RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 GBA2Q9HCG7 927 aaPredicted RBP22.87■■□□□ 1.25
SNX11-212ENST00000583320 ERBB4Q15303 1308 aa22.86■■□□□ 1.25
SNX11-212ENST00000583320 PSMD14O00487 310 aa22.86■■□□□ 1.25
SNX11-212ENST00000583320 TRPA1O75762 1119 aa22.86■■□□□ 1.25
SNX11-212ENST00000583320 BABAM1Q9NWV8 329 aa22.86■■□□□ 1.25
SNX11-212ENST00000583320 GRAPQ13588 217 aa22.85■■□□□ 1.25
SNX11-212ENST00000583320 GRAPLQ8TC17 118 aaPredicted RBP22.85■■□□□ 1.25
SNX11-212ENST00000583320 AKAP11Q9UKA4 1901 aa22.84■■□□□ 1.25
SNX11-212ENST00000583320 CHL1O00533 1208 aa22.84■■□□□ 1.25
SNX11-212ENST00000583320 ZNF428Q96B54 188 aa22.84■■□□□ 1.25
SNX11-212ENST00000583320 DBNDD1Q9H9R9 158 aa22.84■■□□□ 1.25
SNX11-212ENST00000583320 ZNF157P51786 506 aaPredicted RBP22.83■■□□□ 1.25
SNX11-212ENST00000583320 PRPF38BQ5VTL8 546 aaKnown RBP22.83■■□□□ 1.25
SNX11-212ENST00000583320 NLRP10Q86W26 655 aa22.83■■□□□ 1.25
SNX11-212ENST00000583320 DPF2Q92785 391 aa22.83■■□□□ 1.25
SNX11-212ENST00000583320 KCNQ5Q9NR82 932 aa22.83■■□□□ 1.25
SNX11-212ENST00000583320 RTL9Q8NET4 1388 aa22.83■■□□□ 1.25
SNX11-212ENST00000583320 ASTN2O75129 1339 aaPredicted RBP22.82■■□□□ 1.24
SNX11-212ENST00000583320 DDX60Q8IY21 1712 aaKnown RBP22.82■■□□□ 1.24
SNX11-212ENST00000583320 NEFLP07196 543 aa22.82■■□□□ 1.24
SNX11-212ENST00000583320 SLC10A3P09131 477 aa22.82■■□□□ 1.24
SNX11-212ENST00000583320 DDX46Q7L014 1031 aaKnown RBP22.82■■□□□ 1.24
SNX11-212ENST00000583320 TSR2Q969E8 191 aaKnown RBP22.82■■□□□ 1.24
SNX11-212ENST00000583320 CSRNP1Q96S65 589 aa22.82■■□□□ 1.24
SNX11-212ENST00000583320 RBM26Q5T8P6 1007 aaKnown RBP22.81■■□□□ 1.24
SNX11-212ENST00000583320 C2orf69Q8N8R5 385 aa22.81■■□□□ 1.24
SNX11-212ENST00000583320 CCDC102AQ96A19 550 aa22.81■■□□□ 1.24
SNX11-212ENST00000583320 MBIPQ9NS73 344 aa22.81■■□□□ 1.24
SNX11-212ENST00000583320 SCN9AQ15858 1988 aa22.8■■□□□ 1.24
SNX11-212ENST00000583320 EIF2S2P20042 333 aaKnown RBP22.8■■□□□ 1.24
SNX11-212ENST00000583320 CTU1Q7Z7A3 348 aaKnown RBP22.8■■□□□ 1.24
SNX11-212ENST00000583320 LAS1LQ9Y4W2 734 aaKnown RBP22.8■■□□□ 1.24
SNX11-212ENST00000583320 RIMBP2O15034 1052 aa22.79■■□□□ 1.24
SNX11-212ENST00000583320 EXOSC9Q06265 439 aaKnown RBP22.79■■□□□ 1.24
SNX11-212ENST00000583320 GTF3C3Q9Y5Q9 886 aa22.79■■□□□ 1.24
SNX11-212ENST00000583320 WASHC4Q2M389 1173 aa22.78■■□□□ 1.24
SNX11-212ENST00000583320 DCPSQ96C86 337 aaKnown RBP22.78■■□□□ 1.24
SNX11-212ENST00000583320 GGA3Q9NZ52 723 aa22.78■■□□□ 1.24
SNX11-212ENST00000583320 POLLQ9UGP5 575 aa22.78■■□□□ 1.24
SNX11-212ENST00000583320 TRMT112Q9UI30 125 aaKnown RBP22.78■■□□□ 1.24
SNX11-212ENST00000583320 SH3TC1Q8TE82 1336 aa22.78■■□□□ 1.24
SNX11-212ENST00000583320 RASAL3Q86YV0 1011 aa22.77■■□□□ 1.24
SNX11-212ENST00000583320 CELF1Q92879 486 aaKnown RBP22.77■■□□□ 1.24
SNX11-212ENST00000583320 HPS5Q9UPZ3 1129 aa22.77■■□□□ 1.24
SNX11-212ENST00000583320 ECE2O60344 883 aa22.76■■□□□ 1.23
SNX11-212ENST00000583320 RRP1P56182 461 aaKnown RBP22.76■■□□□ 1.23
SNX11-212ENST00000583320 GPSM2P81274 684 aa22.76■■□□□ 1.23
SNX11-212ENST00000583320 AIMP1Q12904 312 aaKnown RBP22.76■■□□□ 1.23
SNX11-212ENST00000583320 DOK7Q18PE1 504 aa22.76■■□□□ 1.23
SNX11-212ENST00000583320 KIF4BQ2VIQ3 1234 aa22.76■■□□□ 1.23
SNX11-212ENST00000583320 COPS6Q7L5N1 327 aa22.76■■□□□ 1.23
SNX11-212ENST00000583320 XAGE3Q8WTP9 111 aa22.76■■□□□ 1.23
SNX11-212ENST00000583320 NECTIN2Q92692 538 aa22.76■■□□□ 1.23
SNX11-212ENST00000583320 CDCA5Q96FF9 252 aa22.76■■□□□ 1.23
SNX11-212ENST00000583320 TSPYL4Q9UJ04 414 aa22.76■■□□□ 1.23
SNX11-212ENST00000583320 RPS12P25398 132 aaKnown RBP22.75■■□□□ 1.23
SNX11-212ENST00000583320 NSFL1CQ9UNZ2 370 aaKnown RBP22.75■■□□□ 1.23
SNX11-212ENST00000583320 RARSP54136 660 aaKnown RBP22.74■■□□□ 1.23
SNX11-212ENST00000583320 TCIRG1Q13488 830 aa22.74■■□□□ 1.23
SNX11-212ENST00000583320 ERICH6BQ5W0A0 696 aa22.74■■□□□ 1.23
SNX11-212ENST00000583320 TMC4Q7Z404 712 aa22.74■■□□□ 1.23
SNX11-212ENST00000583320 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.74■■□□□ 1.23
SNX11-212ENST00000583320 C6orf229H3BNL8 230 aa22.73■■□□□ 1.23
SNX11-212ENST00000583320 HSP90AB3PQ58FF7 597 aa22.73■■□□□ 1.23
SNX11-212ENST00000583320 ALDH1L2Q3SY69 923 aa22.72■■□□□ 1.23
SNX11-212ENST00000583320 SULF1Q8IWU6 871 aa22.72■■□□□ 1.23
SNX11-212ENST00000583320 PAPPA2Q9BXP8 1791 aa22.71■■□□□ 1.23
SNX11-212ENST00000583320 HTTP42858 3142 aa22.7■■□□□ 1.22
SNX11-212ENST00000583320 VAMP4O75379 141 aa22.7■■□□□ 1.22
SNX11-212ENST00000583320 MOB2Q70IA6 237 aa22.7■■□□□ 1.22
SNX11-212ENST00000583320 VIL1P09327 827 aaKnown RBP22.69■■□□□ 1.22
SNX11-212ENST00000583320 TWISTNBQ3B726 338 aaPredicted RBP22.69■■□□□ 1.22
SNX11-212ENST00000583320 ANGEL2Q5VTE6 544 aaKnown RBP22.69■■□□□ 1.22
SNX11-212ENST00000583320 TBC1D16Q8TBP0 767 aa22.69■■□□□ 1.22
SNX11-212ENST00000583320 ZNF296Q8WUU4 475 aaPredicted RBP22.69■■□□□ 1.22
SNX11-212ENST00000583320 FAM89AQ96GI7 184 aa22.69■■□□□ 1.22
SNX11-212ENST00000583320 SCAF8Q9UPN6 1271 aaKnown RBP22.69■■□□□ 1.22
SNX11-212ENST00000583320 SF3B3Q15393 1217 aaKnown RBP22.68■■□□□ 1.22
SNX11-212ENST00000583320 KRT24Q2M2I5 525 aa22.68■■□□□ 1.22
SNX11-212ENST00000583320 C8orf58Q8NAV2 365 aa22.68■■□□□ 1.22
SNX11-212ENST00000583320 TBC1D8O95759 1140 aa22.67■■□□□ 1.22
SNX11-212ENST00000583320 ZNF280AP59817 542 aaPredicted RBP22.67■■□□□ 1.22
SNX11-212ENST00000583320 PSME4Q14997 1843 aa22.66■■□□□ 1.22
SNX11-212ENST00000583320 SCARF1Q14162 830 aa22.66■■□□□ 1.22
SNX11-212ENST00000583320 TSPYL6Q8N831 410 aa22.66■■□□□ 1.22
SNX11-212ENST00000583320 EYA3Q99504 573 aa22.66■■□□□ 1.22
SNX11-212ENST00000583320 ZNF609O15014 1411 aa22.65■■□□□ 1.22
SNX11-212ENST00000583320 MKI67P46013 3256 aaKnown RBP22.65■■□□□ 1.22
SNX11-212ENST00000583320 ATP5J2-PTCD1G3V325 749 aa22.65■■□□□ 1.22
SNX11-212ENST00000583320 BCAR3O75815 825 aa22.65■■□□□ 1.22
SNX11-212ENST00000583320 RTL5Q5HYW3 569 aaPredicted RBP22.65■■□□□ 1.22
SNX11-212ENST00000583320 ISCA1Q9BUE6 129 aa22.65■■□□□ 1.22
SNX11-212ENST00000583320 REM2Q8IYK8 340 aaPredicted RBP22.64■■□□□ 1.21
SNX11-212ENST00000583320 SSH1Q8WYL5 1049 aa22.64■■□□□ 1.21
SNX11-212ENST00000583320 CHMP4AQ9BY43 222 aa22.64■■□□□ 1.21
SNX11-212ENST00000583320 CHPF2Q9P2E5 772 aa22.64■■□□□ 1.21
SNX11-212ENST00000583320 HDAC9Q9UKV0 1011 aa22.64■■□□□ 1.21
SNX11-212ENST00000583320 UBE2Q2LH0YL09 131 aa22.63■■□□□ 1.21
SNX11-212ENST00000583320 HOXB7P09629 217 aa22.63■■□□□ 1.21
SNX11-212ENST00000583320 PKN2Q16513 984 aaKnown RBP22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms