RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 C8orf58Q8NAV2 365 aa20.23■□□□□ 0.83
SKA2-209ENST00000583976 CCDC85AQ96PX6 553 aaPredicted RBP20.23■□□□□ 0.83
SKA2-209ENST00000583976 PSME4Q14997 1843 aa20.23■□□□□ 0.83
SKA2-209ENST00000583976 TRIM28Q13263 835 aaKnown RBP20.22■□□□□ 0.83
SKA2-209ENST00000583976 TBC1D10BQ4KMP7 808 aaPredicted RBP20.22■□□□□ 0.83
SKA2-209ENST00000583976 TBC1D16Q8TBP0 767 aa20.22■□□□□ 0.83
SKA2-209ENST00000583976 ZBTB38Q8NAP3 1195 aaPredicted RBP20.21■□□□□ 0.83
SKA2-209ENST00000583976 ZNF646O15015 1829 aaPredicted RBP20.19■□□□□ 0.82
SKA2-209ENST00000583976 ADM5C9JUS6 153 aa20.19■□□□□ 0.82
SKA2-209ENST00000583976 H7C1D1 291 aa20.19■□□□□ 0.82
SKA2-209ENST00000583976 UFL1O94874 794 aa20.19■□□□□ 0.82
SKA2-209ENST00000583976 RPS8P62241 208 aaKnown RBP20.19■□□□□ 0.82
SKA2-209ENST00000583976 GNAI1P63096 354 aa20.19■□□□□ 0.82
SKA2-209ENST00000583976 USP48Q86UV5 1035 aa20.19■□□□□ 0.82
SKA2-209ENST00000583976 TSPYL6Q8N831 410 aa20.19■□□□□ 0.82
SKA2-209ENST00000583976 ZC3H15Q8WU90 426 aaKnown RBP20.19■□□□□ 0.82
SKA2-209ENST00000583976 ASTN2O75129 1339 aaPredicted RBP20.19■□□□□ 0.82
SKA2-209ENST00000583976 MYH3P11055 1940 aa20.19■□□□□ 0.82
SKA2-209ENST00000583976 POLR2AP24928 1970 aaKnown RBP20.18■□□□□ 0.82
SKA2-209ENST00000583976 CDC37L1Q7L3B6 337 aa20.18■□□□□ 0.82
SKA2-209ENST00000583976 TSR2Q969E8 191 aaKnown RBP20.18■□□□□ 0.82
SKA2-209ENST00000583976 ABHD8Q96I13 439 aa20.18■□□□□ 0.82
SKA2-209ENST00000583976 ZIC5Q96T25 663 aa20.18■□□□□ 0.82
SKA2-209ENST00000583976 RBM26Q5T8P6 1007 aaKnown RBP20.17■□□□□ 0.82
SKA2-209ENST00000583976 DPF2Q92785 391 aa20.17■□□□□ 0.82
SKA2-209ENST00000583976 EYA3Q99504 573 aa20.17■□□□□ 0.82
SKA2-209ENST00000583976 PCCAP05165 728 aaPredicted RBP20.16■□□□□ 0.82
SKA2-209ENST00000583976 KIF4BQ2VIQ3 1234 aa20.16■□□□□ 0.82
SKA2-209ENST00000583976 BEGAINQ9BUH8 593 aa20.16■□□□□ 0.82
SKA2-209ENST00000583976 CWC25Q9NXE8 425 aaPredicted RBP20.16■□□□□ 0.82
SKA2-209ENST00000583976 CALD1Q05682 793 aaKnown RBP20.15■□□□□ 0.82
SKA2-209ENST00000583976 KRT26Q7Z3Y9 468 aa20.15■□□□□ 0.82
SKA2-209ENST00000583976 CCDC191Q8NCU4 936 aa20.15■□□□□ 0.82
SKA2-209ENST00000583976 METTL22Q9BUU2 404 aaPredicted RBP20.15■□□□□ 0.82
SKA2-209ENST00000583976 GGA3Q9NZ52 723 aa20.15■□□□□ 0.82
SKA2-209ENST00000583976 PODXL2Q9NZ53 605 aa20.15■□□□□ 0.82
SKA2-209ENST00000583976 ANKIB1Q9P2G1 1089 aa20.15■□□□□ 0.82
SKA2-209ENST00000583976 MAP3K2Q9Y2U5 619 aa20.15■□□□□ 0.82
SKA2-209ENST00000583976 SALL2Q9Y467 1007 aaPredicted RBP20.15■□□□□ 0.82
SKA2-209ENST00000583976 RPS12P25398 132 aaKnown RBP20.14■□□□□ 0.81
SKA2-209ENST00000583976 MAP2K2P36507 400 aa20.14■□□□□ 0.81
SKA2-209ENST00000583976 HUNKP57058 714 aa20.14■□□□□ 0.81
SKA2-209ENST00000583976 CCDC152Q4G0S7 254 aa20.14■□□□□ 0.81
SKA2-209ENST00000583976 HHIPL1Q96JK4 782 aa20.14■□□□□ 0.81
SKA2-209ENST00000583976 GGA1Q9UJY5 639 aa20.14■□□□□ 0.81
SKA2-209ENST00000583976 CASP8AP2Q9UKL3 1982 aa20.14■□□□□ 0.81
SKA2-209ENST00000583976 ZNF609O15014 1411 aa20.13■□□□□ 0.81
SKA2-209ENST00000583976 WTIPA6NIX2 430 aaPredicted RBP20.13■□□□□ 0.81
SKA2-209ENST00000583976 PDE8AO60658 829 aa20.13■□□□□ 0.81
SKA2-209ENST00000583976 IGKV5-2P06315 115 aa20.13■□□□□ 0.81
SKA2-209ENST00000583976 BRPF1P55201 1214 aaPredicted RBP20.13■□□□□ 0.81
SKA2-209ENST00000583976 CTSWP56202 376 aa20.12■□□□□ 0.81
SKA2-209ENST00000583976 CCDC30Q5VVM6 783 aa20.12■□□□□ 0.81
SKA2-209ENST00000583976 ZC3H12CQ9C0D7 883 aaKnown RBP20.12■□□□□ 0.81
SKA2-209ENST00000583976 DDX58O95786 925 aaKnown RBP20.11■□□□□ 0.81
SKA2-209ENST00000583976 VIL1P09327 827 aaKnown RBP20.11■□□□□ 0.81
SKA2-209ENST00000583976 CWF19L2Q2TBE0 894 aaKnown RBP20.11■□□□□ 0.81
SKA2-209ENST00000583976 GBA2Q9HCG7 927 aaPredicted RBP20.11■□□□□ 0.81
SKA2-209ENST00000583976 XDHP47989 1333 aa20.1■□□□□ 0.81
SKA2-209ENST00000583976 PI4KAP2A4QPH2 592 aa20.1■□□□□ 0.81
SKA2-209ENST00000583976 G2E3Q7L622 706 aa20.1■□□□□ 0.81
SKA2-209ENST00000583976 ANKRD18AQ8IVF6 992 aa20.1■□□□□ 0.81
SKA2-209ENST00000583976 PI4KAP1Q8N8J0 262 aa20.1■□□□□ 0.81
SKA2-209ENST00000583976 GREM2Q9H772 168 aa20.1■□□□□ 0.81
SKA2-209ENST00000583976 A0A1B0GUL6 1792 aa20.09■□□□□ 0.81
SKA2-209ENST00000583976 FAM155AB1AL88 458 aaPredicted RBP20.09■□□□□ 0.81
SKA2-209ENST00000583976 RSBN1LQ6PCB5 846 aaPredicted RBP20.09■□□□□ 0.81
SKA2-209ENST00000583976 DCPSQ96C86 337 aaKnown RBP20.09■□□□□ 0.81
SKA2-209ENST00000583976 SCAF8Q9UPN6 1271 aaKnown RBP20.09■□□□□ 0.81
SKA2-209ENST00000583976 G3V3G9 751 aa20.08■□□□□ 0.81
SKA2-209ENST00000583976 HSP90B1P14625 803 aaKnown RBP20.08■□□□□ 0.81
SKA2-209ENST00000583976 NOGQ13253 232 aa20.08■□□□□ 0.81
SKA2-209ENST00000583976 DCAF8Q5TAQ9 597 aa20.08■□□□□ 0.81
SKA2-209ENST00000583976 KSR2Q6VAB6 950 aa20.08■□□□□ 0.81
SKA2-209ENST00000583976 CDCA5Q96FF9 252 aa20.08■□□□□ 0.81
SKA2-209ENST00000583976 PAPPA2Q9BXP8 1791 aa20.08■□□□□ 0.8
SKA2-209ENST00000583976 ZNF280AP59817 542 aaPredicted RBP20.07■□□□□ 0.8
SKA2-209ENST00000583976 FAM161AQ3B820 660 aa20.07■□□□□ 0.8
SKA2-209ENST00000583976 ANGEL2Q5VTE6 544 aaKnown RBP20.07■□□□□ 0.8
SKA2-209ENST00000583976 RGMBQ6NW40 437 aa20.07■□□□□ 0.8
SKA2-209ENST00000583976 MXD3Q9BW11 206 aa20.07■□□□□ 0.8
SKA2-209ENST00000583976 MED23Q9ULK4 1368 aa20.07■□□□□ 0.8
SKA2-209ENST00000583976 CCDC85CA6NKD9 419 aa20.06■□□□□ 0.8
SKA2-209ENST00000583976 NEURL1BA8MQ27 555 aa20.06■□□□□ 0.8
SKA2-209ENST00000583976 CA12O43570 354 aa20.06■□□□□ 0.8
SKA2-209ENST00000583976 SULF1Q8IWU6 871 aa20.06■□□□□ 0.8
SKA2-209ENST00000583976 TTLL11Q8NHH1 800 aa20.06■□□□□ 0.8
SKA2-209ENST00000583976 GMLQ99445 158 aa20.06■□□□□ 0.8
SKA2-209ENST00000583976 CDC5LQ99459 802 aaKnown RBP20.06■□□□□ 0.8
SKA2-209ENST00000583976 ATP2B4P23634 1241 aa20.05■□□□□ 0.8
SKA2-209ENST00000583976 KLRK1P26718 216 aa20.05■□□□□ 0.8
SKA2-209ENST00000583976 TWISTNBQ3B726 338 aaPredicted RBP20.05■□□□□ 0.8
SKA2-209ENST00000583976 UBE3BQ7Z3V4 1068 aa20.05■□□□□ 0.8
SKA2-209ENST00000583976 WWC1Q8IX03 1113 aa20.05■□□□□ 0.8
SKA2-209ENST00000583976 STK31Q9BXU1 1019 aa20.05■□□□□ 0.8
SKA2-209ENST00000583976 MCOLN1Q9GZU1 580 aa20.05■□□□□ 0.8
SKA2-209ENST00000583976 SCARF1Q14162 830 aa20.04■□□□□ 0.8
SKA2-209ENST00000583976 C2orf69Q8N8R5 385 aa20.04■□□□□ 0.8
SKA2-209ENST00000583976 AGBL3Q8NEM8 1001 aa20.04■□□□□ 0.8
SKA2-209ENST00000583976 FANCIQ9NVI1 1328 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms