RNA–Protein interactions for RNA: ENST00000584310.1

SCN4A-203, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

TSL 4

Gene SCN4A, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-203ENST00000584310 ITGA6P23229 1130 aa18.77■□□□□ 0.6
SCN4A-203ENST00000584310 CCDC57Q2TAC2 916 aa18.77■□□□□ 0.6
SCN4A-203ENST00000584310 HDAC5Q9UQL6 1122 aa18.77■□□□□ 0.6
SCN4A-203ENST00000584310 H7C1D1 291 aa18.76■□□□□ 0.59
SCN4A-203ENST00000584310 CXCL9Q07325 125 aa18.76■□□□□ 0.59
SCN4A-203ENST00000584310 USP50Q70EL3 339 aaPredicted RBP18.76■□□□□ 0.59
SCN4A-203ENST00000584310 MIER1Q8N108 512 aa18.76■□□□□ 0.59
SCN4A-203ENST00000584310 MRPL50Q8N5N7 158 aaKnown RBP18.76■□□□□ 0.59
SCN4A-203ENST00000584310 RAD17O75943 681 aa18.75■□□□□ 0.59
SCN4A-203ENST00000584310 SSH1Q8WYL5 1049 aa18.75■□□□□ 0.59
SCN4A-203ENST00000584310 CDCA7LQ96GN5 454 aa18.75■□□□□ 0.59
SCN4A-203ENST00000584310 ADARB2Q9NS39 739 aaKnown RBP18.75■□□□□ 0.59
SCN4A-203ENST00000584310 POLLQ9UGP5 575 aa18.75■□□□□ 0.59
SCN4A-203ENST00000584310 ECE2O60344 883 aa18.74■□□□□ 0.59
SCN4A-203ENST00000584310 HNRNPUQ00839 825 aaKnown RBP eCLIP18.74■□□□□ 0.59
SCN4A-203ENST00000584310 FAM161AQ3B820 660 aa18.74■□□□□ 0.59
SCN4A-203ENST00000584310 DBNDD1Q9H9R9 158 aa18.74■□□□□ 0.59
SCN4A-203ENST00000584310 SCN4AP35499 1836 aa18.74■□□□□ 0.59
SCN4A-203ENST00000584310 CSF1RP07333 972 aa18.73■□□□□ 0.59
SCN4A-203ENST00000584310 RPS12P25398 132 aaKnown RBP18.73■□□□□ 0.59
SCN4A-203ENST00000584310 API5Q9BZZ5 524 aaKnown RBP18.73■□□□□ 0.59
SCN4A-203ENST00000584310 GPRC5DQ9NZD1 345 aa18.73■□□□□ 0.59
SCN4A-203ENST00000584310 LEMD3Q9Y2U8 911 aa18.73■□□□□ 0.59
SCN4A-203ENST00000584310 GMPSP49915 693 aaPredicted RBP18.72■□□□□ 0.59
SCN4A-203ENST00000584310 DOK7Q18PE1 504 aa18.72■□□□□ 0.59
SCN4A-203ENST00000584310 MINPP1Q9UNW1 487 aa18.72■□□□□ 0.59
SCN4A-203ENST00000584310 KIF16BQ96L93 1317 aa18.72■□□□□ 0.59
SCN4A-203ENST00000584310 IPO8O15397 1037 aaKnown RBP18.71■□□□□ 0.59
SCN4A-203ENST00000584310 CCT4P50991 539 aaKnown RBP18.71■□□□□ 0.59
SCN4A-203ENST00000584310 SCNN1DP51172 638 aa18.71■□□□□ 0.59
SCN4A-203ENST00000584310 CASP7P55210 303 aa18.71■□□□□ 0.59
SCN4A-203ENST00000584310 LMBR1LQ6UX01 489 aa18.71■□□□□ 0.59
SCN4A-203ENST00000584310 PODNQ7Z5L7 613 aa18.71■□□□□ 0.59
SCN4A-203ENST00000584310 SLC51AQ86UW1 340 aa18.71■□□□□ 0.59
SCN4A-203ENST00000584310 TRMT2AQ8IZ69 625 aaKnown RBP18.71■□□□□ 0.59
SCN4A-203ENST00000584310 LRRC37AA6NMS7 1700 aa18.7■□□□□ 0.58
SCN4A-203ENST00000584310 EPS15P42566 896 aa18.7■□□□□ 0.58
SCN4A-203ENST00000584310 CNTROBQ8N137 903 aa18.7■□□□□ 0.58
SCN4A-203ENST00000584310 DPF2Q92785 391 aa18.7■□□□□ 0.58
SCN4A-203ENST00000584310 CNNM1Q9NRU3 951 aa18.7■□□□□ 0.58
SCN4A-203ENST00000584310 LDHAL6AQ6ZMR3 332 aa18.69■□□□□ 0.58
SCN4A-203ENST00000584310 CREBZFQ9NS37 354 aa18.69■□□□□ 0.58
SCN4A-203ENST00000584310 CNOT7Q9UIV1 285 aaKnown RBP18.69■□□□□ 0.58
SCN4A-203ENST00000584310 MED23Q9ULK4 1368 aa18.68■□□□□ 0.58
SCN4A-203ENST00000584310 PSMD14O00487 310 aa18.68■□□□□ 0.58
SCN4A-203ENST00000584310 COA1Q9GZY4 146 aa18.68■□□□□ 0.58
SCN4A-203ENST00000584310 ZNF804BA4D1E1 1349 aa18.68■□□□□ 0.58
SCN4A-203ENST00000584310 YDJCA8MPS7 323 aa18.67■□□□□ 0.58
SCN4A-203ENST00000584310 POTEIP0CG38 1075 aa18.67■□□□□ 0.58
SCN4A-203ENST00000584310 POTEJP0CG39 1038 aa18.67■□□□□ 0.58
SCN4A-203ENST00000584310 FOXO4P98177 505 aa18.67■□□□□ 0.58
SCN4A-203ENST00000584310 MAP1SQ66K74 1059 aaPredicted RBP18.67■□□□□ 0.58
SCN4A-203ENST00000584310 MICALL2Q8IY33 904 aa18.67■□□□□ 0.58
SCN4A-203ENST00000584310 ZC3H15Q8WU90 426 aaKnown RBP18.67■□□□□ 0.58
SCN4A-203ENST00000584310 FBXW7Q969H0 707 aa18.67■□□□□ 0.58
SCN4A-203ENST00000584310 COL4A5P29400 1685 aa18.66■□□□□ 0.58
SCN4A-203ENST00000584310 USP17L3A6NCW0 530 aa18.66■□□□□ 0.58
SCN4A-203ENST00000584310 USP17L4A6NCW7 530 aa18.66■□□□□ 0.58
SCN4A-203ENST00000584310 TMEM88BA6NKF7 163 aa18.66■□□□□ 0.58
SCN4A-203ENST00000584310 CHRNDQ07001 517 aa18.66■□□□□ 0.58
SCN4A-203ENST00000584310 USP17L1Q7RTZ2 530 aa18.66■□□□□ 0.58
SCN4A-203ENST00000584310 OGFOD1Q8N543 542 aa18.66■□□□□ 0.58
SCN4A-203ENST00000584310 KLRG1Q96E93 195 aa18.66■□□□□ 0.58
SCN4A-203ENST00000584310 GPR101Q96P66 508 aaPredicted RBP18.66■□□□□ 0.58
SCN4A-203ENST00000584310 NOB1Q9ULX3 412 aaKnown RBP18.66■□□□□ 0.58
SCN4A-203ENST00000584310 MYH3P11055 1940 aa18.66■□□□□ 0.58
SCN4A-203ENST00000584310 DUOX1Q9NRD9 1551 aa18.65■□□□□ 0.58
SCN4A-203ENST00000584310 BRPF1P55201 1214 aaPredicted RBP18.65■□□□□ 0.58
SCN4A-203ENST00000584310 AGBL3Q8NEM8 1001 aa18.65■□□□□ 0.58
SCN4A-203ENST00000584310 UTYO14607 1347 aa18.65■□□□□ 0.58
SCN4A-203ENST00000584310 MYO3BQ8WXR4 1341 aa18.65■□□□□ 0.58
SCN4A-203ENST00000584310 TAF1P21675 1872 aa18.65■□□□□ 0.58
SCN4A-203ENST00000584310 VIL1P09327 827 aaKnown RBP18.64■□□□□ 0.57
SCN4A-203ENST00000584310 NBPF7P0C2Y1 421 aaPredicted RBP18.64■□□□□ 0.57
SCN4A-203ENST00000584310 UBTFL1P0CB47 393 aaPredicted RBP18.64■□□□□ 0.57
SCN4A-203ENST00000584310 MMP14P50281 582 aa18.64■□□□□ 0.57
SCN4A-203ENST00000584310 RARSP54136 660 aaKnown RBP18.64■□□□□ 0.57
SCN4A-203ENST00000584310 ZNF804AQ7Z570 1209 aa18.64■□□□□ 0.57
SCN4A-203ENST00000584310 ARHGAP45Q92619 1136 aa18.64■□□□□ 0.57
SCN4A-203ENST00000584310 SUCLG2Q96I99 432 aa18.64■□□□□ 0.57
SCN4A-203ENST00000584310 ZBTB12Q9Y330 459 aaPredicted RBP18.64■□□□□ 0.57
SCN4A-203ENST00000584310 PLIN1O60240 522 aa18.63■□□□□ 0.57
SCN4A-203ENST00000584310 RSBN1LQ6PCB5 846 aaPredicted RBP18.63■□□□□ 0.57
SCN4A-203ENST00000584310 DCPSQ96C86 337 aaKnown RBP18.63■□□□□ 0.57
SCN4A-203ENST00000584310 CDC37L1Q7L3B6 337 aa18.62■□□□□ 0.57
SCN4A-203ENST00000584310 BICC1Q9H694 974 aaKnown RBP18.62■□□□□ 0.57
SCN4A-203ENST00000584310 HDAC9Q9UKV0 1011 aa18.62■□□□□ 0.57
SCN4A-203ENST00000584310 ABT1Q9ULW3 272 aaKnown RBP18.62■□□□□ 0.57
SCN4A-203ENST00000584310 MROH5Q6ZUA9 1318 aa18.62■□□□□ 0.57
SCN4A-203ENST00000584310 PASKQ96RG2 1323 aa18.61■□□□□ 0.57
SCN4A-203ENST00000584310 ITGBL1O95965 494 aaPredicted RBP18.61■□□□□ 0.57
SCN4A-203ENST00000584310 USP17L8P0C7I0 530 aa18.61■□□□□ 0.57
SCN4A-203ENST00000584310 HTRA3P83110 453 aa18.61■□□□□ 0.57
SCN4A-203ENST00000584310 RBM26Q5T8P6 1007 aaKnown RBP18.61■□□□□ 0.57
SCN4A-203ENST00000584310 VPS37DQ86XT2 251 aa18.61■□□□□ 0.57
SCN4A-203ENST00000584310 FRAT1Q92837 279 aaPredicted RBP18.61■□□□□ 0.57
SCN4A-203ENST00000584310 GNAI3P08754 354 aa18.6■□□□□ 0.57
SCN4A-203ENST00000584310 KIF4BQ2VIQ3 1234 aa18.6■□□□□ 0.57
SCN4A-203ENST00000584310 EPHA10Q5JZY3 1008 aa18.6■□□□□ 0.57
SCN4A-203ENST00000584310 STRIP1Q5VSL9 837 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms