RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 CCDC191Q8NCU4 936 aa17.24■□□□□ 0.35
TRAF4-214ENST00000580073 TRPM4Q8TD43 1214 aa17.24■□□□□ 0.35
TRAF4-214ENST00000580073 MRS2Q9HD23 443 aa17.24■□□□□ 0.35
TRAF4-214ENST00000580073 PSMD14O00487 310 aa17.23■□□□□ 0.35
TRAF4-214ENST00000580073 RPS8P62241 208 aaKnown RBP17.23■□□□□ 0.35
TRAF4-214ENST00000580073 DCPSQ96C86 337 aaKnown RBP17.23■□□□□ 0.35
TRAF4-214ENST00000580073 ABHD8Q96I13 439 aa17.23■□□□□ 0.35
TRAF4-214ENST00000580073 ZC3H12CQ9C0D7 883 aaKnown RBP17.23■□□□□ 0.35
TRAF4-214ENST00000580073 COL4A1P02462 1669 aa17.23■□□□□ 0.35
TRAF4-214ENST00000580073 RIMBP2O15034 1052 aa17.22■□□□□ 0.35
TRAF4-214ENST00000580073 GPSM2P81274 684 aa17.22■□□□□ 0.35
TRAF4-214ENST00000580073 PODXL2Q9NZ53 605 aa17.22■□□□□ 0.35
TRAF4-214ENST00000580073 ANKIB1Q9P2G1 1089 aa17.22■□□□□ 0.35
TRAF4-214ENST00000580073 GGA1Q9UJY5 639 aa17.22■□□□□ 0.35
TRAF4-214ENST00000580073 PAPPA2Q9BXP8 1791 aa17.22■□□□□ 0.35
TRAF4-214ENST00000580073 PDE8AO60658 829 aa17.21■□□□□ 0.35
TRAF4-214ENST00000580073 UFL1O94874 794 aa17.21■□□□□ 0.35
TRAF4-214ENST00000580073 PCCAP05165 728 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-214ENST00000580073 ZNF853P0CG23 659 aa17.21■□□□□ 0.35
TRAF4-214ENST00000580073 RTL5Q5HYW3 569 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-214ENST00000580073 CCDC30Q5VVM6 783 aa17.21■□□□□ 0.35
TRAF4-214ENST00000580073 KRT26Q7Z3Y9 468 aa17.21■□□□□ 0.35
TRAF4-214ENST00000580073 TBC1D16Q8TBP0 767 aa17.21■□□□□ 0.35
TRAF4-214ENST00000580073 CWC25Q9NXE8 425 aaPredicted RBP17.21■□□□□ 0.35
TRAF4-214ENST00000580073 POLLQ9UGP5 575 aa17.21■□□□□ 0.35
TRAF4-214ENST00000580073 HIRAP54198 1017 aaPredicted RBP17.2■□□□□ 0.34
TRAF4-214ENST00000580073 HUNKP57058 714 aa17.2■□□□□ 0.34
TRAF4-214ENST00000580073 KIF4BQ2VIQ3 1234 aa17.2■□□□□ 0.34
TRAF4-214ENST00000580073 C2orf69Q8N8R5 385 aa17.2■□□□□ 0.34
TRAF4-214ENST00000580073 MYD88Q99836 296 aa17.2■□□□□ 0.34
TRAF4-214ENST00000580073 ZBTB12Q9Y330 459 aaPredicted RBP17.2■□□□□ 0.34
TRAF4-214ENST00000580073 XDHP47989 1333 aa17.2■□□□□ 0.34
TRAF4-214ENST00000580073 AOC2O75106 756 aa17.19■□□□□ 0.34
TRAF4-214ENST00000580073 NEXNQ0ZGT2 675 aa17.19■□□□□ 0.34
TRAF4-214ENST00000580073 TBC1D10BQ4KMP7 808 aaPredicted RBP17.19■□□□□ 0.34
TRAF4-214ENST00000580073 SAMD7Q7Z3H4 446 aa17.19■□□□□ 0.34
TRAF4-214ENST00000580073 USP48Q86UV5 1035 aa17.19■□□□□ 0.34
TRAF4-214ENST00000580073 ANKRD18AQ8IVF6 992 aa17.19■□□□□ 0.34
TRAF4-214ENST00000580073 SULF1Q8IWU6 871 aa17.19■□□□□ 0.34
TRAF4-214ENST00000580073 CDC5LQ99459 802 aaKnown RBP17.19■□□□□ 0.34
TRAF4-214ENST00000580073 ZNF646O15015 1829 aaPredicted RBP17.19■□□□□ 0.34
TRAF4-214ENST00000580073 ECM29Q5VYK3 1845 aa17.19■□□□□ 0.34
TRAF4-214ENST00000580073 RTL9Q8NET4 1388 aa17.18■□□□□ 0.34
TRAF4-214ENST00000580073 APAF1O14727 1248 aa17.18■□□□□ 0.34
TRAF4-214ENST00000580073 AGBL3Q8NEM8 1001 aa17.18■□□□□ 0.34
TRAF4-214ENST00000580073 CCDC102AQ96A19 550 aa17.18■□□□□ 0.34
TRAF4-214ENST00000580073 ZNF428Q96B54 188 aa17.18■□□□□ 0.34
TRAF4-214ENST00000580073 STK31Q9BXU1 1019 aa17.18■□□□□ 0.34
TRAF4-214ENST00000580073 GBA2Q9HCG7 927 aaPredicted RBP17.18■□□□□ 0.34
TRAF4-214ENST00000580073 DOK7Q18PE1 504 aa17.17■□□□□ 0.34
TRAF4-214ENST00000580073 RGMBQ6NW40 437 aa17.17■□□□□ 0.34
TRAF4-214ENST00000580073 METTL22Q9BUU2 404 aaPredicted RBP17.17■□□□□ 0.34
TRAF4-214ENST00000580073 PHAXQ9H814 394 aaKnown RBP17.17■□□□□ 0.34
TRAF4-214ENST00000580073 A0A1B0GUL6 1792 aa17.16■□□□□ 0.34
TRAF4-214ENST00000580073 SHTN1A0MZ66 631 aa17.16■□□□□ 0.34
TRAF4-214ENST00000580073 VIL1P09327 827 aaKnown RBP17.16■□□□□ 0.34
TRAF4-214ENST00000580073 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
TRAF4-214ENST00000580073 SAGE1Q9NXZ1 904 aa17.16■□□□□ 0.34
TRAF4-214ENST00000580073 GGA3Q9NZ52 723 aa17.16■□□□□ 0.34
TRAF4-214ENST00000580073 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
TRAF4-214ENST00000580073 CCER2I3L3R5 266 aa17.15■□□□□ 0.34
TRAF4-214ENST00000580073 RSBN1LQ6PCB5 846 aaPredicted RBP17.15■□□□□ 0.34
TRAF4-214ENST00000580073 REM2Q8IYK8 340 aaPredicted RBP17.15■□□□□ 0.34
TRAF4-214ENST00000580073 PITPNM2Q9BZ72 1349 aa17.15■□□□□ 0.34
TRAF4-214ENST00000580073 CCDC85CA6NKD9 419 aa17.14■□□□□ 0.33
TRAF4-214ENST00000580073 ELL2O00472 640 aaPredicted RBP17.14■□□□□ 0.33
TRAF4-214ENST00000580073 CTSWP56202 376 aa17.14■□□□□ 0.33
TRAF4-214ENST00000580073 RBM26Q5T8P6 1007 aaKnown RBP17.14■□□□□ 0.33
TRAF4-214ENST00000580073 PODNQ7Z5L7 613 aa17.14■□□□□ 0.33
TRAF4-214ENST00000580073 FAM9BQ8IZU0 186 aa17.14■□□□□ 0.33
TRAF4-214ENST00000580073 SEC31BQ9NQW1 1179 aa17.14■□□□□ 0.33
TRAF4-214ENST00000580073 TSKSQ9UJT2 592 aa17.14■□□□□ 0.33
TRAF4-214ENST00000580073 MYO3BQ8WXR4 1341 aa17.14■□□□□ 0.33
TRAF4-214ENST00000580073 ADM5C9JUS6 153 aa17.13■□□□□ 0.33
TRAF4-214ENST00000580073 MMP14P50281 582 aa17.13■□□□□ 0.33
TRAF4-214ENST00000580073 ZNF157P51786 506 aaPredicted RBP17.13■□□□□ 0.33
TRAF4-214ENST00000580073 FKBP1BP68106 108 aa17.13■□□□□ 0.33
TRAF4-214ENST00000580073 KSR2Q6VAB6 950 aa17.13■□□□□ 0.33
TRAF4-214ENST00000580073 MAP3K2Q9Y2U5 619 aa17.13■□□□□ 0.33
TRAF4-214ENST00000580073 ZNF280AP59817 542 aaPredicted RBP17.12■□□□□ 0.33
TRAF4-214ENST00000580073 USP17L3A6NCW0 530 aa17.11■□□□□ 0.33
TRAF4-214ENST00000580073 USP17L4A6NCW7 530 aa17.11■□□□□ 0.33
TRAF4-214ENST00000580073 EGFRP00533 1210 aa17.11■□□□□ 0.33
TRAF4-214ENST00000580073 USP17L8P0C7I0 530 aa17.11■□□□□ 0.33
TRAF4-214ENST00000580073 MLLT1Q03111 559 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-214ENST00000580073 FAM161AQ3B820 660 aa17.11■□□□□ 0.33
TRAF4-214ENST00000580073 USP17L1Q7RTZ2 530 aa17.11■□□□□ 0.33
TRAF4-214ENST00000580073 C8orf58Q8NAV2 365 aa17.11■□□□□ 0.33
TRAF4-214ENST00000580073 CDCA5Q96FF9 252 aa17.11■□□□□ 0.33
TRAF4-214ENST00000580073 BSDC1Q9NW68 430 aaPredicted RBP17.11■□□□□ 0.33
TRAF4-214ENST00000580073 SLC10A3P09131 477 aa17.1■□□□□ 0.33
TRAF4-214ENST00000580073 IGHMBP2P38935 993 aaKnown RBP17.1■□□□□ 0.33
TRAF4-214ENST00000580073 DGKZQ13574 1117 aa17.1■□□□□ 0.33
TRAF4-214ENST00000580073 CCDC27Q2M243 656 aa17.1■□□□□ 0.33
TRAF4-214ENST00000580073 OGFOD1Q8N543 542 aa17.1■□□□□ 0.33
TRAF4-214ENST00000580073 CCDC85AQ96PX6 553 aaPredicted RBP17.1■□□□□ 0.33
TRAF4-214ENST00000580073 MCOLN1Q9GZU1 580 aa17.1■□□□□ 0.33
TRAF4-214ENST00000580073 MYH16Q9H6N6 1097 aa17.1■□□□□ 0.33
TRAF4-214ENST00000580073 MYOZ2Q9NPC6 264 aa17.1■□□□□ 0.33
TRAF4-214ENST00000580073 LAMB1P07942 1786 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms