RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 COL19A1Q14993 1142 aa9.54□□□□□ -0.88
SMARCE1-219ENST00000583294 FAM182BQ5T319 152 aa9.54□□□□□ -0.88
SMARCE1-219ENST00000583294 SLCO4C1Q6ZQN7 724 aa9.54□□□□□ -0.88
SMARCE1-219ENST00000583294 IGFLR1Q9H665 355 aa9.54□□□□□ -0.88
SMARCE1-219ENST00000583294 KLF15Q9UIH9 416 aa9.54□□□□□ -0.88
SMARCE1-219ENST00000583294 IGHA1P01876 353 aa9.53□□□□□ -0.88
SMARCE1-219ENST00000583294 CYP2E1P05181 493 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-219ENST00000583294 POLR3DP05423 398 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-219ENST00000583294 ARAFP10398 606 aa9.53□□□□□ -0.88
SMARCE1-219ENST00000583294 ZNF16P17020 682 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-219ENST00000583294 HOXB4P17483 251 aaPredicted RBP9.53□□□□□ -0.88
SMARCE1-219ENST00000583294 AMPD1P23109 780 aa9.53□□□□□ -0.88
SMARCE1-219ENST00000583294 BTBD6Q96KE9 485 aa9.53□□□□□ -0.88
SMARCE1-219ENST00000583294 ZFYVE28Q9HCC9 887 aa9.53□□□□□ -0.88
SMARCE1-219ENST00000583294 MKL2Q9ULH7 1088 aa9.53□□□□□ -0.88
SMARCE1-219ENST00000583294 RBM47A0AV96 593 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-219ENST00000583294 EREGO14944 169 aa9.52□□□□□ -0.89
SMARCE1-219ENST00000583294 CPNE3O75131 537 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-219ENST00000583294 EPXP11678 715 aa9.52□□□□□ -0.89
SMARCE1-219ENST00000583294 TBC1D8BQ0IIM8 1120 aa9.52□□□□□ -0.89
SMARCE1-219ENST00000583294 NEUROD1Q13562 356 aa9.52□□□□□ -0.89
SMARCE1-219ENST00000583294 ENOX2Q16206 610 aaKnown RBP9.52□□□□□ -0.89
SMARCE1-219ENST00000583294 CHRDQ9H2X0 955 aa9.52□□□□□ -0.89
SMARCE1-219ENST00000583294 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.52□□□□□ -0.89
SMARCE1-219ENST00000583294 CES1P23141 567 aa9.51□□□□□ -0.89
SMARCE1-219ENST00000583294 PCBP4P57723 403 aaKnown RBP9.51□□□□□ -0.89
SMARCE1-219ENST00000583294 ATP2B2Q01814 1243 aa9.51□□□□□ -0.89
SMARCE1-219ENST00000583294 ZNF326Q5BKZ1 582 aaKnown RBP9.51□□□□□ -0.89
SMARCE1-219ENST00000583294 LINC00114Q6XXX2 140 aa9.51□□□□□ -0.89
SMARCE1-219ENST00000583294 SYT9Q86SS6 491 aa9.51□□□□□ -0.89
SMARCE1-219ENST00000583294 KANSL3Q9P2N6 904 aa9.51□□□□□ -0.89
SMARCE1-219ENST00000583294 PSAPP07602 524 aa9.5□□□□□ -0.89
SMARCE1-219ENST00000583294 COL8A1P27658 744 aa9.5□□□□□ -0.89
SMARCE1-219ENST00000583294 NPM2Q86SE8 214 aaKnown RBP9.5□□□□□ -0.89
SMARCE1-219ENST00000583294 OR13H1Q8NG92 308 aa9.5□□□□□ -0.89
SMARCE1-219ENST00000583294 DNAJC25Q9H1X3 360 aa9.5□□□□□ -0.89
SMARCE1-219ENST00000583294 RNF19AQ9NV58 838 aa9.5□□□□□ -0.89
SMARCE1-219ENST00000583294 TLR7Q9NYK1 1049 aaKnown RBP9.5□□□□□ -0.89
SMARCE1-219ENST00000583294 MAP3K6O95382 1288 aa9.49□□□□□ -0.89
SMARCE1-219ENST00000583294 MLLT1Q03111 559 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-219ENST00000583294 ZNF468Q5VIY5 522 aaPredicted RBP9.49□□□□□ -0.89
SMARCE1-219ENST00000583294 DHX32Q7L7V1 743 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-219ENST00000583294 FCHSD1Q86WN1 690 aa9.49□□□□□ -0.89
SMARCE1-219ENST00000583294 DUSP9Q99956 384 aaKnown RBP9.49□□□□□ -0.89
SMARCE1-219ENST00000583294 SUV39H2Q9H5I1 410 aa9.49□□□□□ -0.89
SMARCE1-219ENST00000583294 KRBA1A5PL33 1030 aa9.48□□□□□ -0.89
SMARCE1-219ENST00000583294 MSTNO14793 375 aa9.48□□□□□ -0.89
SMARCE1-219ENST00000583294 ADH6P28332 368 aa9.48□□□□□ -0.89
SMARCE1-219ENST00000583294 PMEPA1Q969W9 287 aa9.48□□□□□ -0.89
SMARCE1-219ENST00000583294 CCDC74AQ96AQ1 378 aa9.48□□□□□ -0.89
SMARCE1-219ENST00000583294 NSUN5Q96P11 429 aaKnown RBP9.48□□□□□ -0.89
SMARCE1-219ENST00000583294 SPOCK3Q9BQ16 436 aa9.48□□□□□ -0.89
SMARCE1-219ENST00000583294 EFCC1Q9HA90 598 aa9.48□□□□□ -0.89
SMARCE1-219ENST00000583294 UNCXA6NJT0 531 aa9.47□□□□□ -0.89
SMARCE1-219ENST00000583294 PRPF40AO75400 957 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-219ENST00000583294 PLAURQ03405 335 aa9.47□□□□□ -0.89
SMARCE1-219ENST00000583294 COL13A1Q5TAT6 717 aaPredicted RBP9.47□□□□□ -0.89
SMARCE1-219ENST00000583294 ALG1LQ6GMV1 187 aa9.47□□□□□ -0.89
SMARCE1-219ENST00000583294 HFE2Q6ZVN8 426 aa9.47□□□□□ -0.89
SMARCE1-219ENST00000583294 EPS8L3Q8TE67 593 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-219ENST00000583294 UBE2OQ9C0C9 1292 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-219ENST00000583294 LOC100996750A0A140TA64 210 aa9.46□□□□□ -0.9
SMARCE1-219ENST00000583294 PI16Q6UXB8 463 aa9.46□□□□□ -0.9
SMARCE1-219ENST00000583294 CHSY3Q70JA7 882 aa9.46□□□□□ -0.9
SMARCE1-219ENST00000583294 FAM161BQ96MY7 647 aa9.46□□□□□ -0.9
SMARCE1-219ENST00000583294 KRTAP4-6Q9BYQ5 205 aa9.46□□□□□ -0.9
SMARCE1-219ENST00000583294 NPHS2Q9NP85 383 aa9.46□□□□□ -0.9
SMARCE1-219ENST00000583294 DNAJB12Q9NXW2 375 aaKnown RBP9.46□□□□□ -0.9
SMARCE1-219ENST00000583294 PARP2Q9UGN5 583 aa9.46□□□□□ -0.9
SMARCE1-219ENST00000583294 ZBTB42B2RXF5 422 aa9.45□□□□□ -0.9
SMARCE1-219ENST00000583294 XPCQ01831 940 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-219ENST00000583294 HYAL2Q12891 473 aa9.45□□□□□ -0.9
SMARCE1-219ENST00000583294 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.45□□□□□ -0.9
SMARCE1-219ENST00000583294 NCAPG2Q86XI2 1143 aa9.45□□□□□ -0.9
SMARCE1-219ENST00000583294 AVENQ9NQS1 362 aaPredicted RBP9.45□□□□□ -0.9
SMARCE1-219ENST00000583294 LATS2Q9NRM7 1088 aa9.45□□□□□ -0.9
SMARCE1-219ENST00000583294 J3QW42 95 aa9.44□□□□□ -0.9
SMARCE1-219ENST00000583294 SIN3BO75182 1162 aa9.44□□□□□ -0.9
SMARCE1-219ENST00000583294 PROCP04070 461 aa9.44□□□□□ -0.9
SMARCE1-219ENST00000583294 DGKGP49619 791 aa9.44□□□□□ -0.9
SMARCE1-219ENST00000583294 FGD1P98174 961 aa9.44□□□□□ -0.9
SMARCE1-219ENST00000583294 GALNT12Q8IXK2 581 aa9.44□□□□□ -0.9
SMARCE1-219ENST00000583294 SALL4Q9UJQ4 1053 aa9.44□□□□□ -0.9
SMARCE1-219ENST00000583294 LOC102724428A0A0B4J2F2 783 aa9.43□□□□□ -0.9
SMARCE1-219ENST00000583294 GADD45BO75293 160 aaPredicted RBP9.43□□□□□ -0.9
SMARCE1-219ENST00000583294 ACPPP15309 386 aa9.43□□□□□ -0.9
SMARCE1-219ENST00000583294 SOX18P35713 384 aa9.43□□□□□ -0.9
SMARCE1-219ENST00000583294 NRLP54845 237 aa9.43□□□□□ -0.9
SMARCE1-219ENST00000583294 SIK1P57059 783 aa9.43□□□□□ -0.9
SMARCE1-219ENST00000583294 FBF1Q8TES7 1133 aa9.43□□□□□ -0.9
SMARCE1-219ENST00000583294 NLRP2Q9NX02 1062 aa9.43□□□□□ -0.9
SMARCE1-219ENST00000583294 GNB5O14775 395 aa9.42□□□□□ -0.9
SMARCE1-219ENST00000583294 EDN3P14138 238 aa9.42□□□□□ -0.9
SMARCE1-219ENST00000583294 GPLD1P80108 840 aa9.42□□□□□ -0.9
SMARCE1-219ENST00000583294 PSMD2Q13200 908 aa9.42□□□□□ -0.9
SMARCE1-219ENST00000583294 TRPM4Q8TD43 1214 aa9.42□□□□□ -0.9
SMARCE1-219ENST00000583294 MRRFQ96E11 262 aaKnown RBP9.42□□□□□ -0.9
SMARCE1-219ENST00000583294 TRPA1O75762 1119 aa9.41□□□□□ -0.9
SMARCE1-219ENST00000583294 CPB1P15086 417 aa9.41□□□□□ -0.9
SMARCE1-219ENST00000583294 ADH7P40394 386 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms