RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 PTCD1O75127 700 aaKnown RBP12.16□□□□□ -0.46
SNX11-206ENST00000580219 UBTFL1P0CB47 393 aaPredicted RBP12.16□□□□□ -0.46
SNX11-206ENST00000580219 TIE1P35590 1138 aa12.16□□□□□ -0.46
SNX11-206ENST00000580219 DDR1Q08345 913 aa12.16□□□□□ -0.46
SNX11-206ENST00000580219 BEND3Q5T5X7 828 aa12.16□□□□□ -0.46
SNX11-206ENST00000580219 ANKRD45Q5TZF3 282 aa12.16□□□□□ -0.46
SNX11-206ENST00000580219 DDRGK1Q96HY6 314 aa12.16□□□□□ -0.46
SNX11-206ENST00000580219 IPO9Q96P70 1041 aaKnown RBP12.16□□□□□ -0.46
SNX11-206ENST00000580219 SLC4A9Q96Q91 983 aa12.16□□□□□ -0.46
SNX11-206ENST00000580219 LNPKQ9C0E8 428 aa12.16□□□□□ -0.46
SNX11-206ENST00000580219 PCDHB8Q9UN66 801 aa12.16□□□□□ -0.46
SNX11-206ENST00000580219 TLL2Q9Y6L7 1015 aa12.16□□□□□ -0.46
SNX11-206ENST00000580219 COL5A3P25940 1745 aaPredicted RBP12.16□□□□□ -0.46
SNX11-206ENST00000580219 CACNA1SQ13698 1873 aa12.16□□□□□ -0.46
SNX11-206ENST00000580219 PI4KAP2A4QPH2 592 aa12.15□□□□□ -0.46
SNX11-206ENST00000580219 EPHX2P34913 555 aa12.15□□□□□ -0.46
SNX11-206ENST00000580219 RFC4P35249 363 aa12.15□□□□□ -0.46
SNX11-206ENST00000580219 ATP6V1AP38606 617 aa12.15□□□□□ -0.46
SNX11-206ENST00000580219 ATN1P54259 1190 aaPredicted RBP12.15□□□□□ -0.46
SNX11-206ENST00000580219 ATP8B2P98198 1209 aa12.15□□□□□ -0.46
SNX11-206ENST00000580219 PDIA6Q15084 440 aa12.15□□□□□ -0.46
SNX11-206ENST00000580219 BMP2KLQ5H9B9 411 aa12.15□□□□□ -0.46
SNX11-206ENST00000580219 VSIG10Q8N0Z9 540 aa12.15□□□□□ -0.46
SNX11-206ENST00000580219 TTLL6Q8N841 843 aa12.15□□□□□ -0.46
SNX11-206ENST00000580219 PI4KAP1Q8N8J0 262 aa12.15□□□□□ -0.46
SNX11-206ENST00000580219 USP44Q9H0E7 712 aa12.15□□□□□ -0.46
SNX11-206ENST00000580219 PRAMEF22A3QJZ6 481 aa12.14□□□□□ -0.47
SNX11-206ENST00000580219 EIF5BO60841 1220 aaKnown RBP12.14□□□□□ -0.47
SNX11-206ENST00000580219 CTU1Q7Z7A3 348 aaKnown RBP12.14□□□□□ -0.47
SNX11-206ENST00000580219 HACL1Q9UJ83 578 aa12.14□□□□□ -0.47
SNX11-206ENST00000580219 MYH14Q7Z406 1995 aaKnown RBP12.14□□□□□ -0.47
SNX11-206ENST00000580219 PROSER3Q2NL68 480 aa12.13□□□□□ -0.47
SNX11-206ENST00000580219 PNMA8AQ86V59 439 aaPredicted RBP12.13□□□□□ -0.47
SNX11-206ENST00000580219 LINS1Q8NG48 757 aa12.13□□□□□ -0.47
SNX11-206ENST00000580219 UPF2Q9HAU5 1272 aaKnown RBP12.13□□□□□ -0.47
SNX11-206ENST00000580219 HTTP42858 3142 aa12.13□□□□□ -0.47
SNX11-206ENST00000580219 LAMA3Q16787 3333 aa12.13□□□□□ -0.47
SNX11-206ENST00000580219 UTYO14607 1347 aa12.12□□□□□ -0.47
SNX11-206ENST00000580219 TTLL13PA6NNM8 815 aa12.12□□□□□ -0.47
SNX11-206ENST00000580219 CST9Q5W186 159 aa12.12□□□□□ -0.47
SNX11-206ENST00000580219 LRP10Q7Z4F1 713 aa12.12□□□□□ -0.47
SNX11-206ENST00000580219 DNAJC10Q8IXB1 793 aa12.12□□□□□ -0.47
SNX11-206ENST00000580219 MAP3K2Q9Y2U5 619 aa12.12□□□□□ -0.47
SNX11-206ENST00000580219 ANXA1P04083 346 aa12.11□□□□□ -0.47
SNX11-206ENST00000580219 MTX1Q13505 466 aa12.11□□□□□ -0.47
SNX11-206ENST00000580219 SSH3Q8TE77 659 aa12.11□□□□□ -0.47
SNX11-206ENST00000580219 COL25A1Q9BXS0 654 aaPredicted RBP12.11□□□□□ -0.47
SNX11-206ENST00000580219 USP16Q9Y5T5 823 aa12.11□□□□□ -0.47
SNX11-206ENST00000580219 LRRFIP2Q9Y608 721 aaKnown RBP12.11□□□□□ -0.47
SNX11-206ENST00000580219 NRXN2Q9P2S2 1712 aa12.11□□□□□ -0.47
SNX11-206ENST00000580219 POLRMTO00411 1230 aaKnown RBP12.1□□□□□ -0.47
SNX11-206ENST00000580219 RAB11FIP3O75154 756 aa12.1□□□□□ -0.47
SNX11-206ENST00000580219 NEXNQ0ZGT2 675 aa12.1□□□□□ -0.47
SNX11-206ENST00000580219 NPM2Q86SE8 214 aaKnown RBP12.1□□□□□ -0.47
SNX11-206ENST00000580219 TEX13AQ9BXU3 409 aaPredicted RBP12.1□□□□□ -0.47
SNX11-206ENST00000580219 COL15A1P39059 1388 aa12.09□□□□□ -0.47
SNX11-206ENST00000580219 TRAF5O00463 557 aa12.09□□□□□ -0.47
SNX11-206ENST00000580219 CYP19A1P11511 503 aaPredicted RBP12.09□□□□□ -0.47
SNX11-206ENST00000580219 HSP90AB4PQ58FF6 505 aa12.09□□□□□ -0.47
SNX11-206ENST00000580219 RIC3Q7Z5B4 369 aa12.09□□□□□ -0.47
SNX11-206ENST00000580219 SAPCD2Q86UD0 394 aa12.09□□□□□ -0.47
SNX11-206ENST00000580219 PLEKHM2Q8IWE5 1019 aa12.09□□□□□ -0.47
SNX11-206ENST00000580219 XAGE3Q8WTP9 111 aa12.09□□□□□ -0.47
SNX11-206ENST00000580219 ZIC5Q96T25 663 aa12.09□□□□□ -0.47
SNX11-206ENST00000580219 METTL22Q9BUU2 404 aaPredicted RBP12.09□□□□□ -0.47
SNX11-206ENST00000580219 TAOK3Q9H2K8 898 aa12.09□□□□□ -0.47
SNX11-206ENST00000580219 OSBPL3Q9H4L5 887 aa12.09□□□□□ -0.47
SNX11-206ENST00000580219 PAPPA2Q9BXP8 1791 aa12.08□□□□□ -0.48
SNX11-206ENST00000580219 PNMA6EA0A0J9YXQ4 647 aa12.08□□□□□ -0.48
SNX11-206ENST00000580219 GRM8O00222 908 aa12.08□□□□□ -0.48
SNX11-206ENST00000580219 C21orf2O43822 256 aa12.08□□□□□ -0.48
SNX11-206ENST00000580219 STARD3NLO95772 234 aa12.08□□□□□ -0.48
SNX11-206ENST00000580219 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
SNX11-206ENST00000580219 COPS6Q7L5N1 327 aa12.08□□□□□ -0.48
SNX11-206ENST00000580219 ZNF467Q7Z7K2 595 aaPredicted RBP12.08□□□□□ -0.48
SNX11-206ENST00000580219 LRRCC1Q9C099 1032 aa12.08□□□□□ -0.48
SNX11-206ENST00000580219 C9orf78Q9NZ63 289 aaPredicted RBP12.08□□□□□ -0.48
SNX11-206ENST00000580219 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
SNX11-206ENST00000580219 NOP58Q9Y2X3 529 aaKnown RBP12.08□□□□□ -0.48
SNX11-206ENST00000580219 CNTNAP4Q9C0A0 1308 aa12.08□□□□□ -0.48
SNX11-206ENST00000580219 ZNF541Q9H0D2 1346 aa12.08□□□□□ -0.48
SNX11-206ENST00000580219 LTBP3Q9NS15 1303 aa12.08□□□□□ -0.48
SNX11-206ENST00000580219 RBBP6Q7Z6E9 1792 aaKnown RBP12.07□□□□□ -0.48
SNX11-206ENST00000580219 A1BGP04217 495 aa12.07□□□□□ -0.48
SNX11-206ENST00000580219 NBPF7P0C2Y1 421 aaPredicted RBP12.07□□□□□ -0.48
SNX11-206ENST00000580219 COL11A2P13942 1736 aaPredicted RBP12.07□□□□□ -0.48
SNX11-206ENST00000580219 MYL6BP14649 208 aa12.07□□□□□ -0.48
SNX11-206ENST00000580219 CRKLP46109 303 aaKnown RBP12.07□□□□□ -0.48
SNX11-206ENST00000580219 TTC22Q5TAA0 569 aa12.07□□□□□ -0.48
SNX11-206ENST00000580219 PPP1R42Q7Z4L9 355 aa12.07□□□□□ -0.48
SNX11-206ENST00000580219 PLBD2Q8NHP8 589 aa12.07□□□□□ -0.48
SNX11-206ENST00000580219 TBC1D32Q96NH3 1257 aa12.07□□□□□ -0.48
SNX11-206ENST00000580219 TMEM106CQ9BVX2 250 aa12.07□□□□□ -0.48
SNX11-206ENST00000580219 SAGE1Q9NXZ1 904 aa12.07□□□□□ -0.48
SNX11-206ENST00000580219 AOX1Q06278 1338 aa12.07□□□□□ -0.48
SNX11-206ENST00000580219 NEURL1BA8MQ27 555 aa12.06□□□□□ -0.48
SNX11-206ENST00000580219 NBPF26B4DH59 902 aa12.06□□□□□ -0.48
SNX11-206ENST00000580219 AIMP1Q12904 312 aaKnown RBP12.06□□□□□ -0.48
SNX11-206ENST00000580219 RC3H1Q5TC82 1133 aaKnown RBP12.06□□□□□ -0.48
SNX11-206ENST00000580219 NBPF10Q6P3W6 841 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms