RNA–Protein interactions for RNA: ENST00000583527.1

CRLF3-204, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 378 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-204ENST00000583527 RUFY2Q8WXA3 655 aa6.66□□□□□ -1.34
CRLF3-204ENST00000583527 EDC3Q96F86 508 aaKnown RBP6.66□□□□□ -1.34
CRLF3-204ENST00000583527 FAM89AQ96GI7 184 aa6.66□□□□□ -1.34
CRLF3-204ENST00000583527 ZNF594Q96JF6 807 aaPredicted RBP6.66□□□□□ -1.34
CRLF3-204ENST00000583527 DNAJC2Q99543 621 aaKnown RBP6.66□□□□□ -1.34
CRLF3-204ENST00000583527 GPR108Q9NPR9 543 aa6.66□□□□□ -1.34
CRLF3-204ENST00000583527 SNRKQ9NRH2 765 aa6.66□□□□□ -1.34
CRLF3-204ENST00000583527 USP21Q9UK80 565 aa6.66□□□□□ -1.34
CRLF3-204ENST00000583527 SH3TC1Q8TE82 1336 aa6.66□□□□□ -1.34
CRLF3-204ENST00000583527 DUOX1Q9NRD9 1551 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 COL11A2P13942 1736 aaPredicted RBP6.65□□□□□ -1.34
CRLF3-204ENST00000583527 A0A1B0GUL7 405 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 POTEB2H3BUK9 544 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 IRS4O14654 1257 aaPredicted RBP6.65□□□□□ -1.34
CRLF3-204ENST00000583527 NTSR2O95665 410 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 CD44P16070 742 aaKnown RBP6.65□□□□□ -1.34
CRLF3-204ENST00000583527 CCDC57Q2TAC2 916 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 TAF7LQ5H9L4 462 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 DDX46Q7L014 1031 aaKnown RBP6.65□□□□□ -1.34
CRLF3-204ENST00000583527 FAM227BQ96M60 508 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 CCDC85AQ96PX6 553 aaPredicted RBP6.65□□□□□ -1.34
CRLF3-204ENST00000583527 ARXQ96QS3 562 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 HAUS7Q99871 368 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 UPF3BQ9BZI7 483 aaKnown RBP6.65□□□□□ -1.34
CRLF3-204ENST00000583527 BOLA2Q9H3K6 86 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 GREM2Q9H772 168 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 FBXO3Q9UK99 471 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 TBC1D2BQ9UPU7 963 aa6.65□□□□□ -1.34
CRLF3-204ENST00000583527 CSF1RP07333 972 aa6.64□□□□□ -1.35
CRLF3-204ENST00000583527 ADORA1P30542 326 aa6.64□□□□□ -1.35
CRLF3-204ENST00000583527 IFIT5Q13325 482 aaKnown RBP6.64□□□□□ -1.35
CRLF3-204ENST00000583527 PARP10Q53GL7 1025 aa6.64□□□□□ -1.35
CRLF3-204ENST00000583527 KIAA1211Q6ZU35 1233 aa6.64□□□□□ -1.35
CRLF3-204ENST00000583527 ZNF589Q86UQ0 364 aaPredicted RBP6.64□□□□□ -1.35
CRLF3-204ENST00000583527 ZNF34Q8IZ26 560 aa6.64□□□□□ -1.35
CRLF3-204ENST00000583527 SYNE4Q8N205 404 aa6.64□□□□□ -1.35
CRLF3-204ENST00000583527 PUS3Q9BZE2 481 aaKnown RBP6.64□□□□□ -1.35
CRLF3-204ENST00000583527 FOXD4L1Q9NU39 408 aa6.64□□□□□ -1.35
CRLF3-204ENST00000583527 TRMT112Q9UI30 125 aaKnown RBP6.64□□□□□ -1.35
CRLF3-204ENST00000583527 ZNF652Q9Y2D9 606 aa6.64□□□□□ -1.35
CRLF3-204ENST00000583527 RBM8AQ9Y5S9 174 aaKnown RBP6.64□□□□□ -1.35
CRLF3-204ENST00000583527 SNX14Q9Y5W7 946 aa6.64□□□□□ -1.35
CRLF3-204ENST00000583527 NDUFB9Q9Y6M9 179 aa6.64□□□□□ -1.35
CRLF3-204ENST00000583527 COL1A1P02452 1464 aaPredicted RBP6.64□□□□□ -1.35
CRLF3-204ENST00000583527 ANKRD31Q8N7Z5 1873 aa6.64□□□□□ -1.35
CRLF3-204ENST00000583527 ANKRD18BA2A2Z9 1011 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 DDX11L8A8MPP1 907 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 MAST3O60307 1309 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 PDE8AO60658 829 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 ITGA6P23229 1130 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 MCM2P49736 904 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 NEK4P51957 841 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 PTH1RQ03431 593 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 CACNA1SQ13698 1873 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 LTBP1Q14766 1721 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 RAB3GAP1Q15042 981 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 ATP2B3Q16720 1220 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 METTL24Q5JXM2 366 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 PRPF40BQ6NWY9 871 aaKnown RBP6.63□□□□□ -1.35
CRLF3-204ENST00000583527 NOL8Q76FK4 1167 aaKnown RBP6.63□□□□□ -1.35
CRLF3-204ENST00000583527 PTF1AQ7RTS3 328 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 VGLL2Q8N8G2 317 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 KBTBD3Q8NAB2 608 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 NAV1Q8NEY1 1877 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 TTLL11Q8NHH1 800 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.63□□□□□ -1.35
CRLF3-204ENST00000583527 PAG1Q9NWQ8 432 aa6.63□□□□□ -1.35
CRLF3-204ENST00000583527 CCDC88AQ3V6T2 1871 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 QSER1Q2KHR3 1735 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 NRXN2Q9P2S2 1712 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 GOLIM4O00461 696 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 RGL2O15211 777 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 SSFA2P28290 1259 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 TTC39AQ5SRH9 613 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 SUSD4Q5VX71 490 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 RASEFQ8IZ41 740 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 ZGPATQ8N5A5 531 aaKnown RBP6.62□□□□□ -1.35
CRLF3-204ENST00000583527 KCNB2Q92953 911 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 TMX3Q96JJ7 454 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 AK7Q96M32 723 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 JAKMIP1Q96N16 626 aaKnown RBP6.62□□□□□ -1.35
CRLF3-204ENST00000583527 DCBLD2Q96PD2 775 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 UTP14AQ9BVJ6 771 aaKnown RBP6.62□□□□□ -1.35
CRLF3-204ENST00000583527 CNNM1Q9NRU3 951 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 CEP126Q9P2H0 1117 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 CCNL1Q9UK58 526 aaPredicted RBP6.62□□□□□ -1.35
CRLF3-204ENST00000583527 NIP7Q9Y221 180 aaKnown RBP eCLIP6.62□□□□□ -1.35
CRLF3-204ENST00000583527 TCHHQ07283 1943 aa6.62□□□□□ -1.35
CRLF3-204ENST00000583527 DDX60LQ5H9U9 1706 aaKnown RBP6.62□□□□□ -1.35
CRLF3-204ENST00000583527 MROH5Q6ZUA9 1318 aa6.61□□□□□ -1.35
CRLF3-204ENST00000583527 FAM177BA6PVY3 158 aa6.61□□□□□ -1.35
CRLF3-204ENST00000583527 SLC27A2O14975 620 aa6.61□□□□□ -1.35
CRLF3-204ENST00000583527 GNPATO15228 680 aa6.61□□□□□ -1.35
CRLF3-204ENST00000583527 CHGBP05060 677 aa6.61□□□□□ -1.35
CRLF3-204ENST00000583527 CYP2E1P05181 493 aaPredicted RBP6.61□□□□□ -1.35
CRLF3-204ENST00000583527 IFIT1P09914 478 aaKnown RBP6.61□□□□□ -1.35
CRLF3-204ENST00000583527 HCLS1P14317 486 aaPredicted RBP6.61□□□□□ -1.35
CRLF3-204ENST00000583527 CASTP20810 708 aaKnown RBP6.61□□□□□ -1.35
CRLF3-204ENST00000583527 MCM4P33991 863 aa6.61□□□□□ -1.35
CRLF3-204ENST00000583527 DEKP35659 375 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms