RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 OFD1O75665 1012 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 IQCA1Q86XH1 822 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 DDX54Q8TDD1 881 aaKnown RBP6.8□□□□□ -1.32
RTTN-209ENST00000583043 ZNF274Q96GC6 653 aaPredicted RBP6.8□□□□□ -1.32
RTTN-209ENST00000583043 LRRC27Q9C0I9 530 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 CEMIPQ8WUJ3 1361 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 KIF5BP33176 963 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 PPP1R2P41236 205 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 TRAF1Q13077 416 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 USP48Q86UV5 1035 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 TRMT112Q9UI30 125 aaKnown RBP6.8□□□□□ -1.32
RTTN-209ENST00000583043 WDR19Q8NEZ3 1342 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 NCKAP5LQ9HCH0 1330 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 SYT1P21579 422 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 TPRNQ4KMQ1 711 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 LDHAL6AQ6ZMR3 332 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 SIRT2Q8IXJ6 389 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 NYXQ9GZU5 481 aa6.8□□□□□ -1.32
RTTN-209ENST00000583043 PNMA6EA0A0J9YXQ4 647 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 TDO2P48775 406 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 SPAG1Q07617 926 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 SSRP1Q08945 709 aaKnown RBP6.79□□□□□ -1.32
RTTN-209ENST00000583043 MNS1Q8NEH6 495 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 MRPS27Q92552 414 aaKnown RBP6.79□□□□□ -1.32
RTTN-209ENST00000583043 MAP4K1Q92918 833 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 STRN4Q9NRL3 753 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 APPBP2Q92624 585 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 CARD10Q9BWT7 1032 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 BICC1Q9H694 974 aaKnown RBP6.79□□□□□ -1.32
RTTN-209ENST00000583043 SLC12A7Q9Y666 1083 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 G3V3G9 751 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 IARSP41252 1262 aaKnown RBP6.79□□□□□ -1.32
RTTN-209ENST00000583043 KRT24Q2M2I5 525 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 DCAF8Q5TAQ9 597 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 SRRTQ9BXP5 876 aaKnown RBP6.79□□□□□ -1.32
RTTN-209ENST00000583043 R3HCC1Q9Y3T6 440 aaKnown RBP6.79□□□□□ -1.32
RTTN-209ENST00000583043 MROH5Q6ZUA9 1318 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 A0A0U1RQG5 324 aaPredicted RBP6.79□□□□□ -1.32
RTTN-209ENST00000583043 POTEB2H3BUK9 544 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 SLC27A2O14975 620 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 MAP4K4O95819 1239 aaPredicted RBP6.79□□□□□ -1.32
RTTN-209ENST00000583043 TSGA10IPQ3SY00 556 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 HOMER1Q86YM7 354 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 PDCL3Q9H2J4 239 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 CFAP65Q6ZU64 1925 aaKnown RBP6.79□□□□□ -1.32
RTTN-209ENST00000583043 KIF20AO95235 890 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 PCCAP05165 728 aaPredicted RBP6.79□□□□□ -1.32
RTTN-209ENST00000583043 TUBBP07437 444 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 HAUS7Q99871 368 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 ANKRD2Q9GZV1 360 aa6.79□□□□□ -1.32
RTTN-209ENST00000583043 GOLIM4O00461 696 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 NFATC2IPQ8NCF5 419 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 SH3TC1Q8TE82 1336 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 MARCH6O60337 910 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 YEATS4O95619 227 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 SFPQP23246 707 aaKnown RBP eCLIP6.78□□□□□ -1.32
RTTN-209ENST00000583043 IQCEQ6IPM2 695 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 CTCFLQ8NI51 663 aaPredicted RBP6.78□□□□□ -1.32
RTTN-209ENST00000583043 LSG1Q9H089 658 aaKnown RBP6.78□□□□□ -1.32
RTTN-209ENST00000583043 LRP2BPQ9P2M1 347 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 GOLGA8BA8MQT2 603 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 FGFR1OPO95684 399 aaKnown RBP6.78□□□□□ -1.32
RTTN-209ENST00000583043 ZNF165P49910 485 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 CT47A1Q5JQC4 288 aaPredicted RBP6.78□□□□□ -1.32
RTTN-209ENST00000583043 SYTL4Q96C24 671 aaPredicted RBP6.78□□□□□ -1.32
RTTN-209ENST00000583043 CTAGE1Q96RT6 745 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 RBM28Q9NW13 759 aaKnown RBP6.78□□□□□ -1.32
RTTN-209ENST00000583043 ZNHIT6Q9NWK9 470 aaKnown RBP6.78□□□□□ -1.32
RTTN-209ENST00000583043 ORC3Q9UBD5 711 aaPredicted RBP6.78□□□□□ -1.32
RTTN-209ENST00000583043 IQSEC3Q9UPP2 1182 aaPredicted RBP6.78□□□□□ -1.32
RTTN-209ENST00000583043 MCM3P25205 808 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 ESR2Q92731 530 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 GBP3Q9H0R5 595 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 RMND1Q9NWS8 449 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 USP16Q9Y5T5 823 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 WDR17Q8IZU2 1322 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 GOLGA8AA7E2F4 631 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 TUBB2AQ13885 445 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 CCDC102BQ68D86 513 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 CATIPQ7Z7H3 387 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 PPFIBP1Q86W92 1011 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 IL17RAQ96F46 866 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 SUCLG2Q96I99 432 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 TUBB2BQ9BVA1 445 aa6.78□□□□□ -1.32
RTTN-209ENST00000583043 MAGEC2Q9UBF1 373 aaPredicted RBP6.78□□□□□ -1.32
RTTN-209ENST00000583043 ZNF500O60304 480 aaPredicted RBP6.77□□□□□ -1.32
RTTN-209ENST00000583043 PDE8AO60658 829 aa6.77□□□□□ -1.32
RTTN-209ENST00000583043 NBPF7P0C2Y1 421 aaPredicted RBP6.77□□□□□ -1.32
RTTN-209ENST00000583043 METAP2P50579 478 aaKnown RBP eCLIP6.77□□□□□ -1.32
RTTN-209ENST00000583043 RCAN1P53805 252 aa6.77□□□□□ -1.32
RTTN-209ENST00000583043 TCIRG1Q13488 830 aa6.77□□□□□ -1.32
RTTN-209ENST00000583043 MFSD6Q6ZSS7 791 aa6.77□□□□□ -1.32
RTTN-209ENST00000583043 BRF1Q92994 677 aa6.77□□□□□ -1.32
RTTN-209ENST00000583043 RAB34Q9BZG1 259 aa6.77□□□□□ -1.32
RTTN-209ENST00000583043 CLSTN2Q9H4D0 955 aa6.77□□□□□ -1.32
RTTN-209ENST00000583043 UTYO14607 1347 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 SHPRHQ149N8 1683 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 IDH1O75874 414 aaKnown RBP6.77□□□□□ -1.33
RTTN-209ENST00000583043 FAM160A1Q05DH4 1040 aa6.77□□□□□ -1.33
RTTN-209ENST00000583043 PDE4BQ07343 736 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms