RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 LAMB2P55268 1798 aa7.56□□□□□ -1.2
PPP4R1-223ENST00000582933 PTPRCP08575 1304 aa7.55□□□□□ -1.2
PPP4R1-223ENST00000582933 IGKV5-2P06315 115 aa7.55□□□□□ -1.2
PPP4R1-223ENST00000582933 PRPF40BQ6NWY9 871 aaKnown RBP7.55□□□□□ -1.2
PPP4R1-223ENST00000582933 C3orf67Q6ZVT6 689 aa7.55□□□□□ -1.2
PPP4R1-223ENST00000582933 FAM177A1Q8N128 213 aaPredicted RBP7.55□□□□□ -1.2
PPP4R1-223ENST00000582933 TTLL6Q8N841 843 aa7.55□□□□□ -1.2
PPP4R1-223ENST00000582933 DNAAF4Q8WXU2 420 aa7.55□□□□□ -1.2
PPP4R1-223ENST00000582933 MASTLQ96GX5 879 aa7.55□□□□□ -1.2
PPP4R1-223ENST00000582933 MYD88Q99836 296 aa7.55□□□□□ -1.2
PPP4R1-223ENST00000582933 SMC4Q9NTJ3 1288 aa7.55□□□□□ -1.2
PPP4R1-223ENST00000582933 CWC25Q9NXE8 425 aaPredicted RBP7.55□□□□□ -1.2
PPP4R1-223ENST00000582933 KIF16BQ96L93 1317 aa7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 NEURL1BA8MQ27 555 aa7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 PCCAP05165 728 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 HOXA10P31260 410 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 BRPF1P55201 1214 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 CWF19L2Q2TBE0 894 aaKnown RBP7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 SLC10A5Q5PT55 438 aa7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 SYNE4Q8N205 404 aa7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 MRPL50Q8N5N7 158 aaKnown RBP7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 ZBTB38Q8NAP3 1195 aaPredicted RBP7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 LINS1Q8NG48 757 aa7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 RPGRQ92834 1020 aaKnown RBP7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 CNKSR1Q969H4 720 aa7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 BCL2L13Q9BXK5 485 aa7.54□□□□□ -1.2
PPP4R1-223ENST00000582933 CDHR2Q9BYE9 1310 aa7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 SNED1Q8TER0 1413 aa7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 DDX60Q8IY21 1712 aaKnown RBP7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 ARFGEF1Q9Y6D6 1849 aa7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 F6X3S4 739 aa7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 IRS4O14654 1257 aaPredicted RBP7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 TPM2P07951 284 aa7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 PRKAR2AP13861 404 aaKnown RBP7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 HCLS1P14317 486 aaPredicted RBP7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 RARSP54136 660 aaKnown RBP7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 BEND3Q5T5X7 828 aa7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 SOGA3Q5TF21 947 aa7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 FAM89AQ96GI7 184 aa7.53□□□□□ -1.2
PPP4R1-223ENST00000582933 LTBP3Q9NS15 1303 aa7.52□□□□□ -1.2
PPP4R1-223ENST00000582933 RTL9Q8NET4 1388 aa7.52□□□□□ -1.21
PPP4R1-223ENST00000582933 CTSWP56202 376 aa7.52□□□□□ -1.21
PPP4R1-223ENST00000582933 GCKRQ14397 625 aa7.52□□□□□ -1.21
PPP4R1-223ENST00000582933 CASC1Q6TDU7 716 aa7.52□□□□□ -1.21
PPP4R1-223ENST00000582933 UBE3BQ7Z3V4 1068 aa7.52□□□□□ -1.21
PPP4R1-223ENST00000582933 C7orf43Q8WVR3 580 aa7.52□□□□□ -1.21
PPP4R1-223ENST00000582933 NLRP3Q96P20 1036 aa7.52□□□□□ -1.21
PPP4R1-223ENST00000582933 CRAMP1Q96RY5 1269 aa7.52□□□□□ -1.21
PPP4R1-223ENST00000582933 YY1AP1Q9H869 796 aa7.52□□□□□ -1.21
PPP4R1-223ENST00000582933 ABCC4O15439 1325 aa7.52□□□□□ -1.21
PPP4R1-223ENST00000582933 NFKBIEO00221 500 aa7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 PPEF1O14829 653 aaPredicted RBP7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 ALDH1L1O75891 902 aa7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 ALDH1B1P30837 517 aa7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 CASP7P55210 303 aa7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 SLC20A2Q08357 652 aa7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 SF3B3Q15393 1217 aaKnown RBP7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 CCDC93Q567U6 631 aa7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 EXOC8Q8IYI6 725 aa7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 RBM17Q96I25 401 aaKnown RBP7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 ZBTB47Q9UFB7 747 aaPredicted RBP7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 CACNA1FO60840 1977 aa7.51□□□□□ -1.21
PPP4R1-223ENST00000582933 LRRC37AA6NMS7 1700 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 H7C1W4 665 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 GRM8O00222 908 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 C21orf2O43822 256 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 PDE8AO60658 829 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 ECM2O94769 699 aaPredicted RBP7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 KIF20AO95235 890 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 RASSF7Q02833 373 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 GRAPQ13588 217 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 CCDC152Q4G0S7 254 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 SLC4A10Q6U841 1118 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 ARHGAP27Q6ZUM4 889 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 DDX46Q7L014 1031 aaKnown RBP7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 EGFL6Q8IUX8 553 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 TMTC2Q8N394 836 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 GRAPLQ8TC17 118 aaPredicted RBP7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 ARHGAP45Q92619 1136 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 PLA2G12BQ9BX93 195 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 API5Q9BZZ5 524 aaKnown RBP7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 SRCIN1Q9C0H9 1055 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 TAOK3Q9H2K8 898 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 COL4A1P02462 1669 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 DUOX1Q9NRD9 1551 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 UTYO14607 1347 aa7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 ZC3H4Q9UPT8 1303 aaKnown RBP7.5□□□□□ -1.21
PPP4R1-223ENST00000582933 LMNB1P20700 586 aa7.49□□□□□ -1.21
PPP4R1-223ENST00000582933 YY1P25490 414 aa7.49□□□□□ -1.21
PPP4R1-223ENST00000582933 CCT4P50991 539 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-223ENST00000582933 PPP4R3BQ5MIZ7 849 aa7.49□□□□□ -1.21
PPP4R1-223ENST00000582933 TMC4Q7Z404 712 aa7.49□□□□□ -1.21
PPP4R1-223ENST00000582933 SLC51AQ86UW1 340 aa7.49□□□□□ -1.21
PPP4R1-223ENST00000582933 JARID2Q92833 1246 aaPredicted RBP7.49□□□□□ -1.21
PPP4R1-223ENST00000582933 NOB1Q9ULX3 412 aaKnown RBP7.49□□□□□ -1.21
PPP4R1-223ENST00000582933 SH3BP1Q9Y3L3 701 aa7.49□□□□□ -1.21
PPP4R1-223ENST00000582933 ATP6V0A2Q9Y487 856 aa7.49□□□□□ -1.21
PPP4R1-223ENST00000582933 SLX4Q8IY92 1834 aa7.49□□□□□ -1.21
PPP4R1-223ENST00000582933 GOLGA6L3A6NEY3 463 aa7.48□□□□□ -1.21
PPP4R1-223ENST00000582933 IPO8O15397 1037 aaKnown RBP7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms