RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 SMIM5Q71RC9 77 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 LRRN4CLQ8ND94 238 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 KRT85P78386 507 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 METTL24Q5JXM2 366 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 RALYLQ86SE5 291 aaKnown RBP10.03□□□□□ -0.8
RPAIN-215ENST00000575112 ABCF2Q9UG63 623 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 STAP2Q9UGK3 403 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 GOLGA6L19H0YKK7 550 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 GCKRQ14397 625 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 VPS53Q5VIR6 699 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 ARHGEF25Q86VW2 580 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 TRERF1Q96PN7 1200 aa10.03□□□□□ -0.8
RPAIN-215ENST00000575112 IGKV5-2P06315 115 aa10.02□□□□□ -0.8
RPAIN-215ENST00000575112 A0A0G2JLW4 131 aa10.02□□□□□ -0.81
RPAIN-215ENST00000575112 SLC27A2O14975 620 aa10.02□□□□□ -0.81
RPAIN-215ENST00000575112 TNNT1P13805 278 aa10.02□□□□□ -0.81
RPAIN-215ENST00000575112 ZNF771Q7L3S4 317 aaPredicted RBP10.02□□□□□ -0.81
RPAIN-215ENST00000575112 GJB4Q9NTQ9 266 aa10.02□□□□□ -0.81
RPAIN-215ENST00000575112 PEAK1Q9H792 1746 aa10.02□□□□□ -0.81
RPAIN-215ENST00000575112 CCDC171Q6TFL3 1326 aa10.02□□□□□ -0.81
RPAIN-215ENST00000575112 CTIFO43310 598 aaKnown RBP10.02□□□□□ -0.81
RPAIN-215ENST00000575112 PTPN21Q16825 1174 aa10.02□□□□□ -0.81
RPAIN-215ENST00000575112 LDHAL6AQ6ZMR3 332 aa10.02□□□□□ -0.81
RPAIN-215ENST00000575112 NEK1Q96PY6 1258 aa10.02□□□□□ -0.81
RPAIN-215ENST00000575112 C19orf44Q9H6X5 657 aa10.02□□□□□ -0.81
RPAIN-215ENST00000575112 CTNNA3Q9UI47 895 aa10.02□□□□□ -0.81
RPAIN-215ENST00000575112 ERICH4A6NGS2 130 aa10.01□□□□□ -0.81
RPAIN-215ENST00000575112 NEURL1BA8MQ27 555 aa10.01□□□□□ -0.81
RPAIN-215ENST00000575112 HTATSF1O43719 755 aaKnown RBP10.01□□□□□ -0.81
RPAIN-215ENST00000575112 ZSCAN25Q6NSZ9 544 aa10.01□□□□□ -0.81
RPAIN-215ENST00000575112 TMOD3Q9NYL9 352 aa10.01□□□□□ -0.81
RPAIN-215ENST00000575112 TRMT112Q9UI30 125 aaKnown RBP10.01□□□□□ -0.81
RPAIN-215ENST00000575112 ARHGEF10O15013 1369 aa10.01□□□□□ -0.81
RPAIN-215ENST00000575112 ZCRB1Q8TBF4 217 aaKnown RBP10.01□□□□□ -0.81
RPAIN-215ENST00000575112 NUP133Q8WUM0 1156 aa10.01□□□□□ -0.81
RPAIN-215ENST00000575112 PGBD1Q96JS3 809 aa10.01□□□□□ -0.81
RPAIN-215ENST00000575112 SLC52A2Q9HAB3 445 aa10.01□□□□□ -0.81
RPAIN-215ENST00000575112 DBNLQ9UJU6 430 aaKnown RBP10.01□□□□□ -0.81
RPAIN-215ENST00000575112 NUP62CLQ9H1M0 184 aa10.01□□□□□ -0.81
RPAIN-215ENST00000575112 DLC1Q96QB1 1528 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 CCDC158Q5M9N0 1113 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 DNAJC10Q8IXB1 793 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 FAM177A1Q8N128 213 aaPredicted RBP10□□□□□ -0.81
RPAIN-215ENST00000575112 BBXQ8WY36 941 aaPredicted RBP10□□□□□ -0.81
RPAIN-215ENST00000575112 TMX1Q9H3N1 280 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 ADAMTS13Q76LX8 1427 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 CYP27B1O15528 508 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 CCDC192P0DO97 292 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 ZKSCAN3Q9BRR0 538 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 MYL10Q9BUA6 226 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 CEP170BQ9Y4F5 1589 aaPredicted RBP10□□□□□ -0.81
RPAIN-215ENST00000575112 TAF5LO75529 589 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 TRDNQ13061 729 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 KMT5BQ4FZB7 885 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 C11orf57Q6ZUT1 292 aaPredicted RBP10□□□□□ -0.81
RPAIN-215ENST00000575112 FAM200AQ8TCP9 573 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 CWC25Q9NXE8 425 aaPredicted RBP10□□□□□ -0.81
RPAIN-215ENST00000575112 ZNF215Q9UL58 517 aaPredicted RBP10□□□□□ -0.81
RPAIN-215ENST00000575112 PLEKHG1Q9ULL1 1385 aa10□□□□□ -0.81
RPAIN-215ENST00000575112 TNNI3KQ59H18 835 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 KIF6Q6ZMV9 814 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 MICU3Q86XE3 530 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 ASAP1Q9ULH1 1129 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 FPGT-TNNI3KV9GXZ4 949 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 MINDY4BA8MYZ0 360 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 RAD21O60216 631 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 PHKG2P15735 406 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 MARCKSP29966 332 aaPredicted RBP9.99□□□□□ -0.81
RPAIN-215ENST00000575112 ADORA1P30542 326 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 CHAF1AQ13111 956 aaPredicted RBP9.99□□□□□ -0.81
RPAIN-215ENST00000575112 MAP3K11Q16584 847 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 TPD52L1Q16890 204 aaPredicted RBP9.99□□□□□ -0.81
RPAIN-215ENST00000575112 FAM182BQ5T319 152 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 CCDC73Q6ZRK6 1079 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 ALDH1L1O75891 902 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 STK38Q15208 465 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 VPS37DQ86XT2 251 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 SIRT1Q96EB6 747 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 NPHP3Q7Z494 1330 aa9.99□□□□□ -0.81
RPAIN-215ENST00000575112 SLFN14P0C7P3 912 aa9.98□□□□□ -0.81
RPAIN-215ENST00000575112 IFIT5Q13325 482 aaKnown RBP9.98□□□□□ -0.81
RPAIN-215ENST00000575112 METTL22Q9BUU2 404 aaPredicted RBP9.98□□□□□ -0.81
RPAIN-215ENST00000575112 INCENPQ9NQS7 918 aa9.98□□□□□ -0.81
RPAIN-215ENST00000575112 A0A1B0GUL7 405 aa9.98□□□□□ -0.81
RPAIN-215ENST00000575112 ZNF75DP51815 510 aa9.98□□□□□ -0.81
RPAIN-215ENST00000575112 ELF2Q15723 593 aa9.98□□□□□ -0.81
RPAIN-215ENST00000575112 SYNE3Q6ZMZ3 975 aa9.98□□□□□ -0.81
RPAIN-215ENST00000575112 CMTR1Q8N1G2 835 aaKnown RBP9.98□□□□□ -0.81
RPAIN-215ENST00000575112 GTPBP4Q9BZE4 634 aaKnown RBP9.98□□□□□ -0.81
RPAIN-215ENST00000575112 CLIP2Q9UDT6 1046 aa9.98□□□□□ -0.81
RPAIN-215ENST00000575112 hCG_1642624A0A1W2PR95 340 aa9.98□□□□□ -0.81
RPAIN-215ENST00000575112 ZNF165P49910 485 aa9.98□□□□□ -0.81
RPAIN-215ENST00000575112 MIGA1Q8NAN2 632 aa9.98□□□□□ -0.81
RPAIN-215ENST00000575112 PES1O00541 588 aaKnown RBP9.97□□□□□ -0.81
RPAIN-215ENST00000575112 SMC2O95347 1197 aa9.97□□□□□ -0.81
RPAIN-215ENST00000575112 PAG1Q9NWQ8 432 aa9.97□□□□□ -0.81
RPAIN-215ENST00000575112 ERBB3P21860 1342 aa9.97□□□□□ -0.81
RPAIN-215ENST00000575112 ADCY9O60503 1353 aa9.97□□□□□ -0.81
RPAIN-215ENST00000575112 PDILTQ8N807 584 aa9.97□□□□□ -0.81
RPAIN-215ENST00000575112 TMEM51Q9NW97 253 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms