RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 XDHP47989 1333 aa29.63■■■□□ 2.33
SNF8-217ENST00000576353 COL4A5P29400 1685 aa29.63■■■□□ 2.33
SNF8-217ENST00000576353 IPO8O15397 1037 aaKnown RBP29.62■■■□□ 2.33
SNF8-217ENST00000576353 EPHA10Q5JZY3 1008 aa29.62■■■□□ 2.33
SNF8-217ENST00000576353 MINPP1Q9UNW1 487 aa29.62■■■□□ 2.33
SNF8-217ENST00000576353 UFL1O94874 794 aa29.61■■■□□ 2.33
SNF8-217ENST00000576353 ZC3H12CQ9C0D7 883 aaKnown RBP29.61■■■□□ 2.33
SNF8-217ENST00000576353 WDR90Q96KV7 1748 aa29.61■■■□□ 2.33
SNF8-217ENST00000576353 MYH3P11055 1940 aa29.61■■■□□ 2.33
SNF8-217ENST00000576353 DUOX1Q9NRD9 1551 aa29.6■■■□□ 2.33
SNF8-217ENST00000576353 RIMBP2O15034 1052 aa29.6■■■□□ 2.33
SNF8-217ENST00000576353 ATP2B4P23634 1241 aa29.6■■■□□ 2.33
SNF8-217ENST00000576353 CCDC57Q2TAC2 916 aa29.6■■■□□ 2.33
SNF8-217ENST00000576353 SUCLG2Q96I99 432 aa29.6■■■□□ 2.33
SNF8-217ENST00000576353 USP44Q9H0E7 712 aa29.6■■■□□ 2.33
SNF8-217ENST00000576353 GJA3Q9Y6H8 435 aa29.6■■■□□ 2.33
SNF8-217ENST00000576353 BCAR3O75815 825 aa29.57■■■□□ 2.32
SNF8-217ENST00000576353 CXCL9Q07325 125 aa29.57■■■□□ 2.32
SNF8-217ENST00000576353 KAZALD1Q96I82 304 aa29.57■■■□□ 2.32
SNF8-217ENST00000576353 ANKRD2Q9GZV1 360 aa29.57■■■□□ 2.32
SNF8-217ENST00000576353 HACL1Q9UJ83 578 aa29.57■■■□□ 2.32
SNF8-217ENST00000576353 FSTL1Q12841 308 aa29.56■■■□□ 2.32
SNF8-217ENST00000576353 TNIP1Q15025 636 aa29.56■■■□□ 2.32
SNF8-217ENST00000576353 TAF7LQ5H9L4 462 aa29.56■■■□□ 2.32
SNF8-217ENST00000576353 SMC1BQ8NDV3 1235 aa29.56■■■□□ 2.32
SNF8-217ENST00000576353 G3V3G9 751 aa29.55■■■□□ 2.32
SNF8-217ENST00000576353 DCAF8Q5TAQ9 597 aa29.55■■■□□ 2.32
SNF8-217ENST00000576353 CIAPIN1Q6FI81 312 aa29.55■■■□□ 2.32
SNF8-217ENST00000576353 FRAT1Q92837 279 aaPredicted RBP29.55■■■□□ 2.32
SNF8-217ENST00000576353 GPR101Q96P66 508 aaPredicted RBP29.55■■■□□ 2.32
SNF8-217ENST00000576353 LMOD1P29536 600 aaPredicted RBP29.54■■■□□ 2.32
SNF8-217ENST00000576353 RABL6Q3YEC7 729 aaPredicted RBP29.54■■■□□ 2.32
SNF8-217ENST00000576353 TAF1DQ9H5J8 278 aaPredicted RBP29.54■■■□□ 2.32
SNF8-217ENST00000576353 BICC1Q9H694 974 aaKnown RBP29.54■■■□□ 2.32
SNF8-217ENST00000576353 DBNDD1Q9H9R9 158 aa29.54■■■□□ 2.32
SNF8-217ENST00000576353 LEMD3Q9Y2U8 911 aa29.54■■■□□ 2.32
SNF8-217ENST00000576353 DOK7Q18PE1 504 aa29.53■■■□□ 2.32
SNF8-217ENST00000576353 HDAC5Q9UQL6 1122 aa29.53■■■□□ 2.32
SNF8-217ENST00000576353 LTBP1Q14766 1721 aa29.53■■■□□ 2.32
SNF8-217ENST00000576353 YDJCA8MPS7 323 aa29.52■■■□□ 2.32
SNF8-217ENST00000576353 ECE2O60344 883 aa29.52■■■□□ 2.32
SNF8-217ENST00000576353 RAD17O75943 681 aa29.52■■■□□ 2.32
SNF8-217ENST00000576353 ATF7IPQ6VMQ6 1270 aa29.52■■■□□ 2.32
SNF8-217ENST00000576353 EPHX2P34913 555 aa29.51■■■□□ 2.31
SNF8-217ENST00000576353 CHRNDQ07001 517 aa29.51■■■□□ 2.31
SNF8-217ENST00000576353 INTS3Q68E01 1043 aaKnown RBP29.51■■■□□ 2.31
SNF8-217ENST00000576353 LDHAL6AQ6ZMR3 332 aa29.51■■■□□ 2.31
SNF8-217ENST00000576353 UBTFL1P0CB47 393 aaPredicted RBP29.5■■■□□ 2.31
SNF8-217ENST00000576353 TRIM27P14373 513 aa29.5■■■□□ 2.31
SNF8-217ENST00000576353 PNMA8AQ86V59 439 aaPredicted RBP29.5■■■□□ 2.31
SNF8-217ENST00000576353 ANKRD44Q8N8A2 993 aa29.5■■■□□ 2.31
SNF8-217ENST00000576353 ZNF594Q96JF6 807 aaPredicted RBP29.5■■■□□ 2.31
SNF8-217ENST00000576353 HSPA6P17066 643 aa29.49■■■□□ 2.31
SNF8-217ENST00000576353 SCNN1DP51172 638 aa29.49■■■□□ 2.31
SNF8-217ENST00000576353 ZKSCAN2Q63HK3 967 aa29.49■■■□□ 2.31
SNF8-217ENST00000576353 CNNM1Q9NRU3 951 aa29.49■■■□□ 2.31
SNF8-217ENST00000576353 ZNF804BA4D1E1 1349 aa29.48■■■□□ 2.31
SNF8-217ENST00000576353 KCNJ4P48050 445 aa29.48■■■□□ 2.31
SNF8-217ENST00000576353 MED23Q9ULK4 1368 aa29.48■■■□□ 2.31
SNF8-217ENST00000576353 SCN4AP35499 1836 aa29.48■■■□□ 2.31
SNF8-217ENST00000576353 WTIPA6NIX2 430 aaPredicted RBP29.47■■■□□ 2.31
SNF8-217ENST00000576353 LDHDQ86WU2 507 aa29.47■■■□□ 2.31
SNF8-217ENST00000576353 GMPSP49915 693 aaPredicted RBP29.46■■■□□ 2.31
SNF8-217ENST00000576353 EAPPQ56P03 285 aaPredicted RBP29.46■■■□□ 2.31
SNF8-217ENST00000576353 CHADLQ6NUI6 762 aa29.46■■■□□ 2.31
SNF8-217ENST00000576353 GPRC5DQ9NZD1 345 aa29.46■■■□□ 2.31
SNF8-217ENST00000576353 PSMD14O00487 310 aa29.45■■■□□ 2.31
SNF8-217ENST00000576353 EPS15P42566 896 aa29.45■■■□□ 2.31
SNF8-217ENST00000576353 PODNQ7Z5L7 613 aa29.45■■■□□ 2.31
SNF8-217ENST00000576353 HELBQ8NG08 1087 aaPredicted RBP29.44■■■□□ 2.3
SNF8-217ENST00000576353 CLUAP1Q96AJ1 413 aa29.44■■■□□ 2.3
SNF8-217ENST00000576353 KCNQ5Q9NR82 932 aa29.44■■■□□ 2.3
SNF8-217ENST00000576353 TAF5LO75529 589 aa29.43■■■□□ 2.3
SNF8-217ENST00000576353 GNAI3P08754 354 aa29.43■■■□□ 2.3
SNF8-217ENST00000576353 POTEIP0CG38 1075 aa29.43■■■□□ 2.3
SNF8-217ENST00000576353 POTEJP0CG39 1038 aa29.43■■■□□ 2.3
SNF8-217ENST00000576353 COA1Q9GZY4 146 aa29.43■■■□□ 2.3
SNF8-217ENST00000576353 DPF2Q92785 391 aa29.42■■■□□ 2.3
SNF8-217ENST00000576353 MEIS3Q99687 375 aa29.42■■■□□ 2.3
SNF8-217ENST00000576353 CLEC11AQ9Y240 323 aa29.42■■■□□ 2.3
SNF8-217ENST00000576353 SPEF2Q9C093 1822 aa29.42■■■□□ 2.3
SNF8-217ENST00000576353 RPS12P25398 132 aaKnown RBP29.41■■■□□ 2.3
SNF8-217ENST00000576353 USP50Q70EL3 339 aaPredicted RBP29.41■■■□□ 2.3
SNF8-217ENST00000576353 ADARB2Q9NS39 739 aaKnown RBP29.41■■■□□ 2.3
SNF8-217ENST00000576353 PLIN1O60240 522 aa29.4■■■□□ 2.3
SNF8-217ENST00000576353 VIL1P09327 827 aaKnown RBP29.4■■■□□ 2.3
SNF8-217ENST00000576353 APLP1P51693 650 aa29.4■■■□□ 2.3
SNF8-217ENST00000576353 TXNRD3Q86VQ6 643 aa29.4■■■□□ 2.3
SNF8-217ENST00000576353 PUS3Q9BZE2 481 aaKnown RBP29.4■■■□□ 2.3
SNF8-217ENST00000576353 CNOT7Q9UIV1 285 aaKnown RBP29.4■■■□□ 2.3
SNF8-217ENST00000576353 TNNQ9UQP3 1299 aa29.4■■■□□ 2.3
SNF8-217ENST00000576353 ZBTB12Q9Y330 459 aaPredicted RBP29.4■■■□□ 2.3
SNF8-217ENST00000576353 RIPOR2Q9Y4F9 1068 aa29.4■■■□□ 2.3
SNF8-217ENST00000576353 LRRFIP2Q9Y608 721 aaKnown RBP29.4■■■□□ 2.3
SNF8-217ENST00000576353 MROH5Q6ZUA9 1318 aa29.4■■■□□ 2.3
SNF8-217ENST00000576353 H7C1D1 291 aa29.39■■■□□ 2.3
SNF8-217ENST00000576353 C15orf52Q6ZUT6 534 aaKnown RBP29.39■■■□□ 2.3
SNF8-217ENST00000576353 USP17L3A6NCW0 530 aa29.38■■■□□ 2.29
SNF8-217ENST00000576353 USP17L4A6NCW7 530 aa29.38■■■□□ 2.29
SNF8-217ENST00000576353 USP17L1Q7RTZ2 530 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms