RNA–Protein interactions for RNA: ENST00000583705.1

MSI2-217, Transcript of musashi RNA binding protein 2, human

Gene MSI2, Length 7,612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-217	ENST00000583705	AQR	O60306	1485 aa	Known RBP eCLIP	12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	TMPO	P42166	694 aa	Known RBP	12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	ZNF804A	Q7Z570	1209 aa		12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	AGTPBP1	Q9UPW5	1226 aa		12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	N4BP3	O15049	544 aa		12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	CHMP2A	O43633	222 aa		12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	CCDC172	P0C7W6	258 aa		12.84	□□□□□ -0.35
MSI2-217	ENST00000583705		B4DLN1	442 aa		12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	AKR1B10	O60218	316 aa		12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	MRPL12	P52815	198 aa	Known RBP	12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	CKAP4	Q07065	602 aa	Known RBP	12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	PPP1R9B	Q96SB3	815 aa		12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	NLRP3	Q96P20	1036 aa		12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	AKNA	Q7Z591	1439 aa		12.84	□□□□□ -0.35
MSI2-217	ENST00000583705	GMNN	O75496	209 aa		12.83	□□□□□ -0.35
MSI2-217	ENST00000583705	IFI16	Q16666	785 aa	Known RBP	12.83	□□□□□ -0.35
MSI2-217	ENST00000583705	NAA16	Q6N069	864 aa	Predicted RBP	12.83	□□□□□ -0.35
MSI2-217	ENST00000583705	RPUSD2	Q8IZ73	545 aa	Known RBP	12.83	□□□□□ -0.35
MSI2-217	ENST00000583705	ZNF526	Q8TF50	670 aa	Predicted RBP	12.83	□□□□□ -0.35
MSI2-217	ENST00000583705	CCDC183	Q5T5S1	534 aa		12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	ASIC1	P78348	528 aa		12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	DCAF17	Q5H9S7	520 aa	Predicted RBP	12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	MIGA1	Q8NAN2	632 aa		12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	DDX39A	O00148	427 aa	Known RBP	12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	TNNI2	P48788	182 aa		12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	EIF6	P56537	245 aa	Known RBP	12.83	□□□□□ -0.36
MSI2-217	ENST00000583705		E7EVH7	732 aa		12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	SORBS3	O60504	671 aa		12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	NCOA7	Q8NI08	942 aa		12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	PLVAP	Q9BX97	442 aa		12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	PHF8	Q9UPP1	1060 aa		12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	AMOTL2	Q9Y2J4	779 aa		12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	AFG3L2	Q9Y4W6	797 aa		12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	CGN	Q9P2M7	1197 aa	Known RBP	12.83	□□□□□ -0.36
MSI2-217	ENST00000583705	NSD3	Q9BZ95	1437 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	PPP4R4	Q6NUP7	873 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	TMOD4	Q9NZQ9	345 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	CNGA1	P29973	690 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	GTF2F1	P35269	517 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	PPARD	Q03181	441 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	GPR162	Q16538	588 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	C4orf50	Q6ZRC1	276 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	CHST3	Q7LGC8	479 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	FCHSD2	O94868	740 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	FAM47C	Q5HY64	1035 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	GSDMB	Q8TAX9	411 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	PPME1	Q9Y570	386 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	BRD4	O60885	1362 aa	Predicted RBP	12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	NOP56	O00567	594 aa	Known RBP	12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	SELENOO	Q9BVL4	669 aa		12.82	□□□□□ -0.36
MSI2-217	ENST00000583705	PDE3A	Q14432	1141 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	CCDC61	Q9Y6R9	512 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	MYCL	P12524	364 aa	Predicted RBP	12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	WDR63	Q8IWG1	891 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	RNF169	Q8NCN4	708 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	IL27	Q8NEV9	243 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	HELB	Q8NG08	1087 aa	Predicted RBP	12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	FAM200A	Q8TCP9	573 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	CAPZA3	Q96KX2	299 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	MARCKS	P29966	332 aa	Predicted RBP	12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	CCDC14	Q49A88	953 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	KCNK9	Q9NPC2	374 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	RASAL2	Q9UJF2	1139 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	CCDC169	A6NNP5	214 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	PPP1R12A	O14974	1030 aa	Predicted RBP	12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	TOM1	O60784	492 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	MCM7	P33993	719 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	BIRC3	Q13489	604 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	NAA25	Q14CX7	972 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	PSMD6	Q15008	389 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	IVNS1ABP	Q9Y6Y0	642 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	SPDYE16	A6NNV3	312 aa	Predicted RBP	12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	SPDYE2	Q495Y8	402 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	CCDC89	Q8N998	374 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	LRRC27	Q9C0I9	530 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	ANKRD24	Q8TF21	1146 aa		12.81	□□□□□ -0.36
MSI2-217	ENST00000583705	MAGEB6P1	A0A0J9YX57	407 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	SMC6	Q96SB8	1091 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	RTCB	Q9Y3I0	505 aa	Known RBP	12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	USP25	Q9UHP3	1055 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	KLF18	A0A0U1RQI7	1052 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	SLC39A6	Q13433	755 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	RTN1	Q16799	776 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	RSPH3	Q86UC2	560 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	ZGPAT	Q8N5A5	531 aa	Known RBP	12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	FANCI	Q9NVI1	1328 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	STK25	O00506	426 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	ERCC3	P19447	782 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	IFRD2	Q12894	506 aa	Predicted RBP	12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	DIXDC1	Q155Q3	683 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	SEPT14	Q6ZU15	432 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	GOLGA1	Q92805	767 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	MCM9	Q9NXL9	1143 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	RAPGEF1	Q13905	1077 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	PPP1R7	Q15435	360 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	GPCPD1	Q9NPB8	672 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	PTPDC1	A2A3K4	754 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	NBPF7	P0C2Y1	421 aa	Predicted RBP	12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	IFNL2	Q8IZJ0	200 aa		12.8	□□□□□ -0.36
MSI2-217	ENST00000583705	CABLES1	Q8TDN4	633 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms