RNA–Protein interactions for RNA: ENST00000578240.1

CTC1-203, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-203ENST00000578240 CCDC152Q4G0S7 254 aa16.11■□□□□ 0.17
CTC1-203ENST00000578240 PDGFDQ9GZP0 370 aaPredicted RBP16.11■□□□□ 0.17
CTC1-203ENST00000578240 KIAA1551Q9HCM1 1747 aa16.1■□□□□ 0.17
CTC1-203ENST00000578240 TPTE2Q6XPS3 522 aa16.1■□□□□ 0.17
CTC1-203ENST00000578240 DBNDD2Q9BQY9 259 aa16.1■□□□□ 0.17
CTC1-203ENST00000578240 GPR108Q9NPR9 543 aa16.1■□□□□ 0.17
CTC1-203ENST00000578240 TBC1D9Q6ZT07 1266 aa16.09■□□□□ 0.17
CTC1-203ENST00000578240 CNBD1Q8NA66 436 aa16.09■□□□□ 0.17
CTC1-203ENST00000578240 ECHDC1Q9NTX5 307 aa16.09■□□□□ 0.17
CTC1-203ENST00000578240 SERPINB2P05120 415 aa16.08■□□□□ 0.17
CTC1-203ENST00000578240 IFIT2P09913 472 aaKnown RBP16.08■□□□□ 0.17
CTC1-203ENST00000578240 HSP90B1P14625 803 aaKnown RBP16.08■□□□□ 0.17
CTC1-203ENST00000578240 TAF7LQ5H9L4 462 aa16.08■□□□□ 0.17
CTC1-203ENST00000578240 LDHAL6AQ6ZMR3 332 aa16.08■□□□□ 0.17
CTC1-203ENST00000578240 MTFR1LQ9H019 292 aa16.08■□□□□ 0.17
CTC1-203ENST00000578240 ATF5Q9Y2D1 282 aaPredicted RBP16.08■□□□□ 0.17
CTC1-203ENST00000578240 A0A1B0GUL7 405 aa16.08■□□□□ 0.16
CTC1-203ENST00000578240 FLAD1Q8NFF5 587 aa16.08■□□□□ 0.16
CTC1-203ENST00000578240 SLC51AQ86UW1 340 aa16.07■□□□□ 0.16
CTC1-203ENST00000578240 CELF1Q92879 486 aaKnown RBP16.07■□□□□ 0.16
CTC1-203ENST00000578240 BRCA1P38398 1863 aaKnown RBP16.06■□□□□ 0.16
CTC1-203ENST00000578240 CDC45O75419 566 aa16.06■□□□□ 0.16
CTC1-203ENST00000578240 GTF2E1P29083 439 aaPredicted RBP16.06■□□□□ 0.16
CTC1-203ENST00000578240 ADORA1P30542 326 aa16.06■□□□□ 0.16
CTC1-203ENST00000578240 TIMM10P62072 90 aa16.06■□□□□ 0.16
CTC1-203ENST00000578240 GLRX3O76003 335 aaKnown RBP16.05■□□□□ 0.16
CTC1-203ENST00000578240 MAP4K4O95819 1239 aaPredicted RBP16.05■□□□□ 0.16
CTC1-203ENST00000578240 CRY2Q49AN0 593 aa16.05■□□□□ 0.16
CTC1-203ENST00000578240 MSL1Q68DK7 614 aa16.05■□□□□ 0.16
CTC1-203ENST00000578240 CNNM1Q9NRU3 951 aa16.05■□□□□ 0.16
CTC1-203ENST00000578240 CEP126Q9P2H0 1117 aa16.05■□□□□ 0.16
CTC1-203ENST00000578240 FGFR2P21802 821 aa16.05■□□□□ 0.16
CTC1-203ENST00000578240 METTL24Q5JXM2 366 aa16.05■□□□□ 0.16
CTC1-203ENST00000578240 NLRP3Q96P20 1036 aa16.05■□□□□ 0.16
CTC1-203ENST00000578240 SLX4Q8IY92 1834 aa16.04■□□□□ 0.16
CTC1-203ENST00000578240 GOLGB1Q14789 3259 aaKnown RBP16.04■□□□□ 0.16
CTC1-203ENST00000578240 MROH5Q6ZUA9 1318 aa16.04■□□□□ 0.16
CTC1-203ENST00000578240 MSH5O43196 834 aa16.04■□□□□ 0.16
CTC1-203ENST00000578240 PDE8BO95263 885 aa16.04■□□□□ 0.16
CTC1-203ENST00000578240 PTGER2P43116 358 aa16.04■□□□□ 0.16
CTC1-203ENST00000578240 NLGN1Q8N2Q7 840 aa16.04■□□□□ 0.16
CTC1-203ENST00000578240 CDC5LQ99459 802 aaKnown RBP16.04■□□□□ 0.16
CTC1-203ENST00000578240 DUOX1Q9NRD9 1551 aa16.03■□□□□ 0.16
CTC1-203ENST00000578240 CHD4Q14839 1912 aa16.03■□□□□ 0.16
CTC1-203ENST00000578240 SNAP23O00161 211 aa16.03■□□□□ 0.16
CTC1-203ENST00000578240 ERC2O15083 957 aa16.03■□□□□ 0.16
CTC1-203ENST00000578240 MMP10P09238 476 aa16.03■□□□□ 0.16
CTC1-203ENST00000578240 ATP5JP18859 108 aa16.03■□□□□ 0.16
CTC1-203ENST00000578240 ATP2B3Q16720 1220 aa16.03■□□□□ 0.16
CTC1-203ENST00000578240 HELBQ8NG08 1087 aaPredicted RBP16.03■□□□□ 0.16
CTC1-203ENST00000578240 SLC16A10Q8TF71 515 aa16.03■□□□□ 0.16
CTC1-203ENST00000578240 GPATCH3Q96I76 525 aa16.03■□□□□ 0.16
CTC1-203ENST00000578240 IL25Q9H293 177 aa16.03■□□□□ 0.16
CTC1-203ENST00000578240 KLRG2A4D1S0 409 aaPredicted RBP16.02■□□□□ 0.16
CTC1-203ENST00000578240 IGHMBP2P38935 993 aaKnown RBP16.02■□□□□ 0.16
CTC1-203ENST00000578240 CHRNDQ07001 517 aa16.02■□□□□ 0.16
CTC1-203ENST00000578240 ANKRD18AQ8IVF6 992 aa16.02■□□□□ 0.16
CTC1-203ENST00000578240 XAGE2Q96GT9 111 aa16.02■□□□□ 0.16
CTC1-203ENST00000578240 MPHOSPH8Q99549 860 aa16.02■□□□□ 0.16
CTC1-203ENST00000578240 NDUFB9Q9Y6M9 179 aa16.02■□□□□ 0.16
CTC1-203ENST00000578240 ZNF646O15015 1829 aaPredicted RBP16.02■□□□□ 0.16
CTC1-203ENST00000578240 TAF5LO75529 589 aa16.02■□□□□ 0.15
CTC1-203ENST00000578240 ST5P78524 1137 aa16.02■□□□□ 0.15
CTC1-203ENST00000578240 EDC3Q96F86 508 aaKnown RBP16.02■□□□□ 0.15
CTC1-203ENST00000578240 NEUROD6Q96NK8 337 aa16.02■□□□□ 0.15
CTC1-203ENST00000578240 BSDC1Q9NW68 430 aaPredicted RBP16.02■□□□□ 0.15
CTC1-203ENST00000578240 MAST2Q6P0Q8 1798 aa16.02■□□□□ 0.15
CTC1-203ENST00000578240 CCDC88AQ3V6T2 1871 aa16.01■□□□□ 0.15
CTC1-203ENST00000578240 WTIPA6NIX2 430 aaPredicted RBP16.01■□□□□ 0.15
CTC1-203ENST00000578240 TRIM6-TRIM34B2RNG4 842 aa16.01■□□□□ 0.15
CTC1-203ENST00000578240 CHMLP26374 656 aa16.01■□□□□ 0.15
CTC1-203ENST00000578240 PUM3Q15397 648 aaKnown RBP16.01■□□□□ 0.15
CTC1-203ENST00000578240 RILPL2Q969X0 211 aa16.01■□□□□ 0.15
CTC1-203ENST00000578240 BOLA2Q9H3K6 86 aa16.01■□□□□ 0.15
CTC1-203ENST00000578240 AKAP2Q9Y2D5 859 aa16.01■□□□□ 0.15
CTC1-203ENST00000578240 COL1A1P02452 1464 aaPredicted RBP16■□□□□ 0.15
CTC1-203ENST00000578240 NPHP1O15259 732 aa16■□□□□ 0.15
CTC1-203ENST00000578240 MFAP1P55081 439 aaKnown RBP16■□□□□ 0.15
CTC1-203ENST00000578240 SCARF1Q14162 830 aa16■□□□□ 0.15
CTC1-203ENST00000578240 SGIP1Q9BQI5 828 aa16■□□□□ 0.15
CTC1-203ENST00000578240 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
CTC1-203ENST00000578240 POLD1P28340 1107 aa15.99■□□□□ 0.15
CTC1-203ENST00000578240 RPS8P62241 208 aaKnown RBP15.99■□□□□ 0.15
CTC1-203ENST00000578240 CNTROBQ8N137 903 aa15.99■□□□□ 0.15
CTC1-203ENST00000578240 HAUS7Q99871 368 aa15.99■□□□□ 0.15
CTC1-203ENST00000578240 MINPP1Q9UNW1 487 aa15.99■□□□□ 0.15
CTC1-203ENST00000578240 C10orf71Q711Q0 1435 aa15.99■□□□□ 0.15
CTC1-203ENST00000578240 GRAPQ13588 217 aa15.99■□□□□ 0.15
CTC1-203ENST00000578240 GRAPLQ8TC17 118 aaPredicted RBP15.99■□□□□ 0.15
CTC1-203ENST00000578240 TBC1D32Q96NH3 1257 aa15.99■□□□□ 0.15
CTC1-203ENST00000578240 DDX46Q7L014 1031 aaKnown RBP15.98■□□□□ 0.15
CTC1-203ENST00000578240 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.98■□□□□ 0.15
CTC1-203ENST00000578240 LPIN2Q92539 896 aa15.98■□□□□ 0.15
CTC1-203ENST00000578240 IRS2Q9Y4H2 1338 aa15.98■□□□□ 0.15
CTC1-203ENST00000578240 LAMA4Q16363 1823 aa15.98■□□□□ 0.15
CTC1-203ENST00000578240 RFX7Q2KHR2 1363 aa15.97■□□□□ 0.15
CTC1-203ENST00000578240 HOXA10P31260 410 aaPredicted RBP15.97■□□□□ 0.15
CTC1-203ENST00000578240 PHKA1P46020 1223 aa15.97■□□□□ 0.15
CTC1-203ENST00000578240 PI16Q6UXB8 463 aa15.97■□□□□ 0.15
CTC1-203ENST00000578240 EVI5LQ96CN4 794 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms