 HELBQ8NG08 1087 aaPredicted RBP20.33■□□□□ 0.85
ERBB2-222ENST00000584908 DPF2Q92785 391 aa20.33■□□□□ 0.85
ERBB2-222ENST00000584908 FBXO3Q9UK99 471 aa20.33■□□□□ 0.85
ERBB2-222ENST00000584908 RCAN3Q9UKA8 241 aa20.33■□□□□ 0.85
ERBB2-222ENST00000584908 G3V3G9 751 aa20.32■□□□□ 0.84
ERBB2-222ENST00000584908 KLRK1P26718 216 aa20.32■□□□□ 0.84
ERBB2-222ENST00000584908 EPS15P42566 896 aa20.32■□□□□ 0.84
ERBB2-222ENST00000584908 KCNJ4P48050 445 aa20.32■□□□□ 0.84
ERBB2-222ENST00000584908 UBE4AQ14139 1066 aa20.32■□□□□ 0.84
ERBB2-222ENST00000584908 DCAF8Q5TAQ9 597 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 137 ms