RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 PSMA5P28066 241 aa28.3■■■□□ 2.12
NPLOC4-217ENST00000574897 DZIP3Q86Y13 1208 aaKnown RBP28.3■■■□□ 2.12
NPLOC4-217ENST00000574897 MARCH10Q8NA82 808 aaPredicted RBP28.29■■■□□ 2.12
NPLOC4-217ENST00000574897 RPS6KB1P23443 525 aa28.29■■■□□ 2.12
NPLOC4-217ENST00000574897 GJB2P29033 226 aa28.29■■■□□ 2.12
NPLOC4-217ENST00000574897 TTLL11Q8NHH1 800 aa28.29■■■□□ 2.12
NPLOC4-217ENST00000574897 SLIT2O94813 1529 aa28.29■■■□□ 2.12
NPLOC4-217ENST00000574897 UBN2Q6ZU65 1347 aa28.28■■■□□ 2.12
NPLOC4-217ENST00000574897 PIP4K2BP78356 416 aa28.28■■■□□ 2.12
NPLOC4-217ENST00000574897 XAGE2Q96GT9 111 aa28.28■■■□□ 2.12
NPLOC4-217ENST00000574897 SH3TC1Q8TE82 1336 aa28.28■■■□□ 2.12
NPLOC4-217ENST00000574897 CDHR2Q9BYE9 1310 aa28.28■■■□□ 2.12
NPLOC4-217ENST00000574897 RIC1Q4ADV7 1423 aa28.28■■■□□ 2.12
NPLOC4-217ENST00000574897 MYH14Q7Z406 1995 aaKnown RBP28.28■■■□□ 2.12
NPLOC4-217ENST00000574897 ZSCAN31Q96LW9 406 aaPredicted RBP28.28■■■□□ 2.12
NPLOC4-217ENST00000574897 HMG20BQ9P0W2 317 aa28.28■■■□□ 2.12
NPLOC4-217ENST00000574897 TRMT112Q9UI30 125 aaKnown RBP28.28■■■□□ 2.12
NPLOC4-217ENST00000574897 CYP21A2P08686 494 aa28.27■■■□□ 2.12
NPLOC4-217ENST00000574897 ITGA6P23229 1130 aa28.27■■■□□ 2.12
NPLOC4-217ENST00000574897 TOB2Q14106 344 aaPredicted RBP28.27■■■□□ 2.12
NPLOC4-217ENST00000574897 ZSCAN23Q3MJ62 389 aa28.27■■■□□ 2.12
NPLOC4-217ENST00000574897 STX6O43752 255 aa28.26■■■□□ 2.12
NPLOC4-217ENST00000574897 FKBP4Q02790 459 aaKnown RBP eCLIP28.26■■■□□ 2.12
NPLOC4-217ENST00000574897 SCARF1Q14162 830 aa28.26■■■□□ 2.12
NPLOC4-217ENST00000574897 SH2B1Q9NRF2 756 aaPredicted RBP28.26■■■□□ 2.12
NPLOC4-217ENST00000574897 IRS4O14654 1257 aaPredicted RBP28.26■■■□□ 2.11
NPLOC4-217ENST00000574897 TSGA10IPQ3SY00 556 aa28.26■■■□□ 2.11
NPLOC4-217ENST00000574897 HSP90AB3PQ58FF7 597 aa28.26■■■□□ 2.11
NPLOC4-217ENST00000574897 IL6STP40189 918 aaPredicted RBP28.25■■■□□ 2.11
NPLOC4-217ENST00000574897 CTSWP56202 376 aa28.25■■■□□ 2.11
NPLOC4-217ENST00000574897 SPEF2Q9C093 1822 aa28.25■■■□□ 2.11
NPLOC4-217ENST00000574897 A0A0G2JLW4 131 aa28.25■■■□□ 2.11
NPLOC4-217ENST00000574897 ZSCAN22P10073 491 aaPredicted RBP28.25■■■□□ 2.11
NPLOC4-217ENST00000574897 GORABQ5T7V8 394 aa28.25■■■□□ 2.11
NPLOC4-217ENST00000574897 TMEM63CQ9P1W3 806 aa28.25■■■□□ 2.11
NPLOC4-217ENST00000574897 PI16Q6UXB8 463 aa28.24■■■□□ 2.11
NPLOC4-217ENST00000574897 ISY1Q9ULR0 285 aaKnown RBP28.24■■■□□ 2.11
NPLOC4-217ENST00000574897 TTC39AQ5SRH9 613 aa28.24■■■□□ 2.11
NPLOC4-217ENST00000574897 ZMYM1Q5SVZ6 1142 aa28.24■■■□□ 2.11
NPLOC4-217ENST00000574897 U3KPZ7 1027 aaPredicted RBP28.24■■■□□ 2.11
NPLOC4-217ENST00000574897 MYO5AQ9Y4I1 1855 aaKnown RBP28.24■■■□□ 2.11
NPLOC4-217ENST00000574897 GADD45BO75293 160 aaPredicted RBP28.23■■■□□ 2.11
NPLOC4-217ENST00000574897 INTS5Q6P9B9 1019 aaKnown RBP28.23■■■□□ 2.11
NPLOC4-217ENST00000574897 LDHAL6AQ6ZMR3 332 aa28.23■■■□□ 2.11
NPLOC4-217ENST00000574897 RIPOR2Q9Y4F9 1068 aa28.23■■■□□ 2.11
NPLOC4-217ENST00000574897 MAST3O60307 1309 aa28.23■■■□□ 2.11
NPLOC4-217ENST00000574897 AKAP11Q9UKA4 1901 aa28.23■■■□□ 2.11
NPLOC4-217ENST00000574897 ATP6V1AP38606 617 aa28.23■■■□□ 2.11
NPLOC4-217ENST00000574897 STOX1Q6ZVD7 989 aa28.23■■■□□ 2.11
NPLOC4-217ENST00000574897 MYH7P12883 1935 aa28.23■■■□□ 2.11
NPLOC4-217ENST00000574897 FAM177BA6PVY3 158 aa28.22■■■□□ 2.11
NPLOC4-217ENST00000574897 STK3Q13188 491 aa28.22■■■□□ 2.11
NPLOC4-217ENST00000574897 CDCA7Q9BWT1 371 aaPredicted RBP28.22■■■□□ 2.11
NPLOC4-217ENST00000574897 FBXO3Q9UK99 471 aa28.22■■■□□ 2.11
NPLOC4-217ENST00000574897 AKAP2Q9Y2D5 859 aa28.22■■■□□ 2.11
NPLOC4-217ENST00000574897 SPATA31A5Q5VU36 1347 aa28.22■■■□□ 2.11
NPLOC4-217ENST00000574897 SPATA31A7Q8IWB4 1347 aa28.22■■■□□ 2.11
NPLOC4-217ENST00000574897 METTL24Q5JXM2 366 aa28.22■■■□□ 2.11
NPLOC4-217ENST00000574897 CCDC158Q5M9N0 1113 aa28.22■■■□□ 2.11
NPLOC4-217ENST00000574897 HELLSQ9NRZ9 838 aa28.22■■■□□ 2.11
NPLOC4-217ENST00000574897 THRAP3Q9Y2W1 955 aaKnown RBP28.22■■■□□ 2.11
NPLOC4-217ENST00000574897 M0R2C6 588 aa28.21■■■□□ 2.11
NPLOC4-217ENST00000574897 CRKLP46109 303 aaKnown RBP28.21■■■□□ 2.11
NPLOC4-217ENST00000574897 ITPK1Q13572 414 aa28.21■■■□□ 2.11
NPLOC4-217ENST00000574897 NEK1Q96PY6 1258 aa28.21■■■□□ 2.11
NPLOC4-217ENST00000574897 CNPY2Q9Y2B0 182 aa28.21■■■□□ 2.11
NPLOC4-217ENST00000574897 ERVV-1B6SEH8 477 aa28.21■■■□□ 2.11
NPLOC4-217ENST00000574897 RNF113AO15541 343 aaKnown RBP28.21■■■□□ 2.11
NPLOC4-217ENST00000574897 EIF5P55010 431 aaKnown RBP28.21■■■□□ 2.11
NPLOC4-217ENST00000574897 ZNF445P59923 1031 aa28.21■■■□□ 2.11
NPLOC4-217ENST00000574897 USP48Q86UV5 1035 aa28.21■■■□□ 2.11
NPLOC4-217ENST00000574897 ZNF34Q8IZ26 560 aa28.21■■■□□ 2.11
NPLOC4-217ENST00000574897 F13A1P00488 732 aa28.2■■■□□ 2.1
NPLOC4-217ENST00000574897 LRRC2Q9BYS8 371 aa28.2■■■□□ 2.1
NPLOC4-217ENST00000574897 ANKRD18BA2A2Z9 1011 aa28.19■■■□□ 2.1
NPLOC4-217ENST00000574897 ATP2B3Q16720 1220 aa28.19■■■□□ 2.1
NPLOC4-217ENST00000574897 CNNM1Q9NRU3 951 aa28.19■■■□□ 2.1
NPLOC4-217ENST00000574897 CCDC87Q9NVE4 849 aa28.19■■■□□ 2.1
NPLOC4-217ENST00000574897 MTMR6Q9Y217 621 aa28.19■■■□□ 2.1
NPLOC4-217ENST00000574897 LOC102724428A0A0B4J2F2 783 aa28.19■■■□□ 2.1
NPLOC4-217ENST00000574897 ZAP70P43403 619 aa28.19■■■□□ 2.1
NPLOC4-217ENST00000574897 SIK1P57059 783 aa28.19■■■□□ 2.1
NPLOC4-217ENST00000574897 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.19■■■□□ 2.1
NPLOC4-217ENST00000574897 OSBP2Q969R2 916 aa28.19■■■□□ 2.1
NPLOC4-217ENST00000574897 NWD2Q9ULI1 1742 aa28.18■■■□□ 2.1
NPLOC4-217ENST00000574897 KCNQ2O43526 872 aa28.18■■■□□ 2.1
NPLOC4-217ENST00000574897 KRT32Q14532 448 aa28.18■■■□□ 2.1
NPLOC4-217ENST00000574897 PDE8AO60658 829 aa28.18■■■□□ 2.1
NPLOC4-217ENST00000574897 HSPD1P10809 573 aaKnown RBP28.18■■■□□ 2.1
NPLOC4-217ENST00000574897 TPRNQ4KMQ1 711 aa28.18■■■□□ 2.1
NPLOC4-217ENST00000574897 HCLS1P14317 486 aaPredicted RBP28.17■■■□□ 2.1
NPLOC4-217ENST00000574897 ANKRD1Q15327 319 aa28.17■■■□□ 2.1
NPLOC4-217ENST00000574897 ALDH8A1Q9H2A2 487 aaPredicted RBP28.17■■■□□ 2.1
NPLOC4-217ENST00000574897 VPS37CA5D8V6 355 aaPredicted RBP28.17■■■□□ 2.1
NPLOC4-217ENST00000574897 SUSD4Q5VX71 490 aa28.17■■■□□ 2.1
NPLOC4-217ENST00000574897 Q6ZUG5 572 aa28.17■■■□□ 2.1
NPLOC4-217ENST00000574897 VGLL2Q8N8G2 317 aa28.16■■■□□ 2.1
NPLOC4-217ENST00000574897 DSCC1Q9BVC3 393 aa28.16■■■□□ 2.1
NPLOC4-217ENST00000574897 SYCE3A1L190 88 aa28.15■■■□□ 2.1
NPLOC4-217ENST00000574897 MBD3O95983 291 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms