RNA–Protein interactions for RNA: ENST00000577686.1

SMARCD2-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 394 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-205ENST00000577686 SULF1Q8IWU6 871 aa18.34■□□□□ 0.53
SMARCD2-205ENST00000577686 CCDC191Q8NCU4 936 aa18.34■□□□□ 0.53
SMARCD2-205ENST00000577686 TBC1D16Q8TBP0 767 aa18.34■□□□□ 0.53
SMARCD2-205ENST00000577686 PODXL2Q9NZ53 605 aa18.34■□□□□ 0.53
SMARCD2-205ENST00000577686 GGA1Q9UJY5 639 aa18.34■□□□□ 0.53
SMARCD2-205ENST00000577686 UFL1O94874 794 aa18.33■□□□□ 0.52
SMARCD2-205ENST00000577686 TBC1D10BQ4KMP7 808 aaPredicted RBP18.33■□□□□ 0.52
SMARCD2-205ENST00000577686 CCDC102AQ96A19 550 aa18.33■□□□□ 0.52
SMARCD2-205ENST00000577686 ZNF428Q96B54 188 aa18.33■□□□□ 0.52
SMARCD2-205ENST00000577686 GBA2Q9HCG7 927 aaPredicted RBP18.33■□□□□ 0.52
SMARCD2-205ENST00000577686 CWC25Q9NXE8 425 aaPredicted RBP18.33■□□□□ 0.52
SMARCD2-205ENST00000577686 POLLQ9UGP5 575 aa18.33■□□□□ 0.52
SMARCD2-205ENST00000577686 CCDC85CA6NKD9 419 aa18.32■□□□□ 0.52
SMARCD2-205ENST00000577686 PDE8AO60658 829 aa18.32■□□□□ 0.52
SMARCD2-205ENST00000577686 PCCAP05165 728 aaPredicted RBP18.32■□□□□ 0.52
SMARCD2-205ENST00000577686 DOK7Q18PE1 504 aa18.32■□□□□ 0.52
SMARCD2-205ENST00000577686 KIF4BQ2VIQ3 1234 aa18.32■□□□□ 0.52
SMARCD2-205ENST00000577686 CCDC30Q5VVM6 783 aa18.32■□□□□ 0.52
SMARCD2-205ENST00000577686 SAMD7Q7Z3H4 446 aa18.32■□□□□ 0.52
SMARCD2-205ENST00000577686 MYD88Q99836 296 aa18.32■□□□□ 0.52
SMARCD2-205ENST00000577686 RBM26Q5T8P6 1007 aaKnown RBP18.31■□□□□ 0.52
SMARCD2-205ENST00000577686 RGMBQ6NW40 437 aa18.31■□□□□ 0.52
SMARCD2-205ENST00000577686 ANKRD18AQ8IVF6 992 aa18.31■□□□□ 0.52
SMARCD2-205ENST00000577686 XDHP47989 1333 aa18.3■□□□□ 0.52
SMARCD2-205ENST00000577686 ZNF853P0CG23 659 aa18.3■□□□□ 0.52
SMARCD2-205ENST00000577686 NEXNQ0ZGT2 675 aa18.3■□□□□ 0.52
SMARCD2-205ENST00000577686 AGBL3Q8NEM8 1001 aa18.3■□□□□ 0.52
SMARCD2-205ENST00000577686 CDC5LQ99459 802 aaKnown RBP18.3■□□□□ 0.52
SMARCD2-205ENST00000577686 TSKSQ9UJT2 592 aa18.3■□□□□ 0.52
SMARCD2-205ENST00000577686 SHTN1A0MZ66 631 aa18.29■□□□□ 0.52
SMARCD2-205ENST00000577686 VIL1P09327 827 aaKnown RBP18.29■□□□□ 0.52
SMARCD2-205ENST00000577686 PRKRIP1Q9H875 184 aaPredicted RBP18.29■□□□□ 0.52
SMARCD2-205ENST00000577686 SAGE1Q9NXZ1 904 aa18.29■□□□□ 0.52
SMARCD2-205ENST00000577686 ZNF609O15014 1411 aa18.29■□□□□ 0.52
SMARCD2-205ENST00000577686 RTL9Q8NET4 1388 aa18.29■□□□□ 0.52
SMARCD2-205ENST00000577686 APAF1O14727 1248 aa18.28■□□□□ 0.52
SMARCD2-205ENST00000577686 ATP2B4P23634 1241 aa18.28■□□□□ 0.52
SMARCD2-205ENST00000577686 MLLT1Q03111 559 aaPredicted RBP18.28■□□□□ 0.52
SMARCD2-205ENST00000577686 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
SMARCD2-205ENST00000577686 METTL22Q9BUU2 404 aaPredicted RBP18.28■□□□□ 0.52
SMARCD2-205ENST00000577686 STK31Q9BXU1 1019 aa18.28■□□□□ 0.52
SMARCD2-205ENST00000577686 PHAXQ9H814 394 aaKnown RBP18.28■□□□□ 0.52
SMARCD2-205ENST00000577686 GGA3Q9NZ52 723 aa18.28■□□□□ 0.52
SMARCD2-205ENST00000577686 ELL2O00472 640 aaPredicted RBP18.27■□□□□ 0.52
SMARCD2-205ENST00000577686 ZNF157P51786 506 aaPredicted RBP18.27■□□□□ 0.52
SMARCD2-205ENST00000577686 RSBN1LQ6PCB5 846 aaPredicted RBP18.27■□□□□ 0.52
SMARCD2-205ENST00000577686 SEC31BQ9NQW1 1179 aa18.27■□□□□ 0.52
SMARCD2-205ENST00000577686 ADM5C9JUS6 153 aa18.26■□□□□ 0.51
SMARCD2-205ENST00000577686 FKBP1BP68106 108 aa18.26■□□□□ 0.51
SMARCD2-205ENST00000577686 DGKZQ13574 1117 aa18.26■□□□□ 0.51
SMARCD2-205ENST00000577686 FAM161AQ3B820 660 aa18.26■□□□□ 0.51
SMARCD2-205ENST00000577686 PODNQ7Z5L7 613 aa18.26■□□□□ 0.51
SMARCD2-205ENST00000577686 MCOLN1Q9GZU1 580 aa18.26■□□□□ 0.51
SMARCD2-205ENST00000577686 TAF1P21675 1872 aa18.25■□□□□ 0.51
SMARCD2-205ENST00000577686 ZNF280AP59817 542 aaPredicted RBP18.25■□□□□ 0.51
SMARCD2-205ENST00000577686 PITPNM2Q9BZ72 1349 aa18.24■□□□□ 0.51
SMARCD2-205ENST00000577686 USP17L3A6NCW0 530 aa18.24■□□□□ 0.51
SMARCD2-205ENST00000577686 USP17L4A6NCW7 530 aa18.24■□□□□ 0.51
SMARCD2-205ENST00000577686 USP17L8P0C7I0 530 aa18.24■□□□□ 0.51
SMARCD2-205ENST00000577686 MMP14P50281 582 aa18.24■□□□□ 0.51
SMARCD2-205ENST00000577686 CTSWP56202 376 aa18.24■□□□□ 0.51
SMARCD2-205ENST00000577686 KSR2Q6VAB6 950 aa18.24■□□□□ 0.51
SMARCD2-205ENST00000577686 USP17L1Q7RTZ2 530 aa18.24■□□□□ 0.51
SMARCD2-205ENST00000577686 MAP3K2Q9Y2U5 619 aa18.24■□□□□ 0.51
SMARCD2-205ENST00000577686 MYO3BQ8WXR4 1341 aa18.23■□□□□ 0.51
SMARCD2-205ENST00000577686 EGFRP00533 1210 aa18.23■□□□□ 0.51
SMARCD2-205ENST00000577686 ANGEL2Q5VTE6 544 aaKnown RBP18.23■□□□□ 0.51
SMARCD2-205ENST00000577686 OGFOD1Q8N543 542 aa18.23■□□□□ 0.51
SMARCD2-205ENST00000577686 CDCA5Q96FF9 252 aa18.23■□□□□ 0.51
SMARCD2-205ENST00000577686 CCDC85AQ96PX6 553 aaPredicted RBP18.23■□□□□ 0.51
SMARCD2-205ENST00000577686 KCNQ5Q9NR82 932 aa18.23■□□□□ 0.51
SMARCD2-205ENST00000577686 MED23Q9ULK4 1368 aa18.22■□□□□ 0.51
SMARCD2-205ENST00000577686 SLC10A3P09131 477 aa18.22■□□□□ 0.51
SMARCD2-205ENST00000577686 NF2P35240 595 aa18.22■□□□□ 0.51
SMARCD2-205ENST00000577686 RGS19P49795 217 aa18.22■□□□□ 0.51
SMARCD2-205ENST00000577686 KIF23Q02241 960 aaPredicted RBP18.22■□□□□ 0.51
SMARCD2-205ENST00000577686 SCARF1Q14162 830 aa18.22■□□□□ 0.51
SMARCD2-205ENST00000577686 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
SMARCD2-205ENST00000577686 MYOZ2Q9NPC6 264 aa18.22■□□□□ 0.51
SMARCD2-205ENST00000577686 FAM155AB1AL88 458 aaPredicted RBP18.21■□□□□ 0.51
SMARCD2-205ENST00000577686 IGHMBP2P38935 993 aaKnown RBP18.21■□□□□ 0.51
SMARCD2-205ENST00000577686 BSDC1Q9NW68 430 aaPredicted RBP18.21■□□□□ 0.51
SMARCD2-205ENST00000577686 PI4KAP2A4QPH2 592 aa18.2■□□□□ 0.5
SMARCD2-205ENST00000577686 PI4KAP1Q8N8J0 262 aa18.2■□□□□ 0.5
SMARCD2-205ENST00000577686 FBXW7Q969H0 707 aa18.19■□□□□ 0.5
SMARCD2-205ENST00000577686 ANKRD2Q9GZV1 360 aa18.19■□□□□ 0.5
SMARCD2-205ENST00000577686 COA1Q9GZY4 146 aa18.19■□□□□ 0.5
SMARCD2-205ENST00000577686 MYH16Q9H6N6 1097 aa18.19■□□□□ 0.5
SMARCD2-205ENST00000577686 LEMD3Q9Y2U8 911 aa18.19■□□□□ 0.5
SMARCD2-205ENST00000577686 COL4A1P02462 1669 aa18.18■□□□□ 0.5
SMARCD2-205ENST00000577686 CCT4P50991 539 aaKnown RBP18.18■□□□□ 0.5
SMARCD2-205ENST00000577686 DLK2Q6UY11 383 aa18.18■□□□□ 0.5
SMARCD2-205ENST00000577686 TTLL11Q8NHH1 800 aa18.18■□□□□ 0.5
SMARCD2-205ENST00000577686 JARID2Q92833 1246 aaPredicted RBP18.18■□□□□ 0.5
SMARCD2-205ENST00000577686 RNF186Q9NXI6 227 aa18.18■□□□□ 0.5
SMARCD2-205ENST00000577686 HDAC9Q9UKV0 1011 aa18.18■□□□□ 0.5
SMARCD2-205ENST00000577686 MINPP1Q9UNW1 487 aa18.18■□□□□ 0.5
SMARCD2-205ENST00000577686 PAPPA2Q9BXP8 1791 aa18.17■□□□□ 0.5
SMARCD2-205ENST00000577686 TRPA1O75762 1119 aa18.17■□□□□ 0.5
SMARCD2-205ENST00000577686 TTLL12Q14166 644 aaPredicted RBP18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms