RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 MICALL2Q8IY33 904 aa27.1■■□□□ 1.93
CHRNB1-206ENST00000574054 AIDAQ96BJ3 306 aa27.1■■□□□ 1.93
CHRNB1-206ENST00000574054 ZC3H12CQ9C0D7 883 aaKnown RBP27.1■■□□□ 1.93
CHRNB1-206ENST00000574054 GGA1Q9UJY5 639 aa27.1■■□□□ 1.93
CHRNB1-206ENST00000574054 G3V3G9 751 aa27.09■■□□□ 1.93
CHRNB1-206ENST00000574054 CWF19L2Q2TBE0 894 aaKnown RBP27.09■■□□□ 1.93
CHRNB1-206ENST00000574054 DCAF8Q5TAQ9 597 aa27.09■■□□□ 1.93
CHRNB1-206ENST00000574054 ANKRD18AQ8IVF6 992 aa27.09■■□□□ 1.93
CHRNB1-206ENST00000574054 GLIS2Q9BZE0 524 aaPredicted RBP27.09■■□□□ 1.93
CHRNB1-206ENST00000574054 PODXL2Q9NZ53 605 aa27.09■■□□□ 1.93
CHRNB1-206ENST00000574054 FANCIQ9NVI1 1328 aa27.09■■□□□ 1.93
CHRNB1-206ENST00000574054 FOXN1O15353 648 aa27.08■■□□□ 1.93
CHRNB1-206ENST00000574054 HIRAP54198 1017 aaPredicted RBP27.08■■□□□ 1.93
CHRNB1-206ENST00000574054 CTSWP56202 376 aa27.08■■□□□ 1.93
CHRNB1-206ENST00000574054 NCBP3Q53F19 620 aaKnown RBP27.08■■□□□ 1.93
CHRNB1-206ENST00000574054 KCNQ5Q9NR82 932 aa27.08■■□□□ 1.93
CHRNB1-206ENST00000574054 WDR33Q9C0J8 1336 aaKnown RBP27.08■■□□□ 1.93
CHRNB1-206ENST00000574054 CST9Q5W186 159 aa27.07■■□□□ 1.92
CHRNB1-206ENST00000574054 NEURL1BA8MQ27 555 aa27.06■■□□□ 1.92
CHRNB1-206ENST00000574054 GRM1Q13255 1194 aa27.06■■□□□ 1.92
CHRNB1-206ENST00000574054 ZC3H15Q8WU90 426 aaKnown RBP27.06■■□□□ 1.92
CHRNB1-206ENST00000574054 DPF2Q92785 391 aa27.06■■□□□ 1.92
CHRNB1-206ENST00000574054 RTL9Q8NET4 1388 aa27.06■■□□□ 1.92
CHRNB1-206ENST00000574054 CELF2O95319 508 aaKnown RBP27.05■■□□□ 1.92
CHRNB1-206ENST00000574054 FLIIQ13045 1269 aa27.05■■□□□ 1.92
CHRNB1-206ENST00000574054 UBE3BQ7Z3V4 1068 aa27.05■■□□□ 1.92
CHRNB1-206ENST00000574054 WDR63Q8IWG1 891 aa27.05■■□□□ 1.92
CHRNB1-206ENST00000574054 CDC5LQ99459 802 aaKnown RBP27.05■■□□□ 1.92
CHRNB1-206ENST00000574054 PGAP2Q9UHJ9 254 aa27.05■■□□□ 1.92
CHRNB1-206ENST00000574054 TRPM7Q96QT4 1865 aa27.04■■□□□ 1.92
CHRNB1-206ENST00000574054 CAPN15O75808 1086 aa27.04■■□□□ 1.92
CHRNB1-206ENST00000574054 RPS12P25398 132 aaKnown RBP27.04■■□□□ 1.92
CHRNB1-206ENST00000574054 FKBP5Q13451 457 aaPredicted RBP27.04■■□□□ 1.92
CHRNB1-206ENST00000574054 SAMD7Q7Z3H4 446 aa27.04■■□□□ 1.92
CHRNB1-206ENST00000574054 ZNF408Q9H9D4 720 aa27.04■■□□□ 1.92
CHRNB1-206ENST00000574054 XDHP47989 1333 aa27.03■■□□□ 1.92
CHRNB1-206ENST00000574054 TBC1D10BQ4KMP7 808 aaPredicted RBP27.03■■□□□ 1.92
CHRNB1-206ENST00000574054 TTLL11Q8NHH1 800 aa27.03■■□□□ 1.92
CHRNB1-206ENST00000574054 CAPNS2Q96L46 248 aa27.03■■□□□ 1.92
CHRNB1-206ENST00000574054 GREM2Q9H772 168 aa27.03■■□□□ 1.92
CHRNB1-206ENST00000574054 WBP1LQ9NX94 342 aa27.03■■□□□ 1.92
CHRNB1-206ENST00000574054 TLL2Q9Y6L7 1015 aa27.03■■□□□ 1.92
CHRNB1-206ENST00000574054 ECE1P42892 770 aa27.02■■□□□ 1.92
CHRNB1-206ENST00000574054 CTCFP49711 727 aaPredicted RBP27.02■■□□□ 1.92
CHRNB1-206ENST00000574054 RBM26Q5T8P6 1007 aaKnown RBP27.02■■□□□ 1.92
CHRNB1-206ENST00000574054 CYP4F22Q6NT55 531 aa27.02■■□□□ 1.92
CHRNB1-206ENST00000574054 CDC37L1Q7L3B6 337 aa27.02■■□□□ 1.92
CHRNB1-206ENST00000574054 EXOSC9Q06265 439 aaKnown RBP27.01■■□□□ 1.91
CHRNB1-206ENST00000574054 FAM9BQ8IZU0 186 aa27.01■■□□□ 1.91
CHRNB1-206ENST00000574054 H7C1W4 665 aa27■■□□□ 1.91
CHRNB1-206ENST00000574054 VAMP4O75379 141 aa27■■□□□ 1.91
CHRNB1-206ENST00000574054 ATP2B4P23634 1241 aa27■■□□□ 1.91
CHRNB1-206ENST00000574054 GCKRQ14397 625 aa27■■□□□ 1.91
CHRNB1-206ENST00000574054 EGFRP00533 1210 aa26.99■■□□□ 1.91
CHRNB1-206ENST00000574054 VIL1P09327 827 aaKnown RBP26.99■■□□□ 1.91
CHRNB1-206ENST00000574054 MAP2K1Q02750 393 aaPredicted RBP26.99■■□□□ 1.91
CHRNB1-206ENST00000574054 USP48Q86UV5 1035 aa26.99■■□□□ 1.91
CHRNB1-206ENST00000574054 DNAAF4Q8WXU2 420 aa26.99■■□□□ 1.91
CHRNB1-206ENST00000574054 MYH16Q9H6N6 1097 aa26.99■■□□□ 1.91
CHRNB1-206ENST00000574054 BSDC1Q9NW68 430 aaPredicted RBP26.98■■□□□ 1.91
CHRNB1-206ENST00000574054 SCN9AQ15858 1988 aa26.97■■□□□ 1.91
CHRNB1-206ENST00000574054 MYH3P11055 1940 aa26.97■■□□□ 1.91
CHRNB1-206ENST00000574054 SAPCD2Q86UD0 394 aa26.97■■□□□ 1.91
CHRNB1-206ENST00000574054 MINPP1Q9UNW1 487 aa26.97■■□□□ 1.91
CHRNB1-206ENST00000574054 KIF4BQ2VIQ3 1234 aa26.96■■□□□ 1.91
CHRNB1-206ENST00000574054 KRT26Q7Z3Y9 468 aa26.96■■□□□ 1.91
CHRNB1-206ENST00000574054 LINS1Q8NG48 757 aa26.96■■□□□ 1.91
CHRNB1-206ENST00000574054 SPINK5Q9NQ38 1064 aaPredicted RBP26.96■■□□□ 1.91
CHRNB1-206ENST00000574054 PRDM10Q9NQV6 1147 aa26.96■■□□□ 1.91
CHRNB1-206ENST00000574054 IGHMBP2P38935 993 aaKnown RBP26.95■■□□□ 1.9
CHRNB1-206ENST00000574054 LBX1P52954 281 aa26.95■■□□□ 1.9
CHRNB1-206ENST00000574054 DLK2Q6UY11 383 aa26.95■■□□□ 1.9
CHRNB1-206ENST00000574054 WTIPA6NIX2 430 aaPredicted RBP26.94■■□□□ 1.9
CHRNB1-206ENST00000574054 FAM161AQ3B820 660 aa26.94■■□□□ 1.9
CHRNB1-206ENST00000574054 RSBN1LQ6PCB5 846 aaPredicted RBP26.94■■□□□ 1.9
CHRNB1-206ENST00000574054 DCPSQ96C86 337 aaKnown RBP26.94■■□□□ 1.9
CHRNB1-206ENST00000574054 SPEF2Q9C093 1822 aa26.94■■□□□ 1.9
CHRNB1-206ENST00000574054 AOC2O75106 756 aa26.93■■□□□ 1.9
CHRNB1-206ENST00000574054 ITGA6P23229 1130 aa26.93■■□□□ 1.9
CHRNB1-206ENST00000574054 CASP7P55210 303 aa26.93■■□□□ 1.9
CHRNB1-206ENST00000574054 BEGAINQ9BUH8 593 aa26.93■■□□□ 1.9
CHRNB1-206ENST00000574054 PLA2G12BQ9BX93 195 aa26.93■■□□□ 1.9
CHRNB1-206ENST00000574054 USP17L3A6NCW0 530 aa26.92■■□□□ 1.9
CHRNB1-206ENST00000574054 USP17L4A6NCW7 530 aa26.92■■□□□ 1.9
CHRNB1-206ENST00000574054 ADM5C9JUS6 153 aa26.92■■□□□ 1.9
CHRNB1-206ENST00000574054 CCT4P50991 539 aaKnown RBP26.92■■□□□ 1.9
CHRNB1-206ENST00000574054 USP17L1Q7RTZ2 530 aa26.92■■□□□ 1.9
CHRNB1-206ENST00000574054 AGBL3Q8NEM8 1001 aa26.92■■□□□ 1.9
CHRNB1-206ENST00000574054 F6X3S4 739 aa26.91■■□□□ 1.9
CHRNB1-206ENST00000574054 HSPA8P11142 646 aaKnown RBP26.91■■□□□ 1.9
CHRNB1-206ENST00000574054 PODNQ7Z5L7 613 aa26.91■■□□□ 1.9
CHRNB1-206ENST00000574054 MPHOSPH8Q99549 860 aa26.91■■□□□ 1.9
CHRNB1-206ENST00000574054 GGA3Q9NZ52 723 aa26.91■■□□□ 1.9
CHRNB1-206ENST00000574054 MED23Q9ULK4 1368 aa26.91■■□□□ 1.9
CHRNB1-206ENST00000574054 CACNA1FO60840 1977 aa26.91■■□□□ 1.9
CHRNB1-206ENST00000574054 FBXW7Q969H0 707 aa26.9■■□□□ 1.9
CHRNB1-206ENST00000574054 HHIPL1Q96JK4 782 aa26.9■■□□□ 1.9
CHRNB1-206ENST00000574054 THSD7BQ9C0I4 1608 aa26.9■■□□□ 1.9
CHRNB1-206ENST00000574054 ASTN2O75129 1339 aaPredicted RBP26.9■■□□□ 1.9
CHRNB1-206ENST00000574054 CSF1RP07333 972 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms