RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 KRT85P78386 507 aa12.44□□□□□ -0.42
TOP3A-209ENST00000580095 GUCY1B3Q02153 619 aa12.44□□□□□ -0.42
TOP3A-209ENST00000580095 SPC24Q8NBT2 197 aa12.44□□□□□ -0.42
TOP3A-209ENST00000580095 GPHNQ9NQX3 736 aaPredicted RBP12.44□□□□□ -0.42
TOP3A-209ENST00000580095 APOBRQ0VD83 1088 aa12.43□□□□□ -0.42
TOP3A-209ENST00000580095 PI16Q6UXB8 463 aa12.43□□□□□ -0.42
TOP3A-209ENST00000580095 BRINP3Q76B58 766 aa12.43□□□□□ -0.42
TOP3A-209ENST00000580095 RAB11FIP4Q86YS3 637 aa12.43□□□□□ -0.42
TOP3A-209ENST00000580095 FAM89AQ96GI7 184 aa12.43□□□□□ -0.42
TOP3A-209ENST00000580095 PAG1Q9NWQ8 432 aa12.43□□□□□ -0.42
TOP3A-209ENST00000580095 DACT1Q9NYF0 836 aa12.43□□□□□ -0.42
TOP3A-209ENST00000580095 SIPA1L3O60292 1781 aaPredicted RBP12.43□□□□□ -0.42
TOP3A-209ENST00000580095 H7C1W4 665 aa12.43□□□□□ -0.42
TOP3A-209ENST00000580095 HS1BP3Q53T59 392 aa12.43□□□□□ -0.42
TOP3A-209ENST00000580095 ADORA1P30542 326 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 HAND2P61296 217 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 KBTBD3Q8NAB2 608 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 SPATA32Q96LK8 384 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 ARID3AQ99856 593 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 DCCP43146 1447 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 A0A1B0GUL7 405 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 GOLGA6L4A6NEF3 574 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 SCRN1Q12765 414 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 ANKRD1Q15327 319 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 USPL1Q5W0Q7 1092 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 TNS3Q68CZ2 1445 aa12.42□□□□□ -0.42
TOP3A-209ENST00000580095 A0A087WWV3 80 aa12.41□□□□□ -0.42
TOP3A-209ENST00000580095 ZNF500O60304 480 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-209ENST00000580095 GPTP24298 496 aa12.41□□□□□ -0.42
TOP3A-209ENST00000580095 GTF3C6Q969F1 213 aa12.41□□□□□ -0.42
TOP3A-209ENST00000580095 HMG20BQ9P0W2 317 aa12.41□□□□□ -0.42
TOP3A-209ENST00000580095 H3BQV1 296 aa12.41□□□□□ -0.42
TOP3A-209ENST00000580095 IFIT1P09914 478 aaKnown RBP12.41□□□□□ -0.42
TOP3A-209ENST00000580095 IFFO2Q5TF58 517 aa12.41□□□□□ -0.42
TOP3A-209ENST00000580095 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-209ENST00000580095 LUZP1Q86V48 1076 aa12.41□□□□□ -0.42
TOP3A-209ENST00000580095 FUCA2Q9BTY2 467 aa12.41□□□□□ -0.42
TOP3A-209ENST00000580095 ASAP1Q9ULH1 1129 aa12.41□□□□□ -0.42
TOP3A-209ENST00000580095 SCARF1Q14162 830 aa12.41□□□□□ -0.42
TOP3A-209ENST00000580095 LEO1Q8WVC0 666 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-209ENST00000580095 U3KPZ7 1027 aaPredicted RBP12.41□□□□□ -0.42
TOP3A-209ENST00000580095 KDM4AO75164 1064 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 NR1I2O75469 434 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 PDCP20941 246 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 GORABQ5T7V8 394 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 BICD2Q8TD16 824 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 PGBD1Q96JS3 809 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 ALS2Q96Q42 1657 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 CAMTA1Q9Y6Y1 1673 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 M0R2C6 588 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 EYA2O00167 538 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 EVA1CP58658 441 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 WASHC4Q2M389 1173 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 DNTTIP2Q5QJE6 756 aaKnown RBP12.4□□□□□ -0.42
TOP3A-209ENST00000580095 FAM184AQ8NB25 1140 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 NUP62CLQ9H1M0 184 aa12.4□□□□□ -0.42
TOP3A-209ENST00000580095 SCN11AQ9UI33 1791 aa12.4□□□□□ -0.43
TOP3A-209ENST00000580095 WDR17Q8IZU2 1322 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 PCDH11XQ9BZA7 1347 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 PCDH11YQ9BZA8 1340 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 HSPD1P10809 573 aaKnown RBP12.39□□□□□ -0.43
TOP3A-209ENST00000580095 CSPP1Q1MSJ5 1256 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 KRT32Q14532 448 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 TSGA10IPQ3SY00 556 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 OTUD7BQ6GQQ9 843 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 DNAJC10Q8IXB1 793 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 IPO4Q8TEX9 1081 aaKnown RBP12.39□□□□□ -0.43
TOP3A-209ENST00000580095 TSC1Q92574 1164 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 OSBP2Q969R2 916 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 FAM13BQ9NYF5 915 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 MAST3O60307 1309 aa12.39□□□□□ -0.43
TOP3A-209ENST00000580095 A0A0G2JS52 829 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 CTDNEP1O95476 244 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 IL15P40933 162 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-209ENST00000580095 ERCC4Q92889 916 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-209ENST00000580095 TNMDQ9H2S6 317 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 ADAMTS7Q9UKP4 1686 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 LETM1O95202 739 aaPredicted RBP12.38□□□□□ -0.43
TOP3A-209ENST00000580095 IL2RBP14784 551 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 TYRO3Q06418 890 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 MAP3K11Q16584 847 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 PDCL3Q9H2J4 239 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 CEP126Q9P2H0 1117 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 XIRP1Q702N8 1843 aaKnown RBP12.38□□□□□ -0.43
TOP3A-209ENST00000580095 JCADQ9P266 1359 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 FAM177BA6PVY3 158 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 E7EWF7 191 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 CCDC192P0DO97 292 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 KIAA2012Q0VF49 1180 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 CCDC57Q2TAC2 916 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 GJB4Q9NTQ9 266 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 MRVI1Q9Y6F6 885 aa12.38□□□□□ -0.43
TOP3A-209ENST00000580095 UQCRHLA0A096LP55 91 aa12.37□□□□□ -0.43
TOP3A-209ENST00000580095 PTPDC1A2A3K4 754 aa12.37□□□□□ -0.43
TOP3A-209ENST00000580095 UQCRHP07919 91 aa12.37□□□□□ -0.43
TOP3A-209ENST00000580095 RESTQ13127 1097 aa12.37□□□□□ -0.43
TOP3A-209ENST00000580095 ANO6Q4KMQ2 910 aa12.37□□□□□ -0.43
TOP3A-209ENST00000580095 DHX32Q7L7V1 743 aaKnown RBP12.37□□□□□ -0.43
TOP3A-209ENST00000580095 SYTL4Q96C24 671 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms