RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 H7C1D1 291 aa25.5■■□□□ 1.67
SMG8-204ENST00000580498 ALDH1L1O75891 902 aa25.5■■□□□ 1.67
SMG8-204ENST00000580498 GMPSP49915 693 aaPredicted RBP25.5■■□□□ 1.67
SMG8-204ENST00000580498 DBNDD1Q9H9R9 158 aa25.5■■□□□ 1.67
SMG8-204ENST00000580498 DUOX1Q9NRD9 1551 aa25.5■■□□□ 1.67
SMG8-204ENST00000580498 CREBZFQ9NS37 354 aa25.5■■□□□ 1.67
SMG8-204ENST00000580498 ECE2O60344 883 aa25.49■■□□□ 1.67
SMG8-204ENST00000580498 EPS15P42566 896 aa25.49■■□□□ 1.67
SMG8-204ENST00000580498 SLFN5Q08AF3 891 aa25.49■■□□□ 1.67
SMG8-204ENST00000580498 BEND3Q5T5X7 828 aa25.49■■□□□ 1.67
SMG8-204ENST00000580498 CNTROBQ8N137 903 aa25.49■■□□□ 1.67
SMG8-204ENST00000580498 SRCIN1Q9C0H9 1055 aa25.49■■□□□ 1.67
SMG8-204ENST00000580498 CHMP3Q9Y3E7 222 aa25.49■■□□□ 1.67
SMG8-204ENST00000580498 PTPRCP08575 1304 aa25.48■■□□□ 1.67
SMG8-204ENST00000580498 ANKRD18BA2A2Z9 1011 aa25.48■■□□□ 1.67
SMG8-204ENST00000580498 ITGA6P23229 1130 aa25.48■■□□□ 1.67
SMG8-204ENST00000580498 HTRA3P83110 453 aa25.48■■□□□ 1.67
SMG8-204ENST00000580498 DNAJC5GQ8N7S2 189 aa25.48■■□□□ 1.67
SMG8-204ENST00000580498 CEP350Q5VT06 3117 aa25.48■■□□□ 1.67
SMG8-204ENST00000580498 GRM8O00222 908 aa25.47■■□□□ 1.67
SMG8-204ENST00000580498 RPS12P25398 132 aaKnown RBP25.47■■□□□ 1.67
SMG8-204ENST00000580498 ANKRD2Q9GZV1 360 aa25.47■■□□□ 1.67
SMG8-204ENST00000580498 CT47B1P0C2W7 299 aaPredicted RBP25.46■■□□□ 1.67
SMG8-204ENST00000580498 IFIT5Q13325 482 aaKnown RBP25.46■■□□□ 1.67
SMG8-204ENST00000580498 DOK7Q18PE1 504 aa25.46■■□□□ 1.67
SMG8-204ENST00000580498 TAF7LQ5H9L4 462 aa25.46■■□□□ 1.67
SMG8-204ENST00000580498 MAP1SQ66K74 1059 aaPredicted RBP25.46■■□□□ 1.67
SMG8-204ENST00000580498 TMEM88BA6NKF7 163 aa25.45■■□□□ 1.66
SMG8-204ENST00000580498 KCNJ4P48050 445 aa25.45■■□□□ 1.66
SMG8-204ENST00000580498 FAM161AQ3B820 660 aa25.45■■□□□ 1.66
SMG8-204ENST00000580498 DPF2Q92785 391 aa25.45■■□□□ 1.66
SMG8-204ENST00000580498 LTBP1Q14766 1721 aa25.45■■□□□ 1.66
SMG8-204ENST00000580498 SPEF2Q9C093 1822 aa25.44■■□□□ 1.66
SMG8-204ENST00000580498 ADAMTSL1Q8N6G6 1762 aa25.44■■□□□ 1.66
SMG8-204ENST00000580498 YDJCA8MPS7 323 aa25.44■■□□□ 1.66
SMG8-204ENST00000580498 CSF1RP07333 972 aa25.44■■□□□ 1.66
SMG8-204ENST00000580498 CASP7P55210 303 aa25.44■■□□□ 1.66
SMG8-204ENST00000580498 ALDH1L2Q3SY69 923 aa25.44■■□□□ 1.66
SMG8-204ENST00000580498 CNOT7Q9UIV1 285 aaKnown RBP25.44■■□□□ 1.66
SMG8-204ENST00000580498 MINPP1Q9UNW1 487 aa25.44■■□□□ 1.66
SMG8-204ENST00000580498 PASKQ96RG2 1323 aa25.43■■□□□ 1.66
SMG8-204ENST00000580498 PSMD14O00487 310 aa25.43■■□□□ 1.66
SMG8-204ENST00000580498 CCDC57Q2TAC2 916 aa25.43■■□□□ 1.66
SMG8-204ENST00000580498 DIEXFQ68CQ4 756 aaKnown RBP25.43■■□□□ 1.66
SMG8-204ENST00000580498 LEMD3Q9Y2U8 911 aa25.43■■□□□ 1.66
SMG8-204ENST00000580498 CCT4P50991 539 aaKnown RBP25.42■■□□□ 1.66
SMG8-204ENST00000580498 PODNQ7Z5L7 613 aa25.42■■□□□ 1.66
SMG8-204ENST00000580498 MRPL50Q8N5N7 158 aaKnown RBP25.42■■□□□ 1.66
SMG8-204ENST00000580498 ZC3H15Q8WU90 426 aaKnown RBP25.42■■□□□ 1.66
SMG8-204ENST00000580498 COL4A1P02462 1669 aa25.42■■□□□ 1.66
SMG8-204ENST00000580498 ITGBL1O95965 494 aaPredicted RBP25.41■■□□□ 1.66
SMG8-204ENST00000580498 MICALL2Q8IY33 904 aa25.41■■□□□ 1.66
SMG8-204ENST00000580498 GPR101Q96P66 508 aaPredicted RBP25.41■■□□□ 1.66
SMG8-204ENST00000580498 SMC4Q9NTJ3 1288 aa25.41■■□□□ 1.66
SMG8-204ENST00000580498 MED23Q9ULK4 1368 aa25.41■■□□□ 1.66
SMG8-204ENST00000580498 JMYQ8N9B5 988 aa25.39■■□□□ 1.66
SMG8-204ENST00000580498 SSH1Q8WYL5 1049 aa25.39■■□□□ 1.66
SMG8-204ENST00000580498 LMBR1LQ6UX01 489 aa25.38■■□□□ 1.65
SMG8-204ENST00000580498 CDCA7LQ96GN5 454 aa25.38■■□□□ 1.65
SMG8-204ENST00000580498 ZBTB12Q9Y330 459 aaPredicted RBP25.38■■□□□ 1.65
SMG8-204ENST00000580498 VIL1P09327 827 aaKnown RBP25.37■■□□□ 1.65
SMG8-204ENST00000580498 COA1Q9GZY4 146 aa25.37■■□□□ 1.65
SMG8-204ENST00000580498 ABT1Q9ULW3 272 aaKnown RBP25.37■■□□□ 1.65
SMG8-204ENST00000580498 ZNF804BA4D1E1 1349 aa25.37■■□□□ 1.65
SMG8-204ENST00000580498 USP17L3A6NCW0 530 aa25.36■■□□□ 1.65
SMG8-204ENST00000580498 USP17L4A6NCW7 530 aa25.36■■□□□ 1.65
SMG8-204ENST00000580498 FOXO4P98177 505 aa25.36■■□□□ 1.65
SMG8-204ENST00000580498 USP17L1Q7RTZ2 530 aa25.36■■□□□ 1.65
SMG8-204ENST00000580498 AGBL3Q8NEM8 1001 aa25.36■■□□□ 1.65
SMG8-204ENST00000580498 CNNM1Q9NRU3 951 aa25.36■■□□□ 1.65
SMG8-204ENST00000580498 MKRN1Q9UHC7 482 aaKnown RBP25.36■■□□□ 1.65
SMG8-204ENST00000580498 CHRNDQ07001 517 aa25.35■■□□□ 1.65
SMG8-204ENST00000580498 RSBN1LQ6PCB5 846 aaPredicted RBP25.35■■□□□ 1.65
SMG8-204ENST00000580498 LDHAL6AQ6ZMR3 332 aa25.34■■□□□ 1.65
SMG8-204ENST00000580498 CDC37L1Q7L3B6 337 aa25.34■■□□□ 1.65
SMG8-204ENST00000580498 FBXW7Q969H0 707 aa25.34■■□□□ 1.65
SMG8-204ENST00000580498 HDAC5Q9UQL6 1122 aa25.34■■□□□ 1.65
SMG8-204ENST00000580498 MYO3BQ8WXR4 1341 aa25.34■■□□□ 1.65
SMG8-204ENST00000580498 CNTNAP1P78357 1384 aa25.33■■□□□ 1.65
SMG8-204ENST00000580498 TRMT2AQ8IZ69 625 aaKnown RBP25.33■■□□□ 1.65
SMG8-204ENST00000580498 DCPSQ96C86 337 aaKnown RBP25.33■■□□□ 1.65
SMG8-204ENST00000580498 TRPM7Q96QT4 1865 aa25.32■■□□□ 1.64
SMG8-204ENST00000580498 KIF4BQ2VIQ3 1234 aa25.32■■□□□ 1.64
SMG8-204ENST00000580498 RBM26Q5T8P6 1007 aaKnown RBP25.32■■□□□ 1.64
SMG8-204ENST00000580498 OGFOD1Q8N543 542 aa25.32■■□□□ 1.64
SMG8-204ENST00000580498 TRPM4Q8TD43 1214 aa25.32■■□□□ 1.64
SMG8-204ENST00000580498 API5Q9BZZ5 524 aaKnown RBP25.32■■□□□ 1.64
SMG8-204ENST00000580498 PGAP2Q9UHJ9 254 aa25.32■■□□□ 1.64
SMG8-204ENST00000580498 MMP14P50281 582 aa25.31■■□□□ 1.64
SMG8-204ENST00000580498 DEFB115Q30KQ5 88 aa25.31■■□□□ 1.64
SMG8-204ENST00000580498 TBC1D10BQ4KMP7 808 aaPredicted RBP25.31■■□□□ 1.64
SMG8-204ENST00000580498 SAMD7Q7Z3H4 446 aa25.31■■□□□ 1.64
SMG8-204ENST00000580498 KCNQ5Q9NR82 932 aa25.31■■□□□ 1.64
SMG8-204ENST00000580498 PSME4Q14997 1843 aa25.3■■□□□ 1.64
SMG8-204ENST00000580498 ZNF609O15014 1411 aa25.3■■□□□ 1.64
SMG8-204ENST00000580498 USP17L8P0C7I0 530 aa25.3■■□□□ 1.64
SMG8-204ENST00000580498 PAXIP1Q6ZW49 1069 aaPredicted RBP25.3■■□□□ 1.64
SMG8-204ENST00000580498 SUCLG2Q96I99 432 aa25.3■■□□□ 1.64
SMG8-204ENST00000580498 UTYO14607 1347 aa25.3■■□□□ 1.64
SMG8-204ENST00000580498 KIF16BQ96L93 1317 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms