RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 SPEF2Q9C093 1822 aa15.23■□□□□ 0.03
TSEN54-204ENST00000577197 APBB1O00213 710 aa15.23■□□□□ 0.03
TSEN54-204ENST00000577197 TGFB2P61812 414 aa15.23■□□□□ 0.03
TSEN54-204ENST00000577197 TFCP2Q12800 502 aa15.23■□□□□ 0.03
TSEN54-204ENST00000577197 AACSQ86V21 672 aa15.23■□□□□ 0.03
TSEN54-204ENST00000577197 C16orf71Q8IYS4 520 aaPredicted RBP15.23■□□□□ 0.03
TSEN54-204ENST00000577197 KLHDC4Q8TBB5 520 aa15.23■□□□□ 0.03
TSEN54-204ENST00000577197 BSDC1Q9NW68 430 aaPredicted RBP15.23■□□□□ 0.03
TSEN54-204ENST00000577197 KIF13BQ9NQT8 1826 aa15.22■□□□□ 0.03
TSEN54-204ENST00000577197 H0YIN7 160 aa15.22■□□□□ 0.03
TSEN54-204ENST00000577197 GSPT1P15170 499 aaKnown RBP15.22■□□□□ 0.03
TSEN54-204ENST00000577197 TMC4Q7Z404 712 aa15.22■□□□□ 0.03
TSEN54-204ENST00000577197 VGLL2Q8N8G2 317 aa15.22■□□□□ 0.03
TSEN54-204ENST00000577197 PI4K2BQ8TCG2 481 aa15.22■□□□□ 0.03
TSEN54-204ENST00000577197 OTUD7AQ8TE49 926 aaPredicted RBP15.22■□□□□ 0.03
TSEN54-204ENST00000577197 ZNF512BQ96KM6 892 aaPredicted RBP15.22■□□□□ 0.03
TSEN54-204ENST00000577197 MPHOSPH8Q99549 860 aa15.22■□□□□ 0.03
TSEN54-204ENST00000577197 CNNM1Q9NRU3 951 aa15.22■□□□□ 0.03
TSEN54-204ENST00000577197 PPP1R1BQ9UD71 204 aaPredicted RBP15.22■□□□□ 0.03
TSEN54-204ENST00000577197 RFX7Q2KHR2 1363 aa15.22■□□□□ 0.03
TSEN54-204ENST00000577197 TNRC6CQ9HCJ0 1690 aaKnown RBP15.22■□□□□ 0.03
TSEN54-204ENST00000577197 ANKRD31Q8N7Z5 1873 aa15.21■□□□□ 0.03
TSEN54-204ENST00000577197 CDC45O75419 566 aa15.21■□□□□ 0.03
TSEN54-204ENST00000577197 PDE8BO95263 885 aa15.21■□□□□ 0.03
TSEN54-204ENST00000577197 SRGNP10124 158 aa15.21■□□□□ 0.03
TSEN54-204ENST00000577197 ATP5JP18859 108 aa15.21■□□□□ 0.03
TSEN54-204ENST00000577197 HOXA10P31260 410 aaPredicted RBP15.21■□□□□ 0.03
TSEN54-204ENST00000577197 LRRC24Q50LG9 513 aa15.21■□□□□ 0.03
TSEN54-204ENST00000577197 C3orf67Q6ZVT6 689 aa15.21■□□□□ 0.03
TSEN54-204ENST00000577197 ANKRD18AQ8IVF6 992 aa15.21■□□□□ 0.03
TSEN54-204ENST00000577197 EPB41L2O43491 1005 aaKnown RBP15.2■□□□□ 0.02
TSEN54-204ENST00000577197 NPR1P16066 1061 aa15.2■□□□□ 0.02
TSEN54-204ENST00000577197 STYK1Q6J9G0 422 aa15.2■□□□□ 0.02
TSEN54-204ENST00000577197 CASC1Q6TDU7 716 aa15.2■□□□□ 0.02
TSEN54-204ENST00000577197 DDX46Q7L014 1031 aaKnown RBP15.2■□□□□ 0.02
TSEN54-204ENST00000577197 C2CD5Q86YS7 1000 aa15.2■□□□□ 0.02
TSEN54-204ENST00000577197 RPGRQ92834 1020 aaKnown RBP15.2■□□□□ 0.02
TSEN54-204ENST00000577197 MASTLQ96GX5 879 aa15.2■□□□□ 0.02
TSEN54-204ENST00000577197 RBM17Q96I25 401 aaKnown RBP15.2■□□□□ 0.02
TSEN54-204ENST00000577197 ZNF594Q96JF6 807 aaPredicted RBP15.2■□□□□ 0.02
TSEN54-204ENST00000577197 CRAMP1Q96RY5 1269 aa15.2■□□□□ 0.02
TSEN54-204ENST00000577197 TSHZ2Q9NRE2 1034 aa15.2■□□□□ 0.02
TSEN54-204ENST00000577197 A0A1B0GUL6 1792 aa15.2■□□□□ 0.02
TSEN54-204ENST00000577197 SDSP20132 328 aa15.19■□□□□ 0.02
TSEN54-204ENST00000577197 PUM3Q15397 648 aaKnown RBP15.19■□□□□ 0.02
TSEN54-204ENST00000577197 METTL24Q5JXM2 366 aa15.19■□□□□ 0.02
TSEN54-204ENST00000577197 KLHL34Q8N239 644 aa15.19■□□□□ 0.02
TSEN54-204ENST00000577197 LPIN2Q92539 896 aa15.19■□□□□ 0.02
TSEN54-204ENST00000577197 PUS3Q9BZE2 481 aaKnown RBP15.19■□□□□ 0.02
TSEN54-204ENST00000577197 DBNLQ9UJU6 430 aaKnown RBP15.19■□□□□ 0.02
TSEN54-204ENST00000577197 AK9Q5TCS8 1911 aa15.18■□□□□ 0.02
TSEN54-204ENST00000577197 A0A1B0GUL7 405 aa15.18■□□□□ 0.02
TSEN54-204ENST00000577197 FGFR2P21802 821 aa15.18■□□□□ 0.02
TSEN54-204ENST00000577197 ALDH1B1P30837 517 aa15.18■□□□□ 0.02
TSEN54-204ENST00000577197 RPS8P62241 208 aaKnown RBP15.18■□□□□ 0.02
TSEN54-204ENST00000577197 GRAPQ13588 217 aa15.18■□□□□ 0.02
TSEN54-204ENST00000577197 CNTROBQ8N137 903 aa15.18■□□□□ 0.02
TSEN54-204ENST00000577197 GRAPLQ8TC17 118 aaPredicted RBP15.18■□□□□ 0.02
TSEN54-204ENST00000577197 FHDC1Q9C0D6 1143 aaPredicted RBP15.18■□□□□ 0.02
TSEN54-204ENST00000577197 ANKRD2Q9GZV1 360 aa15.18■□□□□ 0.02
TSEN54-204ENST00000577197 SEC31BQ9NQW1 1179 aa15.18■□□□□ 0.02
TSEN54-204ENST00000577197 HIP1O00291 1037 aa15.17■□□□□ 0.02
TSEN54-204ENST00000577197 DPEP1P16444 411 aa15.17■□□□□ 0.02
TSEN54-204ENST00000577197 CHRNA5P30532 468 aa15.17■□□□□ 0.02
TSEN54-204ENST00000577197 UBE4AQ14139 1066 aa15.17■□□□□ 0.02
TSEN54-204ENST00000577197 ATP2B3Q16720 1220 aa15.17■□□□□ 0.02
TSEN54-204ENST00000577197 CNKSR1Q969H4 720 aa15.17■□□□□ 0.02
TSEN54-204ENST00000577197 EVI5LQ96CN4 794 aa15.17■□□□□ 0.02
TSEN54-204ENST00000577197 CCDC85AQ96PX6 553 aaPredicted RBP15.17■□□□□ 0.02
TSEN54-204ENST00000577197 UPF2Q9HAU5 1272 aaKnown RBP15.17■□□□□ 0.02
TSEN54-204ENST00000577197 LRRC37AA6NMS7 1700 aa15.17■□□□□ 0.02
TSEN54-204ENST00000577197 IGSF3O75054 1194 aa15.16■□□□□ 0.02
TSEN54-204ENST00000577197 BBOX1O75936 387 aa15.16■□□□□ 0.02
TSEN54-204ENST00000577197 CCDC158Q5M9N0 1113 aa15.16■□□□□ 0.02
TSEN54-204ENST00000577197 ZNF622Q969S3 477 aaKnown RBP eCLIP15.16■□□□□ 0.02
TSEN54-204ENST00000577197 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.16■□□□□ 0.02
TSEN54-204ENST00000577197 COL11A2P13942 1736 aaPredicted RBP15.16■□□□□ 0.02
TSEN54-204ENST00000577197 KIAA1551Q9HCM1 1747 aa15.15■□□□□ 0.02
TSEN54-204ENST00000577197 A0A0G2JLW4 131 aa15.15■□□□□ 0.02
TSEN54-204ENST00000577197 IFIT1P09914 478 aaKnown RBP15.15■□□□□ 0.02
TSEN54-204ENST00000577197 SLC5A1P13866 664 aa15.15■□□□□ 0.02
TSEN54-204ENST00000577197 KCNA3P22001 575 aa15.15■□□□□ 0.02
TSEN54-204ENST00000577197 TBC1D9Q6ZT07 1266 aa15.15■□□□□ 0.02
TSEN54-204ENST00000577197 HAUS7Q99871 368 aa15.15■□□□□ 0.02
TSEN54-204ENST00000577197 DBNDD2Q9BQY9 259 aa15.15■□□□□ 0.02
TSEN54-204ENST00000577197 SYT17Q9BSW7 474 aa15.15■□□□□ 0.02
TSEN54-204ENST00000577197 CCDC8Q9H0W5 538 aaPredicted RBP15.15■□□□□ 0.02
TSEN54-204ENST00000577197 PIM2Q9P1W9 311 aa15.15■□□□□ 0.02
TSEN54-204ENST00000577197 DLEC1Q9Y238 1755 aa15.15■□□□□ 0.02
TSEN54-204ENST00000577197 UQCRFS1P1P0C7P4 283 aa15.14■□□□□ 0.01
TSEN54-204ENST00000577197 CHRNDQ07001 517 aa15.14■□□□□ 0.01
TSEN54-204ENST00000577197 TTLL6Q8N841 843 aa15.14■□□□□ 0.01
TSEN54-204ENST00000577197 CELF1Q92879 486 aaKnown RBP15.14■□□□□ 0.01
TSEN54-204ENST00000577197 XAGE2Q96GT9 111 aa15.14■□□□□ 0.01
TSEN54-204ENST00000577197 ARID4AP29374 1257 aaPredicted RBP15.13■□□□□ 0.01
TSEN54-204ENST00000577197 LRRFIP1Q32MZ4 808 aaKnown RBP15.13■□□□□ 0.01
TSEN54-204ENST00000577197 TMED8Q6PL24 325 aaPredicted RBP15.13■□□□□ 0.01
TSEN54-204ENST00000577197 C15orf52Q6ZUT6 534 aaKnown RBP15.13■□□□□ 0.01
TSEN54-204ENST00000577197 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
TSEN54-204ENST00000577197 NLGN2Q8NFZ4 835 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms