RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 XAGE2Q96GT9 111 aa17.98■□□□□ 0.47
CDK5RAP3-218ENST00000580391 FAM227BQ96M60 508 aa17.98■□□□□ 0.47
CDK5RAP3-218ENST00000580391 SETDB2Q96T68 719 aa17.98■□□□□ 0.47
CDK5RAP3-218ENST00000580391 RAD50Q92878 1312 aa17.98■□□□□ 0.47
CDK5RAP3-218ENST00000580391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-218ENST00000580391 NMIQ13287 307 aaPredicted RBP17.97■□□□□ 0.47
CDK5RAP3-218ENST00000580391 DDX46Q7L014 1031 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-218ENST00000580391 PALD1Q9ULE6 856 aa17.97■□□□□ 0.47
CDK5RAP3-218ENST00000580391 MYO5AQ9Y4I1 1855 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-218ENST00000580391 A0A0D9SFI3 127 aa17.97■□□□□ 0.47
CDK5RAP3-218ENST00000580391 TXNRD1Q16881 649 aa17.97■□□□□ 0.47
CDK5RAP3-218ENST00000580391 RUFY2Q8WXA3 655 aa17.97■□□□□ 0.47
CDK5RAP3-218ENST00000580391 SNX21Q969T3 373 aa17.97■□□□□ 0.47
CDK5RAP3-218ENST00000580391 LSG1Q9H089 658 aaKnown RBP17.97■□□□□ 0.47
CDK5RAP3-218ENST00000580391 RFX7Q2KHR2 1363 aa17.96■□□□□ 0.47
CDK5RAP3-218ENST00000580391 HIP1O00291 1037 aa17.96■□□□□ 0.47
CDK5RAP3-218ENST00000580391 RABEP1Q15276 862 aa17.96■□□□□ 0.47
CDK5RAP3-218ENST00000580391 NBPF5PQ86XG9 351 aaPredicted RBP17.96■□□□□ 0.47
CDK5RAP3-218ENST00000580391 PROM2Q8N271 834 aa17.96■□□□□ 0.47
CDK5RAP3-218ENST00000580391 NYXQ9GZU5 481 aa17.96■□□□□ 0.47
CDK5RAP3-218ENST00000580391 RGS17Q9UGC6 210 aaPredicted RBP17.96■□□□□ 0.47
CDK5RAP3-218ENST00000580391 PDE8BO95263 885 aa17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 IFIT1P09914 478 aaKnown RBP17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 ADRA2BP18089 450 aa17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 GTF2E1P29083 439 aaPredicted RBP17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 CCDC24Q8N4L8 307 aa17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 HELBQ8NG08 1087 aaPredicted RBP17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 MCCP23508 829 aa17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 TTC39AQ5SRH9 613 aa17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 GORABQ5T7V8 394 aa17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 ILDR1Q86SU0 546 aaPredicted RBP17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 MPHOSPH8Q99549 860 aa17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 PAG1Q9NWQ8 432 aa17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 MROH5Q6ZUA9 1318 aa17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 MED23Q9ULK4 1368 aa17.95■□□□□ 0.46
CDK5RAP3-218ENST00000580391 RGPD3A6NKT7 1758 aaPredicted RBP17.94■□□□□ 0.46
CDK5RAP3-218ENST00000580391 RGPD4Q7Z3J3 1758 aa17.94■□□□□ 0.46
CDK5RAP3-218ENST00000580391 CARMIL3Q8ND23 1372 aa17.94■□□□□ 0.46
CDK5RAP3-218ENST00000580391 GOLIM4O00461 696 aa17.94■□□□□ 0.46
CDK5RAP3-218ENST00000580391 CHGBP05060 677 aa17.94■□□□□ 0.46
CDK5RAP3-218ENST00000580391 SF3B3Q15393 1217 aaKnown RBP17.94■□□□□ 0.46
CDK5RAP3-218ENST00000580391 EPB41L2O43491 1005 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 IGHMBP2P38935 993 aaKnown RBP17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 CCDC158Q5M9N0 1113 aa17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 SLC10A5Q5PT55 438 aa17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 SLKQ9H2G2 1235 aaPredicted RBP17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 SSFA2P28290 1259 aa17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 HSPA4P34932 840 aa17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 SCARF1Q14162 830 aa17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 NFIXQ14938 502 aa17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 POTEAQ6S8J7 498 aa17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 KBTBD3Q8NAB2 608 aa17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 SPRYD3Q8NCJ5 442 aa17.93■□□□□ 0.46
CDK5RAP3-218ENST00000580391 FGFR2P21802 821 aa17.92■□□□□ 0.46
CDK5RAP3-218ENST00000580391 PTH1RQ03431 593 aa17.92■□□□□ 0.46
CDK5RAP3-218ENST00000580391 PUM3Q15397 648 aaKnown RBP17.92■□□□□ 0.46
CDK5RAP3-218ENST00000580391 KIAA1211Q6ZU35 1233 aa17.92■□□□□ 0.46
CDK5RAP3-218ENST00000580391 CDC5LQ99459 802 aaKnown RBP17.92■□□□□ 0.46
CDK5RAP3-218ENST00000580391 CCDC171Q6TFL3 1326 aa17.92■□□□□ 0.46
CDK5RAP3-218ENST00000580391 SNAP23O00161 211 aa17.91■□□□□ 0.46
CDK5RAP3-218ENST00000580391 TAF5LO75529 589 aa17.91■□□□□ 0.46
CDK5RAP3-218ENST00000580391 APBA3O96018 575 aa17.91■□□□□ 0.46
CDK5RAP3-218ENST00000580391 ZNF589Q86UQ0 364 aaPredicted RBP17.91■□□□□ 0.46
CDK5RAP3-218ENST00000580391 ANTXR1Q9H6X2 564 aa17.91■□□□□ 0.46
CDK5RAP3-218ENST00000580391 SNRKQ9NRH2 765 aa17.91■□□□□ 0.46
CDK5RAP3-218ENST00000580391 GYS1P13807 737 aa17.91■□□□□ 0.46
CDK5RAP3-218ENST00000580391 ANAPC15P60006 121 aa17.91■□□□□ 0.46
CDK5RAP3-218ENST00000580391 PI16Q6UXB8 463 aa17.91■□□□□ 0.46
CDK5RAP3-218ENST00000580391 TPTE2Q6XPS3 522 aa17.91■□□□□ 0.46
CDK5RAP3-218ENST00000580391 ZNF827Q17R98 1081 aa17.9■□□□□ 0.46
CDK5RAP3-218ENST00000580391 LPIN2Q92539 896 aa17.9■□□□□ 0.46
CDK5RAP3-218ENST00000580391 DOCK2Q92608 1830 aa17.9■□□□□ 0.46
CDK5RAP3-218ENST00000580391 K7ELQ4 463 aaPredicted RBP17.9■□□□□ 0.46
CDK5RAP3-218ENST00000580391 PLSCR1O15162 318 aa17.9■□□□□ 0.46
CDK5RAP3-218ENST00000580391 FKBP4Q02790 459 aaKnown RBP eCLIP17.9■□□□□ 0.46
CDK5RAP3-218ENST00000580391 CHRNDQ07001 517 aa17.9■□□□□ 0.46
CDK5RAP3-218ENST00000580391 ANKRD18AQ8IVF6 992 aa17.9■□□□□ 0.46
CDK5RAP3-218ENST00000580391 MCAMP43121 646 aa17.89■□□□□ 0.45
CDK5RAP3-218ENST00000580391 PHKA1P46020 1223 aa17.89■□□□□ 0.45
CDK5RAP3-218ENST00000580391 SLFNL1Q499Z3 407 aa17.89■□□□□ 0.45
CDK5RAP3-218ENST00000580391 CELF1Q92879 486 aaKnown RBP17.89■□□□□ 0.45
CDK5RAP3-218ENST00000580391 IL17RAQ96F46 866 aa17.89■□□□□ 0.45
CDK5RAP3-218ENST00000580391 NLRP3Q96P20 1036 aa17.89■□□□□ 0.45
CDK5RAP3-218ENST00000580391 SEC62Q99442 399 aaKnown RBP17.89■□□□□ 0.45
CDK5RAP3-218ENST00000580391 NPHP1O15259 732 aa17.88■□□□□ 0.45
CDK5RAP3-218ENST00000580391 SLC5A1P13866 664 aa17.88■□□□□ 0.45
CDK5RAP3-218ENST00000580391 ZAP70P43403 619 aa17.88■□□□□ 0.45
CDK5RAP3-218ENST00000580391 CCDC102BQ68D86 513 aa17.88■□□□□ 0.45
CDK5RAP3-218ENST00000580391 CCDC129Q6ZRS4 1044 aa17.88■□□□□ 0.45
CDK5RAP3-218ENST00000580391 CNBD1Q8NA66 436 aa17.88■□□□□ 0.45
CDK5RAP3-218ENST00000580391 SNX14Q9Y5W7 946 aa17.88■□□□□ 0.45
CDK5RAP3-218ENST00000580391 MYH13Q9UKX3 1938 aa17.87■□□□□ 0.45
CDK5RAP3-218ENST00000580391 ST18O60284 1047 aa17.87■□□□□ 0.45
CDK5RAP3-218ENST00000580391 RASEFQ8IZ41 740 aa17.87■□□□□ 0.45
CDK5RAP3-218ENST00000580391 ANP32EQ9BTT0 268 aa17.87■□□□□ 0.45
CDK5RAP3-218ENST00000580391 RBM8AQ9Y5S9 174 aaKnown RBP17.87■□□□□ 0.45
CDK5RAP3-218ENST00000580391 ARID4AP29374 1257 aaPredicted RBP17.86■□□□□ 0.45
CDK5RAP3-218ENST00000580391 ZNF512BQ96KM6 892 aaPredicted RBP17.86■□□□□ 0.45
CDK5RAP3-218ENST00000580391 NEK4P51957 841 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms