RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 ZBED2Q9BTP6 218 aa9.78□□□□□ -0.84
NF1-222ENST00000582892 SLC52A2Q9HAB3 445 aa9.78□□□□□ -0.84
NF1-222ENST00000582892 IARSP41252 1262 aaKnown RBP9.77□□□□□ -0.85
NF1-222ENST00000582892 TSR1Q2NL82 804 aaKnown RBP9.77□□□□□ -0.85
NF1-222ENST00000582892 DMRTA1Q5VZB9 504 aa9.77□□□□□ -0.85
NF1-222ENST00000582892 GPC2Q8N158 579 aa9.77□□□□□ -0.85
NF1-222ENST00000582892 GLIS2Q9BZE0 524 aaPredicted RBP9.77□□□□□ -0.85
NF1-222ENST00000582892 NBPF3Q9H094 633 aa9.77□□□□□ -0.85
NF1-222ENST00000582892 MRS2Q9HD23 443 aa9.77□□□□□ -0.85
NF1-222ENST00000582892 RANBP2P49792 3224 aaKnown RBP9.77□□□□□ -0.85
NF1-222ENST00000582892 AKAP11Q9UKA4 1901 aa9.76□□□□□ -0.85
NF1-222ENST00000582892 CELF2O95319 508 aaKnown RBP9.76□□□□□ -0.85
NF1-222ENST00000582892 PIP4K2AP48426 406 aaPredicted RBP9.76□□□□□ -0.85
NF1-222ENST00000582892 BRPF1P55201 1214 aaPredicted RBP9.76□□□□□ -0.85
NF1-222ENST00000582892 AMOTQ4VCS5 1084 aa9.76□□□□□ -0.85
NF1-222ENST00000582892 SYNE4Q8N205 404 aa9.76□□□□□ -0.85
NF1-222ENST00000582892 RBM27Q9P2N5 1060 aaKnown RBP9.76□□□□□ -0.85
NF1-222ENST00000582892 VPS9D1Q9Y2B5 631 aa9.76□□□□□ -0.85
NF1-222ENST00000582892 TRIOBPQ9H2D6 2365 aa9.76□□□□□ -0.85
NF1-222ENST00000582892 SIPA1L3O60292 1781 aaPredicted RBP9.75□□□□□ -0.85
NF1-222ENST00000582892 POLR2AP24928 1970 aaKnown RBP9.75□□□□□ -0.85
NF1-222ENST00000582892 COL6A3P12111 3177 aa9.75□□□□□ -0.85
NF1-222ENST00000582892 CAMTA2O94983 1202 aa9.75□□□□□ -0.85
NF1-222ENST00000582892 SOGA3Q5TF21 947 aa9.75□□□□□ -0.85
NF1-222ENST00000582892 ZNF408Q9H9D4 720 aa9.75□□□□□ -0.85
NF1-222ENST00000582892 PDZRN3Q9UPQ7 1066 aa9.75□□□□□ -0.85
NF1-222ENST00000582892 NPHP1O15259 732 aa9.74□□□□□ -0.85
NF1-222ENST00000582892 RNMTO43148 476 aaKnown RBP9.74□□□□□ -0.85
NF1-222ENST00000582892 CA12O43570 354 aa9.74□□□□□ -0.85
NF1-222ENST00000582892 A1BGP04217 495 aa9.74□□□□□ -0.85
NF1-222ENST00000582892 COL9A1P20849 921 aa9.74□□□□□ -0.85
NF1-222ENST00000582892 ST5P78524 1137 aa9.74□□□□□ -0.85
NF1-222ENST00000582892 RALBP1Q15311 655 aa9.74□□□□□ -0.85
NF1-222ENST00000582892 HABP4Q5JVS0 413 aaKnown RBP9.74□□□□□ -0.85
NF1-222ENST00000582892 SULT6B1Q6IMI4 303 aa9.74□□□□□ -0.85
NF1-222ENST00000582892 PACS2Q86VP3 889 aa9.74□□□□□ -0.85
NF1-222ENST00000582892 RABGEF1Q9UJ41 708 aa9.74□□□□□ -0.85
NF1-222ENST00000582892 FAM177BA6PVY3 158 aa9.73□□□□□ -0.85
NF1-222ENST00000582892 TRIM6-TRIM34B2RNG4 842 aa9.73□□□□□ -0.85
NF1-222ENST00000582892 LMOD1P29536 600 aaPredicted RBP9.73□□□□□ -0.85
NF1-222ENST00000582892 PRSS12P56730 875 aa9.73□□□□□ -0.85
NF1-222ENST00000582892 SETDB2Q96T68 719 aa9.73□□□□□ -0.85
NF1-222ENST00000582892 SHTN1A0MZ66 631 aa9.72□□□□□ -0.85
NF1-222ENST00000582892 NPR1P16066 1061 aa9.72□□□□□ -0.85
NF1-222ENST00000582892 CCDC184Q52MB2 194 aa9.72□□□□□ -0.85
NF1-222ENST00000582892 AKAP4Q5JQC9 854 aa9.72□□□□□ -0.85
NF1-222ENST00000582892 CDCA7LQ96GN5 454 aa9.72□□□□□ -0.85
NF1-222ENST00000582892 ZNF496Q96IT1 587 aaPredicted RBP9.72□□□□□ -0.85
NF1-222ENST00000582892 A0A087WZG4 1122 aa9.71□□□□□ -0.86
NF1-222ENST00000582892 TRPA1O75762 1119 aa9.71□□□□□ -0.86
NF1-222ENST00000582892 HIRAP54198 1017 aaPredicted RBP9.71□□□□□ -0.86
NF1-222ENST00000582892 EIF6P56537 245 aaKnown RBP9.71□□□□□ -0.86
NF1-222ENST00000582892 RBM26Q5T8P6 1007 aaKnown RBP9.71□□□□□ -0.86
NF1-222ENST00000582892 USP50Q70EL3 339 aaPredicted RBP9.71□□□□□ -0.86
NF1-222ENST00000582892 NBPF5PQ86XG9 351 aaPredicted RBP9.71□□□□□ -0.86
NF1-222ENST00000582892 GPIHBP1Q8IV16 184 aa9.71□□□□□ -0.86
NF1-222ENST00000582892 RTKN2Q8IZC4 609 aa9.71□□□□□ -0.86
NF1-222ENST00000582892 CDHR5Q9HBB8 845 aa9.71□□□□□ -0.86
NF1-222ENST00000582892 HPS5Q9UPZ3 1129 aa9.71□□□□□ -0.86
NF1-222ENST00000582892 KLRG2A4D1S0 409 aaPredicted RBP9.7□□□□□ -0.86
NF1-222ENST00000582892 FAM155AB1AL88 458 aaPredicted RBP9.7□□□□□ -0.86
NF1-222ENST00000582892 HRO43593 1189 aa9.7□□□□□ -0.86
NF1-222ENST00000582892 STARD3NLO95772 234 aa9.7□□□□□ -0.86
NF1-222ENST00000582892 PTGDRQ13258 359 aa9.7□□□□□ -0.86
NF1-222ENST00000582892 HIC1Q14526 733 aa9.7□□□□□ -0.86
NF1-222ENST00000582892 MRPL50Q8N5N7 158 aaKnown RBP9.7□□□□□ -0.86
NF1-222ENST00000582892 TRPM4Q8TD43 1214 aa9.7□□□□□ -0.86
NF1-222ENST00000582892 JDP2Q8WYK2 163 aa9.7□□□□□ -0.86
NF1-222ENST00000582892 PPP4R2Q9NY27 417 aa9.7□□□□□ -0.86
NF1-222ENST00000582892 MYBBP1AQ9BQG0 1328 aaKnown RBP9.7□□□□□ -0.86
NF1-222ENST00000582892 ABCC12Q96J65 1359 aa9.7□□□□□ -0.86
NF1-222ENST00000582892 KIAA0100Q14667 2235 aaKnown RBP9.7□□□□□ -0.86
NF1-222ENST00000582892 GOLGA8CPA6NN73 597 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 NBPF26B4DH59 902 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 TCERG1O14776 1098 aaKnown RBP9.69□□□□□ -0.86
NF1-222ENST00000582892 FXR1P51114 621 aaKnown RBP eCLIP9.69□□□□□ -0.86
NF1-222ENST00000582892 HUNKP57058 714 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 NOGQ13253 232 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 PROX2Q3B8N5 592 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 LAPTM4BQ86VI4 370 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 DZIP3Q86Y13 1208 aaKnown RBP9.69□□□□□ -0.86
NF1-222ENST00000582892 LARGE2Q8N3Y3 721 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 HHIPL1Q96JK4 782 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 PSMD1Q99460 953 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 RNF186Q9NXI6 227 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 GPRC5DQ9NZD1 345 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 HEG1Q9ULI3 1381 aa9.69□□□□□ -0.86
NF1-222ENST00000582892 PRAMEF22A3QJZ6 481 aa9.68□□□□□ -0.86
NF1-222ENST00000582892 KCNQ3O43525 872 aa9.68□□□□□ -0.86
NF1-222ENST00000582892 HMOX1P09601 288 aa9.68□□□□□ -0.86
NF1-222ENST00000582892 IL6STP40189 918 aaPredicted RBP9.68□□□□□ -0.86
NF1-222ENST00000582892 GMPSP49915 693 aaPredicted RBP9.68□□□□□ -0.86
NF1-222ENST00000582892 KIF23Q02241 960 aaPredicted RBP9.68□□□□□ -0.86
NF1-222ENST00000582892 MTHFSDQ2M296 383 aaKnown RBP9.68□□□□□ -0.86
NF1-222ENST00000582892 CTU1Q7Z7A3 348 aaKnown RBP9.68□□□□□ -0.86
NF1-222ENST00000582892 FAM9BQ8IZU0 186 aa9.68□□□□□ -0.86
NF1-222ENST00000582892 PNISRQ8TF01 805 aaKnown RBP9.68□□□□□ -0.86
NF1-222ENST00000582892 NPDC1Q9NQX5 325 aaPredicted RBP9.68□□□□□ -0.86
NF1-222ENST00000582892 ADARB2Q9NS39 739 aaKnown RBP9.68□□□□□ -0.86
NF1-222ENST00000582892 KIAA1468Q9P260 1216 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms