RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 ZNF646O15015 1829 aaPredicted RBP8.36□□□□□ -1.07
UBB-208ENST00000578706 MUC3AQ02505 3323 aa8.36□□□□□ -1.07
UBB-208ENST00000578706 WTIPA6NIX2 430 aaPredicted RBP8.35□□□□□ -1.07
UBB-208ENST00000578706 IGF2BP3O00425 579 aaKnown RBP eCLIP8.35□□□□□ -1.07
UBB-208ENST00000578706 RPS12P25398 132 aaKnown RBP8.35□□□□□ -1.07
UBB-208ENST00000578706 SREBF2Q12772 1141 aa8.35□□□□□ -1.07
UBB-208ENST00000578706 TMEM106CQ9BVX2 250 aa8.35□□□□□ -1.07
UBB-208ENST00000578706 ERBB4Q15303 1308 aa8.34□□□□□ -1.07
UBB-208ENST00000578706 CCER2I3L3R5 266 aa8.34□□□□□ -1.07
UBB-208ENST00000578706 ZNF280AP59817 542 aaPredicted RBP8.34□□□□□ -1.07
UBB-208ENST00000578706 PTPN12Q05209 780 aaKnown RBP8.34□□□□□ -1.07
UBB-208ENST00000578706 SCARF1Q14162 830 aa8.34□□□□□ -1.07
UBB-208ENST00000578706 TTLL7Q6ZT98 887 aa8.34□□□□□ -1.07
UBB-208ENST00000578706 Q7L0L9 218 aa8.34□□□□□ -1.07
UBB-208ENST00000578706 UBE2Q1Q7Z7E8 422 aa8.34□□□□□ -1.07
UBB-208ENST00000578706 IFNL1Q8IU54 200 aa8.34□□□□□ -1.07
UBB-208ENST00000578706 ZNF34Q8IZ26 560 aa8.34□□□□□ -1.07
UBB-208ENST00000578706 YTHDC1Q96MU7 727 aaKnown RBP8.34□□□□□ -1.07
UBB-208ENST00000578706 PRUNE2Q8WUY3 3088 aa8.34□□□□□ -1.07
UBB-208ENST00000578706 MAP3K15Q6ZN16 1313 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 ALPK3Q96L96 1907 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 BTBD11A6QL63 1104 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 GNAT3A8MTJ3 354 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 ERVV-1B6SEH8 477 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 ANP32CO43423 234 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 ECE2O60344 883 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 MYCP01106 439 aaPredicted RBP8.33□□□□□ -1.08
UBB-208ENST00000578706 SNRPA1P09661 255 aaKnown RBP8.33□□□□□ -1.08
UBB-208ENST00000578706 SPRYD7Q5W111 196 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 ERO1AQ96HE7 468 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 EFCC1Q9HA90 598 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 PRDM6Q9NQX0 595 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 STXBP5LQ9Y2K9 1186 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 KNSTRNQ9Y448 316 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 PTCH2Q9Y6C5 1203 aa8.33□□□□□ -1.08
UBB-208ENST00000578706 A0A1W2PPC1 479 aa8.32□□□□□ -1.08
UBB-208ENST00000578706 BBOX1O75936 387 aa8.32□□□□□ -1.08
UBB-208ENST00000578706 ALDH1A1P00352 501 aa8.32□□□□□ -1.08
UBB-208ENST00000578706 VIL1P09327 827 aaKnown RBP8.32□□□□□ -1.08
UBB-208ENST00000578706 CRHR2Q13324 411 aa8.32□□□□□ -1.08
UBB-208ENST00000578706 SLC10A5Q5PT55 438 aa8.32□□□□□ -1.08
UBB-208ENST00000578706 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.32□□□□□ -1.08
UBB-208ENST00000578706 TMX4Q9H1E5 349 aaPredicted RBP8.32□□□□□ -1.08
UBB-208ENST00000578706 POLLQ9UGP5 575 aa8.32□□□□□ -1.08
UBB-208ENST00000578706 FZD1Q9UP38 647 aa8.32□□□□□ -1.08
UBB-208ENST00000578706 COL3A1P02461 1466 aaPredicted RBP8.32□□□□□ -1.08
UBB-208ENST00000578706 SSC5DA1L4H1 1573 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 RIMBP2O15034 1052 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 ZBTB7BO15156 539 aaPredicted RBP8.31□□□□□ -1.08
UBB-208ENST00000578706 DIAPH1O60610 1272 aaKnown RBP8.31□□□□□ -1.08
UBB-208ENST00000578706 DOK7Q18PE1 504 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 WASHC4Q2M389 1173 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 SLC4A8Q2Y0W8 1093 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 SLC9C1Q4G0N8 1177 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 LDLRAD1Q5T700 205 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 DEFB123Q8N688 67 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 GAS2L2Q8NHY3 880 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 DPF3Q92784 378 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 NLRP3Q96P20 1036 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 GMLQ99445 158 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 ZBTB3Q9H5J0 574 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 MTMR10Q9NXD2 777 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 RAPGEFL1Q9UHV5 662 aa8.31□□□□□ -1.08
UBB-208ENST00000578706 LAMA2P24043 3122 aaKnown RBP8.31□□□□□ -1.08
UBB-208ENST00000578706 GRAPQ13588 217 aa8.3□□□□□ -1.08
UBB-208ENST00000578706 TTLL12Q14166 644 aaPredicted RBP8.3□□□□□ -1.08
UBB-208ENST00000578706 NGEFQ8N5V2 710 aa8.3□□□□□ -1.08
UBB-208ENST00000578706 GRAPLQ8TC17 118 aaPredicted RBP8.3□□□□□ -1.08
UBB-208ENST00000578706 SH3TC2Q8TF17 1288 aa8.3□□□□□ -1.08
UBB-208ENST00000578706 MANSC4A6NHS7 340 aaPredicted RBP8.29□□□□□ -1.08
UBB-208ENST00000578706 ZBTB22O15209 634 aa8.29□□□□□ -1.08
UBB-208ENST00000578706 HCLS1P14317 486 aaPredicted RBP8.29□□□□□ -1.08
UBB-208ENST00000578706 GPSM2P81274 684 aa8.29□□□□□ -1.08
UBB-208ENST00000578706 SP3Q02447 781 aa8.29□□□□□ -1.08
UBB-208ENST00000578706 PRKG1Q13976 671 aa8.29□□□□□ -1.08
UBB-208ENST00000578706 NBPF9Q3BBW0 867 aa8.29□□□□□ -1.08
UBB-208ENST00000578706 GPR153Q6NV75 609 aa8.29□□□□□ -1.08
UBB-208ENST00000578706 PTPN18Q99952 460 aa8.29□□□□□ -1.08
UBB-208ENST00000578706 MYOZ2Q9NPC6 264 aa8.29□□□□□ -1.08
UBB-208ENST00000578706 OTOFQ9HC10 1997 aa8.29□□□□□ -1.08
UBB-208ENST00000578706 U2SURPO15042 1029 aaKnown RBP8.28□□□□□ -1.08
UBB-208ENST00000578706 COL9A1P20849 921 aa8.28□□□□□ -1.08
UBB-208ENST00000578706 GJA5P36382 358 aa8.28□□□□□ -1.08
UBB-208ENST00000578706 TCIRG1Q13488 830 aa8.28□□□□□ -1.08
UBB-208ENST00000578706 MTFR1Q15390 333 aa8.28□□□□□ -1.08
UBB-208ENST00000578706 GIGYF2Q6Y7W6 1299 aaKnown RBP8.28□□□□□ -1.08
UBB-208ENST00000578706 WNK4Q96J92 1243 aa8.28□□□□□ -1.08
UBB-208ENST00000578706 CLMNQ96JQ2 1002 aa8.28□□□□□ -1.08
UBB-208ENST00000578706 PHACTR3Q96KR7 559 aa8.28□□□□□ -1.08
UBB-208ENST00000578706 STAP2Q9UGK3 403 aa8.28□□□□□ -1.08
UBB-208ENST00000578706 NSFL1CQ9UNZ2 370 aaKnown RBP8.28□□□□□ -1.08
UBB-208ENST00000578706 INHBEP58166 350 aa8.27□□□□□ -1.09
UBB-208ENST00000578706 RSBN1LQ6PCB5 846 aaPredicted RBP8.27□□□□□ -1.09
UBB-208ENST00000578706 PPP1R42Q7Z4L9 355 aa8.27□□□□□ -1.09
UBB-208ENST00000578706 NBPF11Q86T75 865 aa8.27□□□□□ -1.09
UBB-208ENST00000578706 AGBL3Q8NEM8 1001 aa8.27□□□□□ -1.09
UBB-208ENST00000578706 CELF1Q92879 486 aaKnown RBP8.27□□□□□ -1.09
UBB-208ENST00000578706 ARHGAP39Q9C0H5 1083 aa8.27□□□□□ -1.09
UBB-208ENST00000578706 GTF3C3Q9Y5Q9 886 aa8.27□□□□□ -1.09
UBB-208ENST00000578706 C6orf229H3BNL8 230 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms