RNA–Protein interactions for RNA: ENST00000575113.1

RFWD3-208, Transcript of ring finger and WD repeat domain 3, human

TSL 3

Gene RFWD3, Length 706 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFWD3-208	ENST00000575113	KSR2	Q6VAB6	950 aa		27.73	■■■□□ 2.03
RFWD3-208	ENST00000575113	DPF2	Q92785	391 aa		27.73	■■■□□ 2.03
RFWD3-208	ENST00000575113	CCDC85A	Q96PX6	553 aa	Predicted RBP	27.73	■■■□□ 2.03
RFWD3-208	ENST00000575113	TLL2	Q9Y6L7	1015 aa		27.73	■■■□□ 2.03
RFWD3-208	ENST00000575113	UFL1	O94874	794 aa		27.72	■■■□□ 2.03
RFWD3-208	ENST00000575113	HIRA	P54198	1017 aa	Predicted RBP	27.72	■■■□□ 2.03
RFWD3-208	ENST00000575113	NEXN	Q0ZGT2	675 aa		27.72	■■■□□ 2.03
RFWD3-208	ENST00000575113	CDC37L1	Q7L3B6	337 aa		27.72	■■■□□ 2.03
RFWD3-208	ENST00000575113	WWC1	Q8IX03	1113 aa		27.72	■■■□□ 2.03
RFWD3-208	ENST00000575113	GPR101	Q96P66	508 aa	Predicted RBP	27.72	■■■□□ 2.03
RFWD3-208	ENST00000575113	SHTN1	A0MZ66	631 aa		27.71	■■■□□ 2.03
RFWD3-208	ENST00000575113	PI4KAP2	A4QPH2	592 aa		27.71	■■■□□ 2.03
RFWD3-208	ENST00000575113	CYP4F22	Q6NT55	531 aa		27.71	■■■□□ 2.03
RFWD3-208	ENST00000575113	PI4KAP1	Q8N8J0	262 aa		27.71	■■■□□ 2.03
RFWD3-208	ENST00000575113	ZNF408	Q9H9D4	720 aa		27.71	■■■□□ 2.03
RFWD3-208	ENST00000575113	PODXL2	Q9NZ53	605 aa		27.71	■■■□□ 2.03
RFWD3-208	ENST00000575113	GGA1	Q9UJY5	639 aa		27.71	■■■□□ 2.03
RFWD3-208	ENST00000575113	RPS12	P25398	132 aa	Known RBP	27.7	■■■□□ 2.02
RFWD3-208	ENST00000575113	TWISTNB	Q3B726	338 aa	Predicted RBP	27.7	■■■□□ 2.02
RFWD3-208	ENST00000575113	ANKRD18A	Q8IVF6	992 aa		27.7	■■■□□ 2.02
RFWD3-208	ENST00000575113	MRS2	Q9HD23	443 aa		27.7	■■■□□ 2.02
RFWD3-208	ENST00000575113	COL4A1	P02462	1669 aa		27.7	■■■□□ 2.02
RFWD3-208	ENST00000575113	LBX1	P52954	281 aa		27.69	■■■□□ 2.02
RFWD3-208	ENST00000575113	SAMD7	Q7Z3H4	446 aa		27.69	■■■□□ 2.02
RFWD3-208	ENST00000575113	BEGAIN	Q9BUH8	593 aa		27.69	■■■□□ 2.02
RFWD3-208	ENST00000575113	ZEB1	P37275	1124 aa	Predicted RBP	27.68	■■■□□ 2.02
RFWD3-208	ENST00000575113	KCNQ5	Q9NR82	932 aa		27.68	■■■□□ 2.02
RFWD3-208	ENST00000575113	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	27.67	■■■□□ 2.02
RFWD3-208	ENST00000575113	CDC5L	Q99459	802 aa	Known RBP	27.67	■■■□□ 2.02
RFWD3-208	ENST00000575113	IL16	Q14005	1332 aa		27.67	■■■□□ 2.02
RFWD3-208	ENST00000575113	RTL9	Q8NET4	1388 aa		27.66	■■■□□ 2.02
RFWD3-208	ENST00000575113	ANP32C	O43423	234 aa		27.66	■■■□□ 2.02
RFWD3-208	ENST00000575113	SLC4A2	P04920	1241 aa		27.66	■■■□□ 2.02
RFWD3-208	ENST00000575113	IGKV5-2	P06315	115 aa		27.66	■■■□□ 2.02
RFWD3-208	ENST00000575113	CTSW	P56202	376 aa		27.66	■■■□□ 2.02
RFWD3-208	ENST00000575113	RBM26	Q5T8P6	1007 aa	Known RBP	27.66	■■■□□ 2.02
RFWD3-208	ENST00000575113	SAPCD2	Q86UD0	394 aa		27.66	■■■□□ 2.02
RFWD3-208	ENST00000575113	USP48	Q86UV5	1035 aa		27.66	■■■□□ 2.02
RFWD3-208	ENST00000575113	XDH	P47989	1333 aa		27.65	■■■□□ 2.02
RFWD3-208	ENST00000575113	HSPA8	P11142	646 aa	Known RBP	27.64	■■■□□ 2.02
RFWD3-208	ENST00000575113	CWF19L2	Q2TBE0	894 aa	Known RBP	27.64	■■■□□ 2.02
RFWD3-208	ENST00000575113	TRPM7	Q96QT4	1865 aa		27.64	■■■□□ 2.01
RFWD3-208	ENST00000575113	DCPS	Q96C86	337 aa	Known RBP	27.63	■■■□□ 2.01
RFWD3-208	ENST00000575113	NEURL1B	A8MQ27	555 aa		27.62	■■■□□ 2.01
RFWD3-208	ENST00000575113	VIL1	P09327	827 aa	Known RBP	27.62	■■■□□ 2.01
RFWD3-208	ENST00000575113	ATP2B4	P23634	1241 aa		27.62	■■■□□ 2.01
RFWD3-208	ENST00000575113	NCBP3	Q53F19	620 aa	Known RBP	27.62	■■■□□ 2.01
RFWD3-208	ENST00000575113	G2E3	Q7L622	706 aa		27.62	■■■□□ 2.01
RFWD3-208	ENST00000575113	KRT26	Q7Z3Y9	468 aa		27.62	■■■□□ 2.01
RFWD3-208	ENST00000575113	HHIPL1	Q96JK4	782 aa		27.62	■■■□□ 2.01
RFWD3-208	ENST00000575113	SALL2	Q9Y467	1007 aa	Predicted RBP	27.62	■■■□□ 2.01
RFWD3-208	ENST00000575113	AOC2	O75106	756 aa		27.61	■■■□□ 2.01
RFWD3-208	ENST00000575113	EGFR	P00533	1210 aa		27.61	■■■□□ 2.01
RFWD3-208	ENST00000575113	MAP2K2	P36507	400 aa		27.61	■■■□□ 2.01
RFWD3-208	ENST00000575113	TTLL11	Q8NHH1	800 aa		27.61	■■■□□ 2.01
RFWD3-208	ENST00000575113	KIF4B	Q2VIQ3	1234 aa		27.6	■■■□□ 2.01
RFWD3-208	ENST00000575113	UBE3B	Q7Z3V4	1068 aa		27.6	■■■□□ 2.01
RFWD3-208	ENST00000575113	GREM2	Q9H772	168 aa		27.6	■■■□□ 2.01
RFWD3-208	ENST00000575113	FLII	Q13045	1269 aa		27.59	■■■□□ 2.01
RFWD3-208	ENST00000575113	FKBP5	Q13451	457 aa	Predicted RBP	27.59	■■■□□ 2.01
RFWD3-208	ENST00000575113	FANCI	Q9NVI1	1328 aa		27.59	■■■□□ 2.01
RFWD3-208	ENST00000575113	RSBN1L	Q6PCB5	846 aa	Predicted RBP	27.58	■■■□□ 2.01
RFWD3-208	ENST00000575113	BSDC1	Q9NW68	430 aa	Predicted RBP	27.58	■■■□□ 2.01
RFWD3-208	ENST00000575113	ZNF316	A6NFI3	1004 aa	Predicted RBP	27.57	■■■□□ 2
RFWD3-208	ENST00000575113	HUNK	P57058	714 aa		27.57	■■■□□ 2
RFWD3-208	ENST00000575113	AGBL3	Q8NEM8	1001 aa		27.57	■■■□□ 2
RFWD3-208	ENST00000575113	MYH16	Q9H6N6	1097 aa		27.57	■■■□□ 2
RFWD3-208	ENST00000575113		H7C1W4	665 aa		27.56	■■■□□ 2
RFWD3-208	ENST00000575113	DLK2	Q6UY11	383 aa		27.56	■■■□□ 2
RFWD3-208	ENST00000575113	PODN	Q7Z5L7	613 aa		27.56	■■■□□ 2
RFWD3-208	ENST00000575113	WDR63	Q8IWG1	891 aa		27.56	■■■□□ 2
RFWD3-208	ENST00000575113	SULF1	Q8IWU6	871 aa		27.56	■■■□□ 2
RFWD3-208	ENST00000575113	MINPP1	Q9UNW1	487 aa		27.56	■■■□□ 2
RFWD3-208	ENST00000575113	THSD7B	Q9C0I4	1608 aa		27.56	■■■□□ 2
RFWD3-208	ENST00000575113	ADM5	C9JUS6	153 aa		27.55	■■■□□ 2
RFWD3-208	ENST00000575113	IGHMBP2	P38935	993 aa	Known RBP	27.55	■■■□□ 2
RFWD3-208	ENST00000575113	GCKR	Q14397	625 aa		27.55	■■■□□ 2
RFWD3-208	ENST00000575113	C2orf69	Q8N8R5	385 aa		27.55	■■■□□ 2
RFWD3-208	ENST00000575113	DNAAF4	Q8WXU2	420 aa		27.55	■■■□□ 2
RFWD3-208	ENST00000575113	GGA3	Q9NZ52	723 aa		27.55	■■■□□ 2
RFWD3-208	ENST00000575113	USP17L3	A6NCW0	530 aa		27.54	■■■□□ 2
RFWD3-208	ENST00000575113	USP17L4	A6NCW7	530 aa		27.54	■■■□□ 2
RFWD3-208	ENST00000575113	USP17L1	Q7RTZ2	530 aa		27.54	■■■□□ 2
RFWD3-208	ENST00000575113	GBA2	Q9HCG7	927 aa	Predicted RBP	27.54	■■■□□ 2
RFWD3-208	ENST00000575113	CCT4	P50991	539 aa	Known RBP	27.53	■■■□□ 2
RFWD3-208	ENST00000575113	MED23	Q9ULK4	1368 aa		27.52	■■■□□ 2
RFWD3-208	ENST00000575113	CA12	O43570	354 aa		27.52	■■■□□ 2
RFWD3-208	ENST00000575113	USP17L8	P0C7I0	530 aa		27.52	■■■□□ 2
RFWD3-208	ENST00000575113	ZNF280A	P59817	542 aa	Predicted RBP	27.52	■■■□□ 2
RFWD3-208	ENST00000575113	EXOSC9	Q06265	439 aa	Known RBP	27.52	■■■□□ 2
RFWD3-208	ENST00000575113	NOG	Q13253	232 aa		27.52	■■■□□ 2
RFWD3-208	ENST00000575113	LINS1	Q8NG48	757 aa		27.52	■■■□□ 2
RFWD3-208	ENST00000575113	VAMP4	O75379	141 aa		27.51	■■□□□ 1.99
RFWD3-208	ENST00000575113	BRPF1	P55201	1214 aa	Predicted RBP	27.51	■■□□□ 1.99
RFWD3-208	ENST00000575113	MPHOSPH8	Q99549	860 aa		27.51	■■□□□ 1.99
RFWD3-208	ENST00000575113	PLA2G12B	Q9BX93	195 aa		27.51	■■□□□ 1.99
RFWD3-208	ENST00000575113	TSKS	Q9UJT2	592 aa		27.51	■■□□□ 1.99
RFWD3-208	ENST00000575113	WTIP	A6NIX2	430 aa	Predicted RBP	27.5	■■□□□ 1.99
RFWD3-208	ENST00000575113	ITGA6	P23229	1130 aa		27.5	■■□□□ 1.99
RFWD3-208	ENST00000575113	SCARF1	Q14162	830 aa		27.5	■■□□□ 1.99

Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms