RNA–Protein interactions for RNA: ENST00000584887.1

TOP3A-219, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-219ENST00000584887 GRM1Q13255 1194 aa26.22■■□□□ 1.79
TOP3A-219ENST00000584887 DCAF8Q5TAQ9 597 aa26.22■■□□□ 1.79
TOP3A-219ENST00000584887 GLIS2Q9BZE0 524 aaPredicted RBP26.22■■□□□ 1.79
TOP3A-219ENST00000584887 PCNTO95613 3336 aa26.22■■□□□ 1.79
TOP3A-219ENST00000584887 IL16Q14005 1332 aa26.21■■□□□ 1.79
TOP3A-219ENST00000584887 SLC4A2P04920 1241 aa26.21■■□□□ 1.79
TOP3A-219ENST00000584887 IGKV5-2P06315 115 aa26.21■■□□□ 1.79
TOP3A-219ENST00000584887 G2E3Q7L622 706 aa26.21■■□□□ 1.79
TOP3A-219ENST00000584887 ZC3H12CQ9C0D7 883 aaKnown RBP26.21■■□□□ 1.79
TOP3A-219ENST00000584887 GGA1Q9UJY5 639 aa26.21■■□□□ 1.79
TOP3A-219ENST00000584887 WDR33Q9C0J8 1336 aaKnown RBP26.2■■□□□ 1.79
TOP3A-219ENST00000584887 TRPM7Q96QT4 1865 aa26.2■■□□□ 1.78
TOP3A-219ENST00000584887 CWF19L2Q2TBE0 894 aaKnown RBP26.2■■□□□ 1.78
TOP3A-219ENST00000584887 ANKRD18AQ8IVF6 992 aa26.2■■□□□ 1.78
TOP3A-219ENST00000584887 FANCIQ9NVI1 1328 aa26.19■■□□□ 1.78
TOP3A-219ENST00000584887 HIRAP54198 1017 aaPredicted RBP26.19■■□□□ 1.78
TOP3A-219ENST00000584887 CTSWP56202 376 aa26.19■■□□□ 1.78
TOP3A-219ENST00000584887 CST9Q5W186 159 aa26.19■■□□□ 1.78
TOP3A-219ENST00000584887 ZNF408Q9H9D4 720 aa26.19■■□□□ 1.78
TOP3A-219ENST00000584887 KCNQ5Q9NR82 932 aa26.19■■□□□ 1.78
TOP3A-219ENST00000584887 CELF2O95319 508 aaKnown RBP26.18■■□□□ 1.78
TOP3A-219ENST00000584887 PODXL2Q9NZ53 605 aa26.18■■□□□ 1.78
TOP3A-219ENST00000584887 SAMD7Q7Z3H4 446 aa26.17■■□□□ 1.78
TOP3A-219ENST00000584887 CAPNS2Q96L46 248 aa26.17■■□□□ 1.78
TOP3A-219ENST00000584887 RTL9Q8NET4 1388 aa26.17■■□□□ 1.78
TOP3A-219ENST00000584887 NEURL1BA8MQ27 555 aa26.16■■□□□ 1.78
TOP3A-219ENST00000584887 CTCFP49711 727 aaPredicted RBP26.16■■□□□ 1.78
TOP3A-219ENST00000584887 TBC1D10BQ4KMP7 808 aaPredicted RBP26.16■■□□□ 1.78
TOP3A-219ENST00000584887 RBM26Q5T8P6 1007 aaKnown RBP26.16■■□□□ 1.78
TOP3A-219ENST00000584887 CYP4F22Q6NT55 531 aa26.16■■□□□ 1.78
TOP3A-219ENST00000584887 UBE3BQ7Z3V4 1068 aa26.16■■□□□ 1.78
TOP3A-219ENST00000584887 ZC3H15Q8WU90 426 aaKnown RBP26.16■■□□□ 1.78
TOP3A-219ENST00000584887 DPF2Q92785 391 aa26.16■■□□□ 1.78
TOP3A-219ENST00000584887 CDC5LQ99459 802 aaKnown RBP26.16■■□□□ 1.78
TOP3A-219ENST00000584887 ECE1P42892 770 aa26.15■■□□□ 1.78
TOP3A-219ENST00000584887 FLIIQ13045 1269 aa26.15■■□□□ 1.78
TOP3A-219ENST00000584887 FKBP5Q13451 457 aaPredicted RBP26.15■■□□□ 1.78
TOP3A-219ENST00000584887 WBP1LQ9NX94 342 aa26.15■■□□□ 1.78
TOP3A-219ENST00000584887 PGAP2Q9UHJ9 254 aa26.15■■□□□ 1.78
TOP3A-219ENST00000584887 TLL2Q9Y6L7 1015 aa26.15■■□□□ 1.78
TOP3A-219ENST00000584887 XDHP47989 1333 aa26.14■■□□□ 1.78
TOP3A-219ENST00000584887 RPS12P25398 132 aaKnown RBP26.14■■□□□ 1.78
TOP3A-219ENST00000584887 CDC37L1Q7L3B6 337 aa26.14■■□□□ 1.78
TOP3A-219ENST00000584887 GREM2Q9H772 168 aa26.14■■□□□ 1.78
TOP3A-219ENST00000584887 NCBP3Q53F19 620 aaKnown RBP26.13■■□□□ 1.77
TOP3A-219ENST00000584887 USP48Q86UV5 1035 aa26.13■■□□□ 1.77
TOP3A-219ENST00000584887 TTLL11Q8NHH1 800 aa26.13■■□□□ 1.77
TOP3A-219ENST00000584887 MAP2K1Q02750 393 aaPredicted RBP26.12■■□□□ 1.77
TOP3A-219ENST00000584887 EXOSC9Q06265 439 aaKnown RBP26.12■■□□□ 1.77
TOP3A-219ENST00000584887 WDR63Q8IWG1 891 aa26.12■■□□□ 1.77
TOP3A-219ENST00000584887 SCN9AQ15858 1988 aa26.12■■□□□ 1.77
TOP3A-219ENST00000584887 EGFRP00533 1210 aa26.11■■□□□ 1.77
TOP3A-219ENST00000584887 ATP2B4P23634 1241 aa26.11■■□□□ 1.77
TOP3A-219ENST00000584887 FAM9BQ8IZU0 186 aa26.11■■□□□ 1.77
TOP3A-219ENST00000584887 MYH3P11055 1940 aa26.11■■□□□ 1.77
TOP3A-219ENST00000584887 SPEF2Q9C093 1822 aa26.1■■□□□ 1.77
TOP3A-219ENST00000584887 LBX1P52954 281 aa26.1■■□□□ 1.77
TOP3A-219ENST00000584887 GCKRQ14397 625 aa26.1■■□□□ 1.77
TOP3A-219ENST00000584887 DNAAF4Q8WXU2 420 aa26.1■■□□□ 1.77
TOP3A-219ENST00000584887 H7C1W4 665 aa26.09■■□□□ 1.77
TOP3A-219ENST00000584887 VIL1P09327 827 aaKnown RBP26.09■■□□□ 1.77
TOP3A-219ENST00000584887 KIF4BQ2VIQ3 1234 aa26.09■■□□□ 1.77
TOP3A-219ENST00000584887 DLK2Q6UY11 383 aa26.09■■□□□ 1.77
TOP3A-219ENST00000584887 KRT26Q7Z3Y9 468 aa26.09■■□□□ 1.77
TOP3A-219ENST00000584887 MYH16Q9H6N6 1097 aa26.09■■□□□ 1.77
TOP3A-219ENST00000584887 PRDM10Q9NQV6 1147 aa26.09■■□□□ 1.77
TOP3A-219ENST00000584887 VAMP4O75379 141 aa26.08■■□□□ 1.77
TOP3A-219ENST00000584887 SAPCD2Q86UD0 394 aa26.08■■□□□ 1.77
TOP3A-219ENST00000584887 DCPSQ96C86 337 aaKnown RBP26.08■■□□□ 1.77
TOP3A-219ENST00000584887 BEGAINQ9BUH8 593 aa26.08■■□□□ 1.77
TOP3A-219ENST00000584887 BSDC1Q9NW68 430 aaPredicted RBP26.08■■□□□ 1.77
TOP3A-219ENST00000584887 AOC2O75106 756 aa26.07■■□□□ 1.76
TOP3A-219ENST00000584887 IGHMBP2P38935 993 aaKnown RBP26.07■■□□□ 1.76
TOP3A-219ENST00000584887 MINPP1Q9UNW1 487 aa26.07■■□□□ 1.76
TOP3A-219ENST00000584887 WTIPA6NIX2 430 aaPredicted RBP26.06■■□□□ 1.76
TOP3A-219ENST00000584887 HSPA8P11142 646 aaKnown RBP26.06■■□□□ 1.76
TOP3A-219ENST00000584887 FAM161AQ3B820 660 aa26.06■■□□□ 1.76
TOP3A-219ENST00000584887 RSBN1LQ6PCB5 846 aaPredicted RBP26.06■■□□□ 1.76
TOP3A-219ENST00000584887 ADM5C9JUS6 153 aa26.05■■□□□ 1.76
TOP3A-219ENST00000584887 LINS1Q8NG48 757 aa26.05■■□□□ 1.76
TOP3A-219ENST00000584887 SPINK5Q9NQ38 1064 aaPredicted RBP26.05■■□□□ 1.76
TOP3A-219ENST00000584887 GGA3Q9NZ52 723 aa26.05■■□□□ 1.76
TOP3A-219ENST00000584887 THSD7BQ9C0I4 1608 aa26.04■■□□□ 1.76
TOP3A-219ENST00000584887 ITGA6P23229 1130 aa26.04■■□□□ 1.76
TOP3A-219ENST00000584887 FBXW7Q969H0 707 aa26.04■■□□□ 1.76
TOP3A-219ENST00000584887 CACNA1FO60840 1977 aa26.04■■□□□ 1.76
TOP3A-219ENST00000584887 USP17L3A6NCW0 530 aa26.03■■□□□ 1.76
TOP3A-219ENST00000584887 USP17L4A6NCW7 530 aa26.03■■□□□ 1.76
TOP3A-219ENST00000584887 F6X3S4 739 aa26.03■■□□□ 1.76
TOP3A-219ENST00000584887 CCT4P50991 539 aaKnown RBP26.03■■□□□ 1.76
TOP3A-219ENST00000584887 USP17L1Q7RTZ2 530 aa26.03■■□□□ 1.76
TOP3A-219ENST00000584887 AGBL3Q8NEM8 1001 aa26.03■■□□□ 1.76
TOP3A-219ENST00000584887 PLA2G12BQ9BX93 195 aa26.03■■□□□ 1.76
TOP3A-219ENST00000584887 POLR2AP24928 1970 aaKnown RBP26.03■■□□□ 1.76
TOP3A-219ENST00000584887 MED23Q9ULK4 1368 aa26.03■■□□□ 1.76
TOP3A-219ENST00000584887 CASP7P55210 303 aa26.02■■□□□ 1.76
TOP3A-219ENST00000584887 HUNKP57058 714 aa26.02■■□□□ 1.76
TOP3A-219ENST00000584887 PODNQ7Z5L7 613 aa26.02■■□□□ 1.76
TOP3A-219ENST00000584887 SULF1Q8IWU6 871 aa26.02■■□□□ 1.76
TOP3A-219ENST00000584887 MPHOSPH8Q99549 860 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms