RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 CDHR2Q9BYE9 1310 aa31.64■■■□□ 2.66
CDC42EP4-205ENST00000580315 GRM1Q13255 1194 aa31.63■■■□□ 2.65
CDC42EP4-205ENST00000580315 CWF19L2Q2TBE0 894 aaKnown RBP31.63■■■□□ 2.65
CDC42EP4-205ENST00000580315 CDCA7LQ96GN5 454 aa31.63■■■□□ 2.65
CDC42EP4-205ENST00000580315 BCL2L13Q9BXK5 485 aa31.63■■■□□ 2.65
CDC42EP4-205ENST00000580315 PDE8AO60658 829 aa31.62■■■□□ 2.65
CDC42EP4-205ENST00000580315 DDX60Q8IY21 1712 aaKnown RBP31.62■■■□□ 2.65
CDC42EP4-205ENST00000580315 YDJCA8MPS7 323 aa31.61■■■□□ 2.65
CDC42EP4-205ENST00000580315 HIRAP54198 1017 aaPredicted RBP31.61■■■□□ 2.65
CDC42EP4-205ENST00000580315 LINS1Q8NG48 757 aa31.61■■■□□ 2.65
CDC42EP4-205ENST00000580315 JARID2Q92833 1246 aaPredicted RBP31.61■■■□□ 2.65
CDC42EP4-205ENST00000580315 GLIS2Q9BZE0 524 aaPredicted RBP31.61■■■□□ 2.65
CDC42EP4-205ENST00000580315 TRPM7Q96QT4 1865 aa31.61■■■□□ 2.65
CDC42EP4-205ENST00000580315 CELF2O95319 508 aaKnown RBP31.6■■■□□ 2.65
CDC42EP4-205ENST00000580315 CCDC152Q4G0S7 254 aa31.6■■■□□ 2.65
CDC42EP4-205ENST00000580315 ZC3H15Q8WU90 426 aaKnown RBP31.6■■■□□ 2.65
CDC42EP4-205ENST00000580315 THSD7BQ9C0I4 1608 aa31.6■■■□□ 2.65
CDC42EP4-205ENST00000580315 SAPCD2Q86UD0 394 aa31.59■■■□□ 2.65
CDC42EP4-205ENST00000580315 BEGAINQ9BUH8 593 aa31.59■■■□□ 2.65
CDC42EP4-205ENST00000580315 CNOT7Q9UIV1 285 aaKnown RBP31.59■■■□□ 2.65
CDC42EP4-205ENST00000580315 CACNA1FO60840 1977 aa31.59■■■□□ 2.65
CDC42EP4-205ENST00000580315 DUOX1Q9NRD9 1551 aa31.59■■■□□ 2.65
CDC42EP4-205ENST00000580315 TAF1P21675 1872 aa31.59■■■□□ 2.65
CDC42EP4-205ENST00000580315 GCKRQ14397 625 aa31.58■■■□□ 2.65
CDC42EP4-205ENST00000580315 TRPM4Q8TD43 1214 aa31.58■■■□□ 2.65
CDC42EP4-205ENST00000580315 TRMT2AQ8IZ69 625 aaKnown RBP31.57■■■□□ 2.64
CDC42EP4-205ENST00000580315 CELF1Q92879 486 aaKnown RBP31.57■■■□□ 2.64
CDC42EP4-205ENST00000580315 SHTN1A0MZ66 631 aa31.56■■■□□ 2.64
CDC42EP4-205ENST00000580315 F6X3S4 739 aa31.56■■■□□ 2.64
CDC42EP4-205ENST00000580315 MAP2K2P36507 400 aa31.56■■■□□ 2.64
CDC42EP4-205ENST00000580315 WASHC4Q2M389 1173 aa31.56■■■□□ 2.64
CDC42EP4-205ENST00000580315 NSFL1CQ9UNZ2 370 aaKnown RBP31.56■■■□□ 2.64
CDC42EP4-205ENST00000580315 H7C1W4 665 aa31.55■■■□□ 2.64
CDC42EP4-205ENST00000580315 AOC2O75106 756 aa31.55■■■□□ 2.64
CDC42EP4-205ENST00000580315 UBE3BQ7Z3V4 1068 aa31.55■■■□□ 2.64
CDC42EP4-205ENST00000580315 LRRC37AA6NMS7 1700 aa31.55■■■□□ 2.64
CDC42EP4-205ENST00000580315 RPS8P62241 208 aaKnown RBP31.54■■■□□ 2.64
CDC42EP4-205ENST00000580315 CDC37L1Q7L3B6 337 aa31.54■■■□□ 2.64
CDC42EP4-205ENST00000580315 MICALL2Q8IY33 904 aa31.54■■■□□ 2.64
CDC42EP4-205ENST00000580315 MRPL50Q8N5N7 158 aaKnown RBP31.54■■■□□ 2.64
CDC42EP4-205ENST00000580315 H7C1D1 291 aa31.53■■■□□ 2.64
CDC42EP4-205ENST00000580315 CT47B1P0C2W7 299 aaPredicted RBP31.53■■■□□ 2.64
CDC42EP4-205ENST00000580315 CTSWP56202 376 aa31.53■■■□□ 2.64
CDC42EP4-205ENST00000580315 ABHD8Q96I13 439 aa31.53■■■□□ 2.64
CDC42EP4-205ENST00000580315 HHIPL1Q96JK4 782 aa31.53■■■□□ 2.64
CDC42EP4-205ENST00000580315 ZBTB12Q9Y330 459 aaPredicted RBP31.53■■■□□ 2.64
CDC42EP4-205ENST00000580315 BEND3Q5T5X7 828 aa31.52■■■□□ 2.64
CDC42EP4-205ENST00000580315 DPF2Q92785 391 aa31.52■■■□□ 2.64
CDC42EP4-205ENST00000580315 ZNF408Q9H9D4 720 aa31.52■■■□□ 2.64
CDC42EP4-205ENST00000580315 DBNDD1Q9H9R9 158 aa31.52■■■□□ 2.64
CDC42EP4-205ENST00000580315 POLLQ9UGP5 575 aa31.52■■■□□ 2.64
CDC42EP4-205ENST00000580315 PSMD14O00487 310 aa31.51■■■□□ 2.63
CDC42EP4-205ENST00000580315 GPSM2P81274 684 aa31.51■■■□□ 2.63
CDC42EP4-205ENST00000580315 ALDH1L2Q3SY69 923 aa31.51■■■□□ 2.63
CDC42EP4-205ENST00000580315 SSH1Q8WYL5 1049 aa31.51■■■□□ 2.63
CDC42EP4-205ENST00000580315 CCDC85AQ96PX6 553 aaPredicted RBP31.51■■■□□ 2.63
CDC42EP4-205ENST00000580315 SEC31BQ9NQW1 1179 aa31.51■■■□□ 2.63
CDC42EP4-205ENST00000580315 C6orf229H3BNL8 230 aa31.5■■■□□ 2.63
CDC42EP4-205ENST00000580315 RIMBP2O15034 1052 aa31.5■■■□□ 2.63
CDC42EP4-205ENST00000580315 PTPRCP08575 1304 aa31.49■■■□□ 2.63
CDC42EP4-205ENST00000580315 HNRNPUQ00839 825 aaKnown RBP eCLIP31.49■■■□□ 2.63
CDC42EP4-205ENST00000580315 SLC4A10Q6U841 1118 aa31.49■■■□□ 2.63
CDC42EP4-205ENST00000580315 TSKSQ9UJT2 592 aa31.49■■■□□ 2.63
CDC42EP4-205ENST00000580315 COL4A1P02462 1669 aa31.48■■■□□ 2.63
CDC42EP4-205ENST00000580315 SAMD7Q7Z3H4 446 aa31.48■■■□□ 2.63
CDC42EP4-205ENST00000580315 TTLL11Q8NHH1 800 aa31.48■■■□□ 2.63
CDC42EP4-205ENST00000580315 CDC5LQ99459 802 aaKnown RBP31.48■■■□□ 2.63
CDC42EP4-205ENST00000580315 PLA2G12BQ9BX93 195 aa31.48■■■□□ 2.63
CDC42EP4-205ENST00000580315 USP48Q86UV5 1035 aa31.47■■■□□ 2.63
CDC42EP4-205ENST00000580315 ANKRD18AQ8IVF6 992 aa31.47■■■□□ 2.63
CDC42EP4-205ENST00000580315 SRCIN1Q9C0H9 1055 aa31.47■■■□□ 2.63
CDC42EP4-205ENST00000580315 SMC4Q9NTJ3 1288 aa31.47■■■□□ 2.63
CDC42EP4-205ENST00000580315 ALDH1L1O75891 902 aa31.46■■■□□ 2.63
CDC42EP4-205ENST00000580315 CASP7P55210 303 aa31.46■■■□□ 2.63
CDC42EP4-205ENST00000580315 EYA3Q99504 573 aa31.46■■■□□ 2.63
CDC42EP4-205ENST00000580315 KCNQ5Q9NR82 932 aa31.46■■■□□ 2.63
CDC42EP4-205ENST00000580315 ECE2O60344 883 aa31.45■■■□□ 2.63
CDC42EP4-205ENST00000580315 DOK7Q18PE1 504 aa31.45■■■□□ 2.63
CDC42EP4-205ENST00000580315 TBC1D16Q8TBP0 767 aa31.45■■■□□ 2.63
CDC42EP4-205ENST00000580315 RTL9Q8NET4 1388 aa31.44■■■□□ 2.62
CDC42EP4-205ENST00000580315 CA12O43570 354 aa31.44■■■□□ 2.62
CDC42EP4-205ENST00000580315 EGFRP00533 1210 aa31.44■■■□□ 2.62
CDC42EP4-205ENST00000580315 RPS12P25398 132 aaKnown RBP31.44■■■□□ 2.62
CDC42EP4-205ENST00000580315 BRPF1P55201 1214 aaPredicted RBP31.44■■■□□ 2.62
CDC42EP4-205ENST00000580315 TBC1D10BQ4KMP7 808 aaPredicted RBP31.44■■■□□ 2.62
CDC42EP4-205ENST00000580315 DLK2Q6UY11 383 aa31.44■■■□□ 2.62
CDC42EP4-205ENST00000580315 GREM2Q9H772 168 aa31.44■■■□□ 2.62
CDC42EP4-205ENST00000580315 C9orf78Q9NZ63 289 aaPredicted RBP31.44■■■□□ 2.62
CDC42EP4-205ENST00000580315 GRM8O00222 908 aa31.42■■■□□ 2.62
CDC42EP4-205ENST00000580315 KRT26Q7Z3Y9 468 aa31.41■■■□□ 2.62
CDC42EP4-205ENST00000580315 PODXL2Q9NZ53 605 aa31.41■■■□□ 2.62
CDC42EP4-205ENST00000580315 ANKIB1Q9P2G1 1089 aa31.41■■■□□ 2.62
CDC42EP4-205ENST00000580315 HUNKP57058 714 aa31.4■■■□□ 2.62
CDC42EP4-205ENST00000580315 ZC3H12CQ9C0D7 883 aaKnown RBP31.4■■■□□ 2.62
CDC42EP4-205ENST00000580315 CSF1RP07333 972 aa31.39■■■□□ 2.62
CDC42EP4-205ENST00000580315 RBM26Q5T8P6 1007 aaKnown RBP31.39■■■□□ 2.62
CDC42EP4-205ENST00000580315 NOGQ13253 232 aa31.38■■■□□ 2.61
CDC42EP4-205ENST00000580315 ZIC5Q96T25 663 aa31.38■■■□□ 2.61
CDC42EP4-205ENST00000580315 BSDC1Q9NW68 430 aaPredicted RBP31.38■■■□□ 2.61
CDC42EP4-205ENST00000580315 VIL1P09327 827 aaKnown RBP31.37■■■□□ 2.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms