RNA–Protein interactions for RNA: ENST00000584796.5

VAPA-208, Transcript of VAMP associated protein A, human

TSL 3

Gene VAPA, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAPA-208	ENST00000584796	OR13H1	Q8NG92	308 aa		6.28	□□□□□ -1.4
VAPA-208	ENST00000584796	CLP1	Q92989	425 aa	Known RBP	6.28	□□□□□ -1.4
VAPA-208	ENST00000584796	MEGF10	Q96KG7	1140 aa		6.28	□□□□□ -1.4
VAPA-208	ENST00000584796	MKNK1	Q9BUB5	465 aa		6.28	□□□□□ -1.4
VAPA-208	ENST00000584796	ZFP64	Q9NPA5	681 aa		6.28	□□□□□ -1.4
VAPA-208	ENST00000584796	GDF6	Q6KF10	455 aa	Predicted RBP	6.27	□□□□□ -1.41
VAPA-208	ENST00000584796	MAP4K3	Q8IVH8	894 aa		6.27	□□□□□ -1.41
VAPA-208	ENST00000584796	DZIP1L	Q8IYY4	767 aa	Known RBP	6.27	□□□□□ -1.41
VAPA-208	ENST00000584796	CACTIN-AS1	Q8N1I8	211 aa		6.27	□□□□□ -1.41
VAPA-208	ENST00000584796	TMEM130	Q8N3G9	435 aa		6.27	□□□□□ -1.41
VAPA-208	ENST00000584796	IL22RA1	Q8N6P7	574 aa		6.27	□□□□□ -1.41
VAPA-208	ENST00000584796	PIK3R5	Q8WYR1	880 aa		6.27	□□□□□ -1.41
VAPA-208	ENST00000584796	RBSN	Q9H1K0	784 aa		6.27	□□□□□ -1.41
VAPA-208	ENST00000584796	FAM13B	Q9NYF5	915 aa		6.27	□□□□□ -1.41
VAPA-208	ENST00000584796	UBAP1L	F5GYI3	381 aa		6.26	□□□□□ -1.41
VAPA-208	ENST00000584796	ZAP70	P43403	619 aa		6.26	□□□□□ -1.41
VAPA-208	ENST00000584796	LRP8	Q14114	963 aa		6.26	□□□□□ -1.41
VAPA-208	ENST00000584796	NAA30	Q147X3	362 aa	Predicted RBP	6.26	□□□□□ -1.41
VAPA-208	ENST00000584796	SETDB1	Q15047	1291 aa		6.26	□□□□□ -1.41
VAPA-208	ENST00000584796	MRPL18	Q9H0U6	180 aa	Known RBP	6.26	□□□□□ -1.41
VAPA-208	ENST00000584796	AKTIP	Q9H8T0	292 aa		6.26	□□□□□ -1.41
VAPA-208	ENST00000584796	SLAIN2	Q9P270	581 aa		6.26	□□□□□ -1.41
VAPA-208	ENST00000584796	TRIM33	Q9UPN9	1127 aa		6.26	□□□□□ -1.41
VAPA-208	ENST00000584796		F8W735	103 aa	Predicted RBP	6.25	□□□□□ -1.41
VAPA-208	ENST00000584796	COL13A1	Q5TAT6	717 aa	Predicted RBP	6.25	□□□□□ -1.41
VAPA-208	ENST00000584796		Q6ZS46	218 aa		6.25	□□□□□ -1.41
VAPA-208	ENST00000584796	DCAF11	Q8TEB1	546 aa		6.25	□□□□□ -1.41
VAPA-208	ENST00000584796	STIM2	Q9P246	746 aa		6.25	□□□□□ -1.41
VAPA-208	ENST00000584796	ZBTB39	O15060	712 aa		6.24	□□□□□ -1.41
VAPA-208	ENST00000584796	KIF4A	O95239	1232 aa		6.24	□□□□□ -1.41
VAPA-208	ENST00000584796	HYAL2	Q12891	473 aa		6.24	□□□□□ -1.41
VAPA-208	ENST00000584796	PRR23C	Q6ZRP0	262 aa		6.24	□□□□□ -1.41
VAPA-208	ENST00000584796	PBXIP1	Q96AQ6	731 aa		6.24	□□□□□ -1.41
VAPA-208	ENST00000584796	PSMG3-AS1	Q96PY0	264 aa		6.24	□□□□□ -1.41
VAPA-208	ENST00000584796	MUC3B	Q9H195	1237 aa		6.24	□□□□□ -1.41
VAPA-208	ENST00000584796	FNDC3A	Q9Y2H6	1198 aa	Known RBP	6.24	□□□□□ -1.41
VAPA-208	ENST00000584796	ALX3	O95076	343 aa		6.23	□□□□□ -1.41
VAPA-208	ENST00000584796	ATP11A	P98196	1134 aa		6.23	□□□□□ -1.41
VAPA-208	ENST00000584796	ABTB2	Q8N961	1025 aa		6.23	□□□□□ -1.41
VAPA-208	ENST00000584796	GPR152	Q8TDT2	470 aa		6.23	□□□□□ -1.41
VAPA-208	ENST00000584796	PPME1	Q9Y570	386 aa		6.23	□□□□□ -1.41
VAPA-208	ENST00000584796	TM4SF5	O14894	197 aa		6.22	□□□□□ -1.41
VAPA-208	ENST00000584796	HYAL3	O43820	417 aa	Predicted RBP	6.22	□□□□□ -1.41
VAPA-208	ENST00000584796	ZMYND15	Q9H091	742 aa		6.22	□□□□□ -1.41
VAPA-208	ENST00000584796	ABI2	Q9NYB9	513 aa	Predicted RBP	6.22	□□□□□ -1.41
VAPA-208	ENST00000584796	RNF112	Q9ULX5	631 aa		6.22	□□□□□ -1.41
VAPA-208	ENST00000584796	SMNDC1	O75940	238 aa	Known RBP eCLIP	6.21	□□□□□ -1.42	1e-7	■■■□□ 18.1
VAPA-208	ENST00000584796	ATP2B4	P23634	1241 aa		6.21	□□□□□ -1.42
VAPA-208	ENST00000584796	TTC39B	Q5VTQ0	682 aa	Predicted RBP	6.21	□□□□□ -1.42
VAPA-208	ENST00000584796	PDE12	Q6L8Q7	609 aa	Known RBP	6.21	□□□□□ -1.42
VAPA-208	ENST00000584796	ADAMTSL4	Q6UY14	1074 aa		6.21	□□□□□ -1.42
VAPA-208	ENST00000584796	ZC3HAV1	Q7Z2W4	902 aa	Known RBP	6.21	□□□□□ -1.42
VAPA-208	ENST00000584796	SLC51A	Q86UW1	340 aa		6.21	□□□□□ -1.42
VAPA-208	ENST00000584796	GALNT11	Q8NCW6	608 aa		6.21	□□□□□ -1.42
VAPA-208	ENST00000584796	SPACA7	Q96KW9	195 aa		6.21	□□□□□ -1.42
VAPA-208	ENST00000584796	SEPT3	Q9UH03	358 aa		6.21	□□□□□ -1.42
VAPA-208	ENST00000584796	SCNN1A	P37088	669 aa		6.2	□□□□□ -1.42
VAPA-208	ENST00000584796	CEP135	Q66GS9	1140 aa		6.2	□□□□□ -1.42
VAPA-208	ENST00000584796	NBPF11	Q86T75	865 aa		6.2	□□□□□ -1.42
VAPA-208	ENST00000584796	AGGF1	Q8N302	714 aa	eCLIP	6.2	□□□□□ -1.42
VAPA-208	ENST00000584796	CEP120	Q8N960	986 aa		6.2	□□□□□ -1.42
VAPA-208	ENST00000584796	PBX4	Q9BYU1	374 aa		6.2	□□□□□ -1.42
VAPA-208	ENST00000584796	RASSF4	Q9H2L5	321 aa		6.2	□□□□□ -1.42
VAPA-208	ENST00000584796	SERPINA10	Q9UK55	444 aa		6.2	□□□□□ -1.42
VAPA-208	ENST00000584796	LINC01387	J3KSC0	135 aa		6.19	□□□□□ -1.42
VAPA-208	ENST00000584796	CYP2E1	P05181	493 aa	Predicted RBP	6.19	□□□□□ -1.42
VAPA-208	ENST00000584796	FST	P19883	344 aa		6.19	□□□□□ -1.42
VAPA-208	ENST00000584796	CDC27	P30260	824 aa		6.19	□□□□□ -1.42
VAPA-208	ENST00000584796	NUDT16	Q96DE0	195 aa	Known RBP	6.19	□□□□□ -1.42
VAPA-208	ENST00000584796	CCDC97	Q96F63	343 aa	Predicted RBP	6.19	□□□□□ -1.42
VAPA-208	ENST00000584796	KRTAP9-2	Q9BYQ4	174 aa		6.19	□□□□□ -1.42
VAPA-208	ENST00000584796	LACRT	Q9GZZ8	138 aa		6.19	□□□□□ -1.42
VAPA-208	ENST00000584796	ELP3	Q9H9T3	547 aa		6.19	□□□□□ -1.42
VAPA-208	ENST00000584796	TMEM63C	Q9P1W3	806 aa		6.19	□□□□□ -1.42
VAPA-208	ENST00000584796	KRTAP9-1	A8MXZ3	250 aa	Predicted RBP	6.18	□□□□□ -1.42
VAPA-208	ENST00000584796	WISP1	O95388	367 aa		6.18	□□□□□ -1.42
VAPA-208	ENST00000584796	HELQ	Q8TDG4	1101 aa		6.18	□□□□□ -1.42
VAPA-208	ENST00000584796	KCNK4	Q9NYG8	393 aa		6.18	□□□□□ -1.42
VAPA-208	ENST00000584796	RPLP1	P05386	114 aa	Known RBP	6.17	□□□□□ -1.42
VAPA-208	ENST00000584796	GLB1	P16278	677 aa		6.17	□□□□□ -1.42
VAPA-208	ENST00000584796	CD68	P34810	354 aa	Predicted RBP	6.17	□□□□□ -1.42
VAPA-208	ENST00000584796	TXNDC11	Q6PKC3	985 aa		6.17	□□□□□ -1.42
VAPA-208	ENST00000584796	XKR5	Q6UX68	686 aa		6.17	□□□□□ -1.42
VAPA-208	ENST00000584796	ATCAY	Q86WG3	371 aa		6.17	□□□□□ -1.42
VAPA-208	ENST00000584796	NCAPG2	Q86XI2	1143 aa		6.17	□□□□□ -1.42
VAPA-208	ENST00000584796	KLHL23	Q8NBE8	558 aa		6.17	□□□□□ -1.42
VAPA-208	ENST00000584796	UBL7	Q96S82	380 aa	Predicted RBP	6.17	□□□□□ -1.42
VAPA-208	ENST00000584796	ADAM19	Q9H013	955 aa		6.17	□□□□□ -1.42
VAPA-208	ENST00000584796	FSCN2	O14926	492 aa		6.16	□□□□□ -1.42
VAPA-208	ENST00000584796	PTPRA	P18433	802 aa		6.16	□□□□□ -1.42
VAPA-208	ENST00000584796	EPHA1	P21709	976 aa		6.16	□□□□□ -1.42
VAPA-208	ENST00000584796	ZNF438	Q7Z4V0	828 aa		6.16	□□□□□ -1.42
VAPA-208	ENST00000584796	POP1	Q99575	1024 aa	Known RBP	6.16	□□□□□ -1.42
VAPA-208	ENST00000584796	CARD10	Q9BWT7	1032 aa		6.16	□□□□□ -1.42
VAPA-208	ENST00000584796	CNTN3	Q9P232	1028 aa		6.16	□□□□□ -1.42
VAPA-208	ENST00000584796	SALL4	Q9UJQ4	1053 aa		6.16	□□□□□ -1.42
VAPA-208	ENST00000584796	NFKBIE	O00221	500 aa		6.15	□□□□□ -1.42
VAPA-208	ENST00000584796	UVSSA	Q2YD98	709 aa		6.15	□□□□□ -1.42
VAPA-208	ENST00000584796	KIAA1211	Q6ZU35	1233 aa		6.15	□□□□□ -1.42
VAPA-208	ENST00000584796	ACAD11	Q709F0	780 aa		6.15	□□□□□ -1.42

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