RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 TJAP1Q5JTD0 557 aa7.14□□□□□ -1.27
VAPA-207ENST00000583879 SYNE4Q8N205 404 aa7.14□□□□□ -1.27
VAPA-207ENST00000583879 CEMIPQ8WUJ3 1361 aa7.14□□□□□ -1.27
VAPA-207ENST00000583879 ZNF652Q9Y2D9 606 aa7.14□□□□□ -1.27
VAPA-207ENST00000583879 ZNF541Q9H0D2 1346 aa7.13□□□□□ -1.27
VAPA-207ENST00000583879 NBPF26B4DH59 902 aa7.13□□□□□ -1.27
VAPA-207ENST00000583879 NRG2O14511 850 aaPredicted RBP7.13□□□□□ -1.27
VAPA-207ENST00000583879 PRKAR2BP31323 418 aa7.13□□□□□ -1.27
VAPA-207ENST00000583879 IARSP41252 1262 aaKnown RBP7.13□□□□□ -1.27
VAPA-207ENST00000583879 MAP2K1Q02750 393 aaPredicted RBP7.13□□□□□ -1.27
VAPA-207ENST00000583879 MAP1SQ66K74 1059 aaPredicted RBP7.13□□□□□ -1.27
VAPA-207ENST00000583879 NBPF10Q6P3W6 841 aaKnown RBP7.13□□□□□ -1.27
VAPA-207ENST00000583879 OLFM4Q6UX06 510 aa7.13□□□□□ -1.27
VAPA-207ENST00000583879 SAMD7Q7Z3H4 446 aa7.13□□□□□ -1.27
VAPA-207ENST00000583879 GPC2Q8N158 579 aa7.13□□□□□ -1.27
VAPA-207ENST00000583879 NBPF15Q8N660 670 aa7.13□□□□□ -1.27
VAPA-207ENST00000583879 IL21Q9HBE4 155 aa7.13□□□□□ -1.27
VAPA-207ENST00000583879 NIP7Q9Y221 180 aaKnown RBP eCLIP7.13□□□□□ -1.27
VAPA-207ENST00000583879 RNF123Q5XPI4 1314 aa7.12□□□□□ -1.27
VAPA-207ENST00000583879 WDR33Q9C0J8 1336 aaKnown RBP7.12□□□□□ -1.27
VAPA-207ENST00000583879 FAM177BA6PVY3 158 aa7.12□□□□□ -1.27
VAPA-207ENST00000583879 GTF2E1P29083 439 aaPredicted RBP7.12□□□□□ -1.27
VAPA-207ENST00000583879 CNGB1Q14028 1251 aaPredicted RBP7.12□□□□□ -1.27
VAPA-207ENST00000583879 HLFQ16534 295 aa7.12□□□□□ -1.27
VAPA-207ENST00000583879 PPP1R18Q6NYC8 613 aa7.12□□□□□ -1.27
VAPA-207ENST00000583879 JDP2Q8WYK2 163 aa7.12□□□□□ -1.27
VAPA-207ENST00000583879 CDCA7LQ96GN5 454 aa7.12□□□□□ -1.27
VAPA-207ENST00000583879 PSMD1Q99460 953 aa7.12□□□□□ -1.27
VAPA-207ENST00000583879 MTRQ99707 1265 aa7.12□□□□□ -1.27
VAPA-207ENST00000583879 RSPH6AQ9H0K4 717 aa7.12□□□□□ -1.27
VAPA-207ENST00000583879 WDR70Q9NW82 654 aa7.12□□□□□ -1.27
VAPA-207ENST00000583879 V9GY48 417 aaPredicted RBP7.12□□□□□ -1.27
VAPA-207ENST00000583879 DLEC1Q9Y238 1755 aa7.12□□□□□ -1.27
VAPA-207ENST00000583879 NPC1L1Q9UHC9 1359 aa7.11□□□□□ -1.27
VAPA-207ENST00000583879 SMAPO00193 183 aa7.11□□□□□ -1.27
VAPA-207ENST00000583879 HTATSF1O43719 755 aaKnown RBP7.11□□□□□ -1.27
VAPA-207ENST00000583879 HSPA8P11142 646 aaKnown RBP7.11□□□□□ -1.27
VAPA-207ENST00000583879 EIF6P56537 245 aaKnown RBP7.11□□□□□ -1.27
VAPA-207ENST00000583879 PRSS12P56730 875 aa7.11□□□□□ -1.27
VAPA-207ENST00000583879 CC2D2BQ6DHV5 1058 aa7.11□□□□□ -1.27
VAPA-207ENST00000583879 MCM10Q7L590 875 aa7.11□□□□□ -1.27
VAPA-207ENST00000583879 RTF1Q92541 710 aaKnown RBP7.11□□□□□ -1.27
VAPA-207ENST00000583879 ABHD8Q96I13 439 aa7.11□□□□□ -1.27
VAPA-207ENST00000583879 CFAP53Q96M91 514 aa7.11□□□□□ -1.27
VAPA-207ENST00000583879 DDX21Q9NR30 783 aaKnown RBP eCLIP7.11□□□□□ -1.27
VAPA-207ENST00000583879 ABT1Q9ULW3 272 aaKnown RBP7.11□□□□□ -1.27
VAPA-207ENST00000583879 NUDCQ9Y266 331 aa7.11□□□□□ -1.27
VAPA-207ENST00000583879 TIAM2Q8IVF5 1701 aa7.1□□□□□ -1.27
VAPA-207ENST00000583879 ERVV-1B6SEH8 477 aa7.1□□□□□ -1.27
VAPA-207ENST00000583879 HOXA10P31260 410 aaPredicted RBP7.1□□□□□ -1.27
VAPA-207ENST00000583879 DCTN1Q14203 1278 aa7.1□□□□□ -1.27
VAPA-207ENST00000583879 PDIA6Q15084 440 aa7.1□□□□□ -1.27
VAPA-207ENST00000583879 TAF7Q15545 349 aaPredicted RBP7.1□□□□□ -1.27
VAPA-207ENST00000583879 CRY2Q49AN0 593 aa7.1□□□□□ -1.27
VAPA-207ENST00000583879 GRIPAP1Q4V328 841 aa7.1□□□□□ -1.27
VAPA-207ENST00000583879 CCER1Q8TC90 406 aaPredicted RBP7.1□□□□□ -1.27
VAPA-207ENST00000583879 GPR101Q96P66 508 aaPredicted RBP7.1□□□□□ -1.27
VAPA-207ENST00000583879 NYXQ9GZU5 481 aa7.1□□□□□ -1.27
VAPA-207ENST00000583879 GJA3Q9Y6H8 435 aa7.1□□□□□ -1.27
VAPA-207ENST00000583879 FER1L6Q2WGJ9 1857 aa7.1□□□□□ -1.27
VAPA-207ENST00000583879 SLX4Q8IY92 1834 aa7.1□□□□□ -1.27
VAPA-207ENST00000583879 ANKRD31Q8N7Z5 1873 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 SPDYE16A6NNV3 312 aaPredicted RBP7.09□□□□□ -1.27
VAPA-207ENST00000583879 U2AF1L5P0DN76 240 aaPredicted RBP7.09□□□□□ -1.27
VAPA-207ENST00000583879 LMOD1P29536 600 aaPredicted RBP7.09□□□□□ -1.27
VAPA-207ENST00000583879 EPS15P42566 896 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 ECE1P42892 770 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 SCNN1DP51172 638 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 U2AF1Q01081 240 aaKnown RBP eCLIP7.09□□□□□ -1.271e-9■■□□□ 13.1
VAPA-207ENST00000583879 FMR1Q06787 632 aaKnown RBP eCLIP7.09□□□□□ -1.27
VAPA-207ENST00000583879 CST9Q5W186 159 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 USP50Q70EL3 339 aaPredicted RBP7.09□□□□□ -1.27
VAPA-207ENST00000583879 NUTM1Q86Y26 1132 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 NGEFQ8N5V2 710 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 CAPNS2Q96L46 248 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 BEGAINQ9BUH8 593 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.09□□□□□ -1.27
VAPA-207ENST00000583879 MIS18AQ9NYP9 233 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 PNMA3Q9UL41 463 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 UBR2Q8IWV8 1755 aa7.09□□□□□ -1.27
VAPA-207ENST00000583879 COL3A1P02461 1466 aaPredicted RBP7.09□□□□□ -1.27
VAPA-207ENST00000583879 CCDC88AQ3V6T2 1871 aa7.09□□□□□ -1.28
VAPA-207ENST00000583879 CCDC85CA6NKD9 419 aa7.08□□□□□ -1.28
VAPA-207ENST00000583879 RNF40O75150 1001 aa7.08□□□□□ -1.28
VAPA-207ENST00000583879 MAP2K2P36507 400 aa7.08□□□□□ -1.28
VAPA-207ENST00000583879 RGS19P49795 217 aa7.08□□□□□ -1.28
VAPA-207ENST00000583879 FAM161AQ3B820 660 aa7.08□□□□□ -1.28
VAPA-207ENST00000583879 SUSD4Q5VX71 490 aa7.08□□□□□ -1.28
VAPA-207ENST00000583879 CYP4F22Q6NT55 531 aa7.08□□□□□ -1.28
VAPA-207ENST00000583879 LARGE2Q8N3Y3 721 aa7.08□□□□□ -1.28
VAPA-207ENST00000583879 PNISRQ8TF01 805 aaKnown RBP7.08□□□□□ -1.28
VAPA-207ENST00000583879 RPGRQ92834 1020 aaKnown RBP7.08□□□□□ -1.28
VAPA-207ENST00000583879 TATDN2Q93075 761 aa7.08□□□□□ -1.28
VAPA-207ENST00000583879 RBM17Q96I25 401 aaKnown RBP7.08□□□□□ -1.28
VAPA-207ENST00000583879 CRAMP1Q96RY5 1269 aa7.08□□□□□ -1.28
VAPA-207ENST00000583879 VPS33BQ9H267 617 aa7.08□□□□□ -1.28
VAPA-207ENST00000583879 DICER1Q9UPY3 1922 aaKnown RBP7.07□□□□□ -1.28
VAPA-207ENST00000583879 COL11A2P13942 1736 aaPredicted RBP7.07□□□□□ -1.28
VAPA-207ENST00000583879 MAP3K15Q6ZN16 1313 aa7.07□□□□□ -1.28
VAPA-207ENST00000583879 SCN7AQ01118 1682 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms