RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-208ENST00000578525 CDHR2Q9BYE9 1310 aa11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 A0A1B0GUL7 405 aa11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 VPS37CA5D8V6 355 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 LETM1O95202 739 aaPredicted RBP11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 STARD3NLO95772 234 aa11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 IFIT1P09914 478 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 CCDC57Q2TAC2 916 aa11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 HSP90AB3PQ58FF7 597 aa11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 LARP1BQ659C4 914 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 PDLIM2Q96JY6 352 aa11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 SEC62Q99442 399 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 PUS3Q9BZE2 481 aaKnown RBP11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 ASAP1Q9ULH1 1129 aa11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 AKAP2Q9Y2D5 859 aa11.11□□□□□ -0.63
CDK5RAP3-208ENST00000578525 COL16A1Q07092 1604 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 AHDC1Q5TGY3 1603 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 RNF113AO15541 343 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 FIBPO43427 364 aa11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 CSF1RP07333 972 aa11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 TIMM10P62072 90 aa11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 COL9A3Q14050 684 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 LRRFIP1Q32MZ4 808 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 HS1BP3Q53T59 392 aa11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 GIGYF2Q6Y7W6 1299 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 ZBTB38Q8NAP3 1195 aaPredicted RBP11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 TCEANC2Q96MN5 208 aa11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 BTG4Q9NY30 223 aa11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 CCDC9Q9Y3X0 531 aaKnown RBP11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 ABCC12Q96J65 1359 aa11.1□□□□□ -0.63
CDK5RAP3-208ENST00000578525 BCL9O00512 1426 aa11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 RIC1Q4ADV7 1423 aa11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 CHGBP05060 677 aa11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 CYP21A2P08686 494 aa11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 HMGB1P09429 215 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 DNM1Q05193 864 aaKnown RBP11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 CCDC158Q5M9N0 1113 aa11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 TTC39AQ5SRH9 613 aa11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 Q6ZUG5 572 aa11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 GTF3C6Q969F1 213 aa11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 ZNF330Q9Y3S2 320 aaPredicted RBP11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 MAST3O60307 1309 aa11.09□□□□□ -0.63
CDK5RAP3-208ENST00000578525 LAMA4Q16363 1823 aa11.08□□□□□ -0.64
CDK5RAP3-208ENST00000578525 CYP19A1P11511 503 aaPredicted RBP11.08□□□□□ -0.64
CDK5RAP3-208ENST00000578525 HSP90B1P14625 803 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-208ENST00000578525 KRT85P78386 507 aa11.08□□□□□ -0.64
CDK5RAP3-208ENST00000578525 IFIT5Q13325 482 aaKnown RBP11.08□□□□□ -0.64
CDK5RAP3-208ENST00000578525 UVSSAQ2YD98 709 aa11.08□□□□□ -0.64
CDK5RAP3-208ENST00000578525 TAF7LQ5H9L4 462 aa11.08□□□□□ -0.64
CDK5RAP3-208ENST00000578525 STOX1Q6ZVD7 989 aa11.08□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ZSCAN30Q86W11 494 aa11.08□□□□□ -0.64
CDK5RAP3-208ENST00000578525 LRP5O75197 1615 aa11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ZFYP08048 801 aaPredicted RBP11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ADORA1P30542 326 aa11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 STK3Q13188 491 aa11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 GORABQ5T7V8 394 aa11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 CDC37L1Q7L3B6 337 aa11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 DHX32Q7L7V1 743 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 NLRP10Q86W26 655 aa11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 FAM184AQ8NB25 1140 aa11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 FAM89AQ96GI7 184 aa11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 XAGE2Q96GT9 111 aa11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 LLPHQ9BRT6 129 aaKnown RBP11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ROBO1Q9Y6N7 1651 aa11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ELP1O95163 1332 aa11.07□□□□□ -0.64
CDK5RAP3-208ENST00000578525 DOT1LQ8TEK3 1739 aa11.06□□□□□ -0.64
CDK5RAP3-208ENST00000578525 TCHHQ07283 1943 aa11.06□□□□□ -0.64
CDK5RAP3-208ENST00000578525 M0R2C6 588 aa11.06□□□□□ -0.64
CDK5RAP3-208ENST00000578525 PFKFB2O60825 505 aa11.06□□□□□ -0.64
CDK5RAP3-208ENST00000578525 HSPD1P10809 573 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-208ENST00000578525 CTSWP56202 376 aa11.06□□□□□ -0.64
CDK5RAP3-208ENST00000578525 EXOSC10Q01780 885 aaKnown RBP11.06□□□□□ -0.64
CDK5RAP3-208ENST00000578525 HLFQ16534 295 aa11.06□□□□□ -0.64
CDK5RAP3-208ENST00000578525 RNF214Q8ND24 703 aa11.06□□□□□ -0.64
CDK5RAP3-208ENST00000578525 SMARCC2Q8TAQ2 1214 aa11.06□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ANKRD18BA2A2Z9 1011 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ERVV-1B6SEH8 477 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 EXOC5O00471 708 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 DTNBO60941 627 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 FGD1P98174 961 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 RESTQ13127 1097 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ATP2B3Q16720 1220 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 SLFNL1Q499Z3 407 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 TTC6Q86TZ1 520 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 BRF1Q92994 677 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 CHMP4CQ96CF2 233 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 SLC4A9Q96Q91 983 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 AGXT2Q9BYV1 514 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 CCDC39Q9UFE4 941 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 CTNNA3Q9UI47 895 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ZBTB1Q9Y2K1 713 aa11.05□□□□□ -0.64
CDK5RAP3-208ENST00000578525 RREB1Q92766 1687 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 NRAPQ86VF7 1730 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 ARAP2Q8WZ64 1704 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 MYH3P11055 1940 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 E7EWF7 191 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 JAK2O60674 1132 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 GPTP24298 496 aa11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 MSNP26038 577 aaKnown RBP11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 IL6STP40189 918 aaPredicted RBP11.04□□□□□ -0.64
CDK5RAP3-208ENST00000578525 HMGN5P82970 282 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms