RNA–Protein interactions for RNA: ENST00000581790.5

NF1-221, Transcript of neurofibromin 1, humanhuman

TSL 2

Gene NF1, Length 1,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-221ENST00000581790 ABTB2Q8N961 1025 aa8.32□□□□□ -1.08
NF1-221ENST00000581790 GPKOWQ92917 476 aaPredicted RBP eCLIP8.32□□□□□ -1.08
NF1-221ENST00000581790 ZNF837Q96EG3 531 aaPredicted RBP8.32□□□□□ -1.08
NF1-221ENST00000581790 KCTD15Q96SI1 283 aaPredicted RBP8.32□□□□□ -1.08
NF1-221ENST00000581790 ZNF395Q9H8N7 513 aaPredicted RBP8.32□□□□□ -1.08
NF1-221ENST00000581790 RBM19Q9Y4C8 960 aaKnown RBP8.32□□□□□ -1.08
NF1-221ENST00000581790 ALS2Q96Q42 1657 aa8.32□□□□□ -1.08
NF1-221ENST00000581790 STRCQ7RTU9 1775 aa8.32□□□□□ -1.08
NF1-221ENST00000581790 RTL1A6NKG5 1358 aa8.32□□□□□ -1.08
NF1-221ENST00000581790 MAP3K19Q56UN5 1328 aa8.31□□□□□ -1.08
NF1-221ENST00000581790 GNAI1P63096 354 aa8.31□□□□□ -1.08
NF1-221ENST00000581790 EXOSC9Q06265 439 aaKnown RBP8.31□□□□□ -1.08
NF1-221ENST00000581790 CSPP1Q1MSJ5 1256 aa8.31□□□□□ -1.08
NF1-221ENST00000581790 SULT6B1Q6IMI4 303 aa8.31□□□□□ -1.08
NF1-221ENST00000581790 CENPQQ7L2Z9 268 aaPredicted RBP8.31□□□□□ -1.08
NF1-221ENST00000581790 RIC3Q7Z5B4 369 aa8.31□□□□□ -1.08
NF1-221ENST00000581790 FRAT1Q92837 279 aaPredicted RBP8.31□□□□□ -1.08
NF1-221ENST00000581790 TSR2Q969E8 191 aaKnown RBP8.31□□□□□ -1.08
NF1-221ENST00000581790 PHACTR3Q96KR7 559 aa8.31□□□□□ -1.08
NF1-221ENST00000581790 NFAT5O94916 1531 aa8.3□□□□□ -1.08
NF1-221ENST00000581790 LRRC37A3O60309 1634 aa8.3□□□□□ -1.08
NF1-221ENST00000581790 TCERG1O14776 1098 aaKnown RBP8.3□□□□□ -1.08
NF1-221ENST00000581790 PSME1Q06323 249 aa8.3□□□□□ -1.08
NF1-221ENST00000581790 HSP90AB2PQ58FF8 381 aa8.3□□□□□ -1.08
NF1-221ENST00000581790 ESCO1Q5FWF5 840 aa8.3□□□□□ -1.08
NF1-221ENST00000581790 ZKSCAN2Q63HK3 967 aa8.3□□□□□ -1.08
NF1-221ENST00000581790 PROSER2Q86WR7 435 aaPredicted RBP8.3□□□□□ -1.08
NF1-221ENST00000581790 ZNF428Q96B54 188 aa8.3□□□□□ -1.08
NF1-221ENST00000581790 SLC10A4Q96EP9 437 aa8.3□□□□□ -1.08
NF1-221ENST00000581790 IFT57Q9NWB7 429 aa8.3□□□□□ -1.08
NF1-221ENST00000581790 FAM208AQ9UK61 1670 aaKnown RBP8.3□□□□□ -1.08
NF1-221ENST00000581790 KIF16BQ96L93 1317 aa8.29□□□□□ -1.08
NF1-221ENST00000581790 DCCP43146 1447 aa8.29□□□□□ -1.08
NF1-221ENST00000581790 NCOA3Q9Y6Q9 1424 aa8.29□□□□□ -1.08
NF1-221ENST00000581790 SLIT3O75094 1523 aa8.29□□□□□ -1.08
NF1-221ENST00000581790 GPR25O00155 361 aa8.29□□□□□ -1.08
NF1-221ENST00000581790 ALDH1L2Q3SY69 923 aa8.29□□□□□ -1.08
NF1-221ENST00000581790 INTS6LQ5JSJ4 861 aaKnown RBP8.29□□□□□ -1.08
NF1-221ENST00000581790 ACDQ96AP0 544 aa8.29□□□□□ -1.08
NF1-221ENST00000581790 SMC4Q9NTJ3 1288 aa8.29□□□□□ -1.08
NF1-221ENST00000581790 CDV3Q9UKY7 258 aaKnown RBP8.29□□□□□ -1.08
NF1-221ENST00000581790 LAS1LQ9Y4W2 734 aaKnown RBP8.29□□□□□ -1.08
NF1-221ENST00000581790 LMO7Q8WWI1 1683 aa8.29□□□□□ -1.08
NF1-221ENST00000581790 CRYBG1Q9Y4K1 1723 aa8.29□□□□□ -1.08
NF1-221ENST00000581790 KDM2BQ8NHM5 1336 aa8.29□□□□□ -1.08
NF1-221ENST00000581790 CAMTA1Q9Y6Y1 1673 aa8.28□□□□□ -1.08
NF1-221ENST00000581790 KDRP35968 1356 aa8.28□□□□□ -1.08
NF1-221ENST00000581790 IPO8O15397 1037 aaKnown RBP8.28□□□□□ -1.08
NF1-221ENST00000581790 FTSJ3Q8IY81 847 aaKnown RBP8.28□□□□□ -1.08
NF1-221ENST00000581790 KCNH5Q8NCM2 988 aa8.28□□□□□ -1.08
NF1-221ENST00000581790 CLUAP1Q96AJ1 413 aa8.28□□□□□ -1.08
NF1-221ENST00000581790 BCL2L13Q9BXK5 485 aa8.28□□□□□ -1.08
NF1-221ENST00000581790 COG6Q9Y2V7 657 aa8.28□□□□□ -1.08
NF1-221ENST00000581790 IGSF1Q8N6C5 1336 aa8.28□□□□□ -1.08
NF1-221ENST00000581790 N4BP2Q86UW6 1770 aaPredicted RBP8.27□□□□□ -1.08
NF1-221ENST00000581790 C1orf167Q5SNV9 1468 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 KRBA1A5PL33 1030 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 HOXC9P31274 260 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 HAP1P54257 671 aaPredicted RBP8.27□□□□□ -1.09
NF1-221ENST00000581790 QPCTQ16769 361 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 NUTM2GQ5VZR2 741 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 LYSMD3Q7Z3D4 306 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 KRTAP1-3Q8IUG1 177 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 AEBP1Q8IUX7 1158 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 TRIM22Q8IYM9 498 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 DZIP1LQ8IYY4 767 aaKnown RBP8.27□□□□□ -1.09
NF1-221ENST00000581790 GAS2L2Q8NHY3 880 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 PANK1Q8TE04 598 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 C19orf44Q9H6X5 657 aa8.27□□□□□ -1.09
NF1-221ENST00000581790 KDM3BQ7LBC6 1761 aa8.26□□□□□ -1.09
NF1-221ENST00000581790 ADH1AP07327 375 aa8.26□□□□□ -1.09
NF1-221ENST00000581790 FURINP09958 794 aa8.26□□□□□ -1.09
NF1-221ENST00000581790 ZNF853P0CG23 659 aa8.26□□□□□ -1.09
NF1-221ENST00000581790 ATF3P18847 181 aa8.26□□□□□ -1.09
NF1-221ENST00000581790 MVPQ14764 893 aaKnown RBP8.26□□□□□ -1.09
NF1-221ENST00000581790 HELBQ8NG08 1087 aaPredicted RBP8.26□□□□□ -1.09
NF1-221ENST00000581790 SSH1Q8WYL5 1049 aa8.26□□□□□ -1.09
NF1-221ENST00000581790 RTF1Q92541 710 aaKnown RBP8.26□□□□□ -1.09
NF1-221ENST00000581790 GMCL1Q96IK5 515 aa8.26□□□□□ -1.09
NF1-221ENST00000581790 ARHGAP9Q9BRR9 750 aa8.26□□□□□ -1.09
NF1-221ENST00000581790 LRRC4BQ9NT99 713 aa8.26□□□□□ -1.09
NF1-221ENST00000581790 NUTM2BA6NNL0 878 aaPredicted RBP8.25□□□□□ -1.09
NF1-221ENST00000581790 NUTM2EB1AL46 878 aaPredicted RBP8.25□□□□□ -1.09
NF1-221ENST00000581790 BRPF1P55201 1214 aaPredicted RBP8.25□□□□□ -1.09
NF1-221ENST00000581790 FOXR1Q6PIV2 292 aa8.25□□□□□ -1.09
NF1-221ENST00000581790 ATF7IPQ6VMQ6 1270 aa8.25□□□□□ -1.09
NF1-221ENST00000581790 NUTM2AQ8IVF1 878 aaPredicted RBP8.25□□□□□ -1.09
NF1-221ENST00000581790 THUMPD2Q9BTF0 503 aaKnown RBP8.25□□□□□ -1.09
NF1-221ENST00000581790 CHMP4BQ9H444 224 aaKnown RBP8.25□□□□□ -1.09
NF1-221ENST00000581790 LIMD1Q9UGP4 676 aa8.25□□□□□ -1.09
NF1-221ENST00000581790 DDX19BQ9UMR2 479 aa8.25□□□□□ -1.09
NF1-221ENST00000581790 MST1RQ04912 1400 aa8.25□□□□□ -1.09
NF1-221ENST00000581790 SIPA1L3O60292 1781 aaPredicted RBP8.25□□□□□ -1.09
NF1-221ENST00000581790 SCN11AQ9UI33 1791 aa8.25□□□□□ -1.09
NF1-221ENST00000581790 TMEM94Q12767 1356 aa8.24□□□□□ -1.09
NF1-221ENST00000581790 FAM83GA6ND36 823 aa8.24□□□□□ -1.09
NF1-221ENST00000581790 HTATSF1O43719 755 aaKnown RBP8.24□□□□□ -1.09
NF1-221ENST00000581790 VAMP4O75379 141 aa8.24□□□□□ -1.09
NF1-221ENST00000581790 TWISTNBQ3B726 338 aaPredicted RBP8.24□□□□□ -1.09
NF1-221ENST00000581790 KRT28Q7Z3Y7 464 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms