RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 FLIIQ13045 1269 aa17.84■□□□□ 0.45
PSMD11-207ENST00000578397 FAM9BQ8IZU0 186 aa17.84■□□□□ 0.45
PSMD11-207ENST00000578397 TBC1D16Q8TBP0 767 aa17.84■□□□□ 0.45
PSMD11-207ENST00000578397 MKRN1Q9UHC7 482 aaKnown RBP17.84■□□□□ 0.45
PSMD11-207ENST00000578397 CTSWP56202 376 aa17.83■□□□□ 0.44
PSMD11-207ENST00000578397 ANKRD18AQ8IVF6 992 aa17.83■□□□□ 0.44
PSMD11-207ENST00000578397 MYH16Q9H6N6 1097 aa17.83■□□□□ 0.44
PSMD11-207ENST00000578397 LTBP1Q14766 1721 aa17.83■□□□□ 0.44
PSMD11-207ENST00000578397 TAF1P21675 1872 aa17.82■□□□□ 0.44
PSMD11-207ENST00000578397 RIMBP2O15034 1052 aa17.82■□□□□ 0.44
PSMD11-207ENST00000578397 EXOSC9Q06265 439 aaKnown RBP17.82■□□□□ 0.44
PSMD11-207ENST00000578397 FKBP5Q13451 457 aaPredicted RBP17.82■□□□□ 0.44
PSMD11-207ENST00000578397 CWF19L2Q2TBE0 894 aaKnown RBP17.82■□□□□ 0.44
PSMD11-207ENST00000578397 CDC5LQ99459 802 aaKnown RBP17.82■□□□□ 0.44
PSMD11-207ENST00000578397 ZC3H12CQ9C0D7 883 aaKnown RBP17.82■□□□□ 0.44
PSMD11-207ENST00000578397 ANKIB1Q9P2G1 1089 aa17.82■□□□□ 0.44
PSMD11-207ENST00000578397 H7C1D1 291 aa17.81■□□□□ 0.44
PSMD11-207ENST00000578397 H7C1W4 665 aa17.81■□□□□ 0.44
PSMD11-207ENST00000578397 HSPA1AP0DMV8 641 aaKnown RBP17.81■□□□□ 0.44
PSMD11-207ENST00000578397 HSPA1BP0DMV9 641 aaKnown RBP17.81■□□□□ 0.44
PSMD11-207ENST00000578397 TTLL11Q8NHH1 800 aa17.81■□□□□ 0.44
PSMD11-207ENST00000578397 ZC3H15Q8WU90 426 aaKnown RBP17.81■□□□□ 0.44
PSMD11-207ENST00000578397 DNAAF4Q8WXU2 420 aa17.81■□□□□ 0.44
PSMD11-207ENST00000578397 DPF2Q92785 391 aa17.81■□□□□ 0.44
PSMD11-207ENST00000578397 CCDC85AQ96PX6 553 aaPredicted RBP17.81■□□□□ 0.44
PSMD11-207ENST00000578397 DBNDD1Q9H9R9 158 aa17.81■□□□□ 0.44
PSMD11-207ENST00000578397 CNOT7Q9UIV1 285 aaKnown RBP17.81■□□□□ 0.44
PSMD11-207ENST00000578397 GGA1Q9UJY5 639 aa17.81■□□□□ 0.44
PSMD11-207ENST00000578397 RTL9Q8NET4 1388 aa17.8■□□□□ 0.44
PSMD11-207ENST00000578397 ECE2O60344 883 aa17.8■□□□□ 0.44
PSMD11-207ENST00000578397 UFL1O94874 794 aa17.8■□□□□ 0.44
PSMD11-207ENST00000578397 GCKRQ14397 625 aa17.8■□□□□ 0.44
PSMD11-207ENST00000578397 LINS1Q8NG48 757 aa17.8■□□□□ 0.44
PSMD11-207ENST00000578397 PGAP2Q9UHJ9 254 aa17.8■□□□□ 0.44
PSMD11-207ENST00000578397 COL4A1P02462 1669 aa17.8■□□□□ 0.44
PSMD11-207ENST00000578397 XDHP47989 1333 aa17.79■□□□□ 0.44
PSMD11-207ENST00000578397 RASSF10A6NK89 507 aa17.79■□□□□ 0.44
PSMD11-207ENST00000578397 PSMD14O00487 310 aa17.79■□□□□ 0.44
PSMD11-207ENST00000578397 RPS12P25398 132 aaKnown RBP17.79■□□□□ 0.44
PSMD11-207ENST00000578397 UBE3BQ7Z3V4 1068 aa17.79■□□□□ 0.44
PSMD11-207ENST00000578397 PLA2G12BQ9BX93 195 aa17.79■□□□□ 0.44
PSMD11-207ENST00000578397 BSDC1Q9NW68 430 aaPredicted RBP17.79■□□□□ 0.44
PSMD11-207ENST00000578397 G3V3G9 751 aa17.78■□□□□ 0.44
PSMD11-207ENST00000578397 ATP2B4P23634 1241 aa17.78■□□□□ 0.44
PSMD11-207ENST00000578397 DOK7Q18PE1 504 aa17.78■□□□□ 0.44
PSMD11-207ENST00000578397 DEFB115Q30KQ5 88 aa17.78■□□□□ 0.44
PSMD11-207ENST00000578397 DCAF8Q5TAQ9 597 aa17.78■□□□□ 0.44
PSMD11-207ENST00000578397 MICALL2Q8IY33 904 aa17.78■□□□□ 0.44
PSMD11-207ENST00000578397 GPR101Q96P66 508 aaPredicted RBP17.78■□□□□ 0.44
PSMD11-207ENST00000578397 GREM2Q9H772 168 aa17.78■□□□□ 0.44
PSMD11-207ENST00000578397 VEGFBP49765 207 aa17.77■□□□□ 0.44
PSMD11-207ENST00000578397 HIRAP54198 1017 aaPredicted RBP17.77■□□□□ 0.44
PSMD11-207ENST00000578397 MKRN4PQ13434 485 aaPredicted RBP17.77■□□□□ 0.44
PSMD11-207ENST00000578397 CHRDL2Q6WN34 429 aa17.77■□□□□ 0.44
PSMD11-207ENST00000578397 ABT1Q9ULW3 272 aaKnown RBP17.77■□□□□ 0.44
PSMD11-207ENST00000578397 TRAF5O00463 557 aa17.76■□□□□ 0.43
PSMD11-207ENST00000578397 VIL1P09327 827 aaKnown RBP17.76■□□□□ 0.43
PSMD11-207ENST00000578397 CASP7P55210 303 aa17.76■□□□□ 0.43
PSMD11-207ENST00000578397 TRPM4Q8TD43 1214 aa17.76■□□□□ 0.43
PSMD11-207ENST00000578397 MINPP1Q9UNW1 487 aa17.76■□□□□ 0.43
PSMD11-207ENST00000578397 PCNTO95613 3336 aa17.76■□□□□ 0.43
PSMD11-207ENST00000578397 CSF1RP07333 972 aa17.75■□□□□ 0.43
PSMD11-207ENST00000578397 CST9Q5W186 159 aa17.75■□□□□ 0.43
PSMD11-207ENST00000578397 KCNQ5Q9NR82 932 aa17.75■□□□□ 0.43
PSMD11-207ENST00000578397 ZNF521Q96K83 1311 aa17.74■□□□□ 0.43
PSMD11-207ENST00000578397 SHTN1A0MZ66 631 aa17.74■□□□□ 0.43
PSMD11-207ENST00000578397 IGHMBP2P38935 993 aaKnown RBP17.74■□□□□ 0.43
PSMD11-207ENST00000578397 FMR1Q06787 632 aaKnown RBP eCLIP17.74■□□□□ 0.43
PSMD11-207ENST00000578397 COL13A1Q5TAT6 717 aaPredicted RBP17.74■□□□□ 0.43
PSMD11-207ENST00000578397 CDC37L1Q7L3B6 337 aa17.74■□□□□ 0.43
PSMD11-207ENST00000578397 REM2Q8IYK8 340 aaPredicted RBP17.74■□□□□ 0.43
PSMD11-207ENST00000578397 BEND3Q5T5X7 828 aa17.73■□□□□ 0.43
PSMD11-207ENST00000578397 PODNQ7Z5L7 613 aa17.73■□□□□ 0.43
PSMD11-207ENST00000578397 GLIS2Q9BZE0 524 aaPredicted RBP17.73■□□□□ 0.43
PSMD11-207ENST00000578397 CACNA1FO60840 1977 aa17.72■□□□□ 0.43
PSMD11-207ENST00000578397 F6X3S4 739 aa17.72■□□□□ 0.43
PSMD11-207ENST00000578397 ITGA6P23229 1130 aa17.72■□□□□ 0.43
PSMD11-207ENST00000578397 ECE1P42892 770 aa17.72■□□□□ 0.43
PSMD11-207ENST00000578397 TBC1D10BQ4KMP7 808 aaPredicted RBP17.72■□□□□ 0.43
PSMD11-207ENST00000578397 SAMD7Q7Z3H4 446 aa17.72■□□□□ 0.43
PSMD11-207ENST00000578397 AGBL3Q8NEM8 1001 aa17.72■□□□□ 0.43
PSMD11-207ENST00000578397 LEMD3Q9Y2U8 911 aa17.72■□□□□ 0.43
PSMD11-207ENST00000578397 TLL2Q9Y6L7 1015 aa17.72■□□□□ 0.43
PSMD11-207ENST00000578397 WDR33Q9C0J8 1336 aaKnown RBP17.72■□□□□ 0.43
PSMD11-207ENST00000578397 MED23Q9ULK4 1368 aa17.71■□□□□ 0.43
PSMD11-207ENST00000578397 SPDYE2BA6NHP3 402 aa17.71■□□□□ 0.43
PSMD11-207ENST00000578397 CELF2O95319 508 aaKnown RBP17.71■□□□□ 0.43
PSMD11-207ENST00000578397 SPDYE6P0CI01 402 aa17.71■□□□□ 0.43
PSMD11-207ENST00000578397 CCT4P50991 539 aaKnown RBP17.71■□□□□ 0.43
PSMD11-207ENST00000578397 FAM161AQ3B820 660 aa17.71■□□□□ 0.43
PSMD11-207ENST00000578397 SPDYE2Q495Y8 402 aa17.71■□□□□ 0.43
PSMD11-207ENST00000578397 RSBN1LQ6PCB5 846 aaPredicted RBP17.71■□□□□ 0.43
PSMD11-207ENST00000578397 AIDAQ96BJ3 306 aa17.71■□□□□ 0.43
PSMD11-207ENST00000578397 MPHOSPH8Q99549 860 aa17.71■□□□□ 0.43
PSMD11-207ENST00000578397 ANKRD2Q9GZV1 360 aa17.71■□□□□ 0.43
PSMD11-207ENST00000578397 ZNF609O15014 1411 aa17.71■□□□□ 0.43
PSMD11-207ENST00000578397 ANKRD18BA2A2Z9 1011 aa17.7■□□□□ 0.42
PSMD11-207ENST00000578397 USP17L3A6NCW0 530 aa17.7■□□□□ 0.42
PSMD11-207ENST00000578397 USP17L4A6NCW7 530 aa17.7■□□□□ 0.42
PSMD11-207ENST00000578397 USP17L1Q7RTZ2 530 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms