RNA–Protein interactions for RNA: ENST00000578593.1

DDX42-207, Transcript of DEAD-box helicase 42, humanhuman

TSL 2

Gene DDX42, Length 2,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-207ENST00000578593 C17orf50Q8WW18 174 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 TBC1D5Q92609 795 aa8.7□□□□□ -1.02
DDX42-207ENST00000578593 KIDINS220Q9ULH0 1771 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 FMNL1O95466 1100 aaPredicted RBP8.69□□□□□ -1.02
DDX42-207ENST00000578593 IVLP07476 585 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 MX1P20591 662 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 CPLX2Q6PUV4 134 aaKnown RBP8.69□□□□□ -1.02
DDX42-207ENST00000578593 CCDC125Q86Z20 511 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 PARD3BQ8TEW8 1205 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 BICD1Q96G01 975 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 THUMPD2Q9BTF0 503 aaKnown RBP8.69□□□□□ -1.02
DDX42-207ENST00000578593 GGNBP2Q9H3C7 697 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 EXOC6BQ9Y2D4 811 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 ANKRD26Q9UPS8 1709 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 POLR3GO15318 223 aaPredicted RBP8.69□□□□□ -1.02
DDX42-207ENST00000578593 PYGBP11216 843 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 ACTN2P35609 894 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 PRPHP41219 470 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 HSP90AB2PQ58FF8 381 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 CWC27Q6UX04 472 aaKnown RBP8.69□□□□□ -1.02
DDX42-207ENST00000578593 TRIM42Q8IWZ5 723 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 MRFAP1L1Q96HT8 127 aa8.69□□□□□ -1.02
DDX42-207ENST00000578593 G3BP2Q9UN86 482 aaKnown RBP8.69□□□□□ -1.02
DDX42-207ENST00000578593 USP8P40818 1118 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 ZRSR1Q15695 479 aaKnown RBP8.68□□□□□ -1.02
DDX42-207ENST00000578593 NUTM1Q86Y26 1132 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 ELOA2Q8IYF1 753 aaPredicted RBP8.68□□□□□ -1.02
DDX42-207ENST00000578593 C3orf20Q8ND61 904 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 INTS4Q96HW7 963 aaKnown RBP8.68□□□□□ -1.02
DDX42-207ENST00000578593 MCM8Q9UJA3 840 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 PALD1Q9ULE6 856 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 CNPY2Q9Y2B0 182 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 MCM2P49736 904 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 AKNAD1Q5T1N1 836 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 TMEM132EQ6IEE7 984 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 GIMAP6Q6P9H5 292 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 CDC37L1Q7L3B6 337 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 REXO1L1PQ8IX06 675 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 CCDC112Q8NEF3 446 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 FBXO41Q8TF61 875 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 N4BP2L2Q92802 583 aaPredicted RBP8.68□□□□□ -1.02
DDX42-207ENST00000578593 TMEM165Q9HC07 324 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 PSD3Q9NYI0 1048 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 SIGLEC1Q9BZZ2 1709 aa8.68□□□□□ -1.02
DDX42-207ENST00000578593 TPP2P29144 1249 aaPredicted RBP8.67□□□□□ -1.02
DDX42-207ENST00000578593 RAB27AP51159 221 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 TSNAXIP1Q2TAA8 658 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 TADA2BQ86TJ2 420 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 C16orf45Q96MC5 204 aaPredicted RBP8.67□□□□□ -1.02
DDX42-207ENST00000578593 FUCA2Q9BTY2 467 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 SRCIN1Q9C0H9 1055 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 TMOD4Q9NZQ9 345 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 CAMSAP1Q5T5Y3 1602 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 PNMA6AP0CW24 399 aaPredicted RBP8.67□□□□□ -1.02
DDX42-207ENST00000578593 PTGS1P23219 599 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 HNRNPH1P31943 449 aaKnown RBP8.67□□□□□ -1.02
DDX42-207ENST00000578593 EFCAB2Q5VUJ9 269 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 AK7Q96M32 723 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 WDR33Q9C0J8 1336 aaKnown RBP8.67□□□□□ -1.02
DDX42-207ENST00000578593 ATP10DQ9P241 1426 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 LRRC7Q96NW7 1537 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 RAPGEF3O95398 923 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 PLEKHO1Q53GL0 409 aaPredicted RBP8.67□□□□□ -1.02
DDX42-207ENST00000578593 ANKRD18AQ8IVF6 992 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 TMEM87AQ8NBN3 555 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 RTF1Q92541 710 aaKnown RBP8.67□□□□□ -1.02
DDX42-207ENST00000578593 UPF3BQ9BZI7 483 aaKnown RBP8.67□□□□□ -1.02
DDX42-207ENST00000578593 PDRG1Q9NUG6 133 aa8.67□□□□□ -1.02
DDX42-207ENST00000578593 RPAP1Q9BWH6 1393 aaPredicted RBP8.66□□□□□ -1.02
DDX42-207ENST00000578593 DIAPH1O60610 1272 aaKnown RBP8.66□□□□□ -1.02
DDX42-207ENST00000578593 RDXP35241 583 aaKnown RBP8.66□□□□□ -1.02
DDX42-207ENST00000578593 ZBED6P86452 979 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 ANKRD44Q8N8A2 993 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 JPH2Q9BR39 696 aaPredicted RBP8.66□□□□□ -1.02
DDX42-207ENST00000578593 AKAP2Q9Y2D5 859 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 RTL1A6NKG5 1358 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 NPM3O75607 178 aaKnown RBP8.66□□□□□ -1.02
DDX42-207ENST00000578593 ZRANB2O95218 330 aaKnown RBP eCLIP8.66□□□□□ -1.02
DDX42-207ENST00000578593 FAM200BP0CF97 657 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 ZNF24P17028 368 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 PRKAR2BP31323 418 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 USP4Q13107 963 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 IQCF2Q8IXL9 164 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 UBXN6Q9BZV1 441 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 API5Q9BZZ5 524 aaKnown RBP8.66□□□□□ -1.02
DDX42-207ENST00000578593 KIF9Q9HAQ2 790 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 CABP2Q9NPB3 220 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 UTP6Q9NYH9 597 aaKnown RBP8.66□□□□□ -1.02
DDX42-207ENST00000578593 LMTK2Q8IWU2 1503 aa8.66□□□□□ -1.02
DDX42-207ENST00000578593 A0A087WUV0 522 aaPredicted RBP8.65□□□□□ -1.02
DDX42-207ENST00000578593 FIBPO43427 364 aa8.65□□□□□ -1.02
DDX42-207ENST00000578593 HTATSF1O43719 755 aaKnown RBP8.65□□□□□ -1.02
DDX42-207ENST00000578593 KIF4AO95239 1232 aa8.65□□□□□ -1.02
DDX42-207ENST00000578593 MYL1P05976 194 aa8.65□□□□□ -1.02
DDX42-207ENST00000578593 UBE2HP62256 183 aa8.65□□□□□ -1.02
DDX42-207ENST00000578593 SLC7A5Q01650 507 aa8.65□□□□□ -1.02
DDX42-207ENST00000578593 LRMPQ12912 555 aa8.65□□□□□ -1.02
DDX42-207ENST00000578593 INF2Q27J81 1249 aa8.65□□□□□ -1.02
DDX42-207ENST00000578593 TWISTNBQ3B726 338 aaPredicted RBP8.65□□□□□ -1.02
DDX42-207ENST00000578593 TAX1BP1Q86VP1 789 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms