RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 CTCFP49711 727 aaPredicted RBP18.38■□□□□ 0.53
TVP23A-208ENST00000573857 DOK7Q18PE1 504 aa18.38■□□□□ 0.53
TVP23A-208ENST00000573857 TWISTNBQ3B726 338 aaPredicted RBP18.38■□□□□ 0.53
TVP23A-208ENST00000573857 NCBP3Q53F19 620 aaKnown RBP18.38■□□□□ 0.53
TVP23A-208ENST00000573857 CCDC85AQ96PX6 553 aaPredicted RBP18.38■□□□□ 0.53
TVP23A-208ENST00000573857 PRDM10Q9NQV6 1147 aa18.38■□□□□ 0.53
TVP23A-208ENST00000573857 ANKIB1Q9P2G1 1089 aa18.38■□□□□ 0.53
TVP23A-208ENST00000573857 RTL9Q8NET4 1388 aa18.38■□□□□ 0.53
TVP23A-208ENST00000573857 UFL1O94874 794 aa18.37■□□□□ 0.53
TVP23A-208ENST00000573857 CELF2O95319 508 aaKnown RBP18.37■□□□□ 0.53
TVP23A-208ENST00000573857 RPS12P25398 132 aaKnown RBP18.37■□□□□ 0.53
TVP23A-208ENST00000573857 MAP2K1Q02750 393 aaPredicted RBP18.37■□□□□ 0.53
TVP23A-208ENST00000573857 CAPNS2Q96L46 248 aa18.37■□□□□ 0.53
TVP23A-208ENST00000573857 ZC3H12CQ9C0D7 883 aaKnown RBP18.37■□□□□ 0.53
TVP23A-208ENST00000573857 MRS2Q9HD23 443 aa18.37■□□□□ 0.53
TVP23A-208ENST00000573857 KCNQ5Q9NR82 932 aa18.37■□□□□ 0.53
TVP23A-208ENST00000573857 GGA1Q9UJY5 639 aa18.37■□□□□ 0.53
TVP23A-208ENST00000573857 TRPM7Q96QT4 1865 aa18.37■□□□□ 0.53
TVP23A-208ENST00000573857 ZNF316A6NFI3 1004 aaPredicted RBP18.36■□□□□ 0.53
TVP23A-208ENST00000573857 CAPN15O75808 1086 aa18.36■□□□□ 0.53
TVP23A-208ENST00000573857 ECE1P42892 770 aa18.36■□□□□ 0.53
TVP23A-208ENST00000573857 CTSWP56202 376 aa18.36■□□□□ 0.53
TVP23A-208ENST00000573857 NEXNQ0ZGT2 675 aa18.36■□□□□ 0.53
TVP23A-208ENST00000573857 CYP4F22Q6NT55 531 aa18.36■□□□□ 0.53
TVP23A-208ENST00000573857 PAXIP1Q6ZW49 1069 aaPredicted RBP18.36■□□□□ 0.53
TVP23A-208ENST00000573857 CDC37L1Q7L3B6 337 aa18.36■□□□□ 0.53
TVP23A-208ENST00000573857 ANKRD18AQ8IVF6 992 aa18.36■□□□□ 0.53
TVP23A-208ENST00000573857 SLC4A2P04920 1241 aa18.35■□□□□ 0.53
TVP23A-208ENST00000573857 G2E3Q7L622 706 aa18.35■□□□□ 0.53
TVP23A-208ENST00000573857 SAMD7Q7Z3H4 446 aa18.35■□□□□ 0.53
TVP23A-208ENST00000573857 SAPCD2Q86UD0 394 aa18.35■□□□□ 0.53
TVP23A-208ENST00000573857 THSD7BQ9C0I4 1608 aa18.34■□□□□ 0.53
TVP23A-208ENST00000573857 XDHP47989 1333 aa18.34■□□□□ 0.53
TVP23A-208ENST00000573857 FANCIQ9NVI1 1328 aa18.34■□□□□ 0.53
TVP23A-208ENST00000573857 NEURL1BA8MQ27 555 aa18.34■□□□□ 0.53
TVP23A-208ENST00000573857 CWF19L2Q2TBE0 894 aaKnown RBP18.34■□□□□ 0.53
TVP23A-208ENST00000573857 TBC1D10BQ4KMP7 808 aaPredicted RBP18.34■□□□□ 0.53
TVP23A-208ENST00000573857 G3V3G9 751 aa18.33■□□□□ 0.52
TVP23A-208ENST00000573857 ANP32CO43423 234 aa18.33■□□□□ 0.52
TVP23A-208ENST00000573857 EGFRP00533 1210 aa18.33■□□□□ 0.52
TVP23A-208ENST00000573857 VIL1P09327 827 aaKnown RBP18.33■□□□□ 0.52
TVP23A-208ENST00000573857 LBX1P52954 281 aa18.33■□□□□ 0.52
TVP23A-208ENST00000573857 GRM1Q13255 1194 aa18.33■□□□□ 0.52
TVP23A-208ENST00000573857 DCAF8Q5TAQ9 597 aa18.33■□□□□ 0.52
TVP23A-208ENST00000573857 TTLL11Q8NHH1 800 aa18.33■□□□□ 0.52
TVP23A-208ENST00000573857 CDC5LQ99459 802 aaKnown RBP18.33■□□□□ 0.52
TVP23A-208ENST00000573857 ZNF408Q9H9D4 720 aa18.33■□□□□ 0.52
TVP23A-208ENST00000573857 HSPA8P11142 646 aaKnown RBP18.32■□□□□ 0.52
TVP23A-208ENST00000573857 FLIIQ13045 1269 aa18.32■□□□□ 0.52
TVP23A-208ENST00000573857 USP48Q86UV5 1035 aa18.32■□□□□ 0.52
TVP23A-208ENST00000573857 GREM2Q9H772 168 aa18.32■□□□□ 0.52
TVP23A-208ENST00000573857 SCN9AQ15858 1988 aa18.31■□□□□ 0.52
TVP23A-208ENST00000573857 H7C1W4 665 aa18.31■□□□□ 0.52
TVP23A-208ENST00000573857 ATP2B4P23634 1241 aa18.31■□□□□ 0.52
TVP23A-208ENST00000573857 UBE3BQ7Z3V4 1068 aa18.31■□□□□ 0.52
TVP23A-208ENST00000573857 HHIPL1Q96JK4 782 aa18.31■□□□□ 0.52
TVP23A-208ENST00000573857 BSDC1Q9NW68 430 aaPredicted RBP18.31■□□□□ 0.52
TVP23A-208ENST00000573857 ZNF609O15014 1411 aa18.31■□□□□ 0.52
TVP23A-208ENST00000573857 MAP2K2P36507 400 aa18.3■□□□□ 0.52
TVP23A-208ENST00000573857 KIF4BQ2VIQ3 1234 aa18.3■□□□□ 0.52
TVP23A-208ENST00000573857 RBM26Q5T8P6 1007 aaKnown RBP18.3■□□□□ 0.52
TVP23A-208ENST00000573857 KRT26Q7Z3Y9 468 aa18.3■□□□□ 0.52
TVP23A-208ENST00000573857 WDR63Q8IWG1 891 aa18.3■□□□□ 0.52
TVP23A-208ENST00000573857 MINPP1Q9UNW1 487 aa18.3■□□□□ 0.52
TVP23A-208ENST00000573857 SALL2Q9Y467 1007 aaPredicted RBP18.3■□□□□ 0.52
TVP23A-208ENST00000573857 AOC2O75106 756 aa18.29■□□□□ 0.52
TVP23A-208ENST00000573857 FKBP5Q13451 457 aaPredicted RBP18.29■□□□□ 0.52
TVP23A-208ENST00000573857 GCKRQ14397 625 aa18.29■□□□□ 0.52
TVP23A-208ENST00000573857 RSBN1LQ6PCB5 846 aaPredicted RBP18.29■□□□□ 0.52
TVP23A-208ENST00000573857 DLK2Q6UY11 383 aa18.29■□□□□ 0.52
TVP23A-208ENST00000573857 VAMP4O75379 141 aa18.28■□□□□ 0.52
TVP23A-208ENST00000573857 AGBL3Q8NEM8 1001 aa18.28■□□□□ 0.52
TVP23A-208ENST00000573857 DNAAF4Q8WXU2 420 aa18.28■□□□□ 0.52
TVP23A-208ENST00000573857 DCPSQ96C86 337 aaKnown RBP18.28■□□□□ 0.52
TVP23A-208ENST00000573857 BEGAINQ9BUH8 593 aa18.28■□□□□ 0.52
TVP23A-208ENST00000573857 PLA2G12BQ9BX93 195 aa18.28■□□□□ 0.52
TVP23A-208ENST00000573857 MED23Q9ULK4 1368 aa18.28■□□□□ 0.52
TVP23A-208ENST00000573857 WTIPA6NIX2 430 aaPredicted RBP18.27■□□□□ 0.52
TVP23A-208ENST00000573857 ADM5C9JUS6 153 aa18.27■□□□□ 0.52
TVP23A-208ENST00000573857 CASP7P55210 303 aa18.27■□□□□ 0.52
TVP23A-208ENST00000573857 ZNF280AP59817 542 aaPredicted RBP18.27■□□□□ 0.52
TVP23A-208ENST00000573857 PODNQ7Z5L7 613 aa18.27■□□□□ 0.52
TVP23A-208ENST00000573857 MYH16Q9H6N6 1097 aa18.27■□□□□ 0.52
TVP23A-208ENST00000573857 GGA3Q9NZ52 723 aa18.27■□□□□ 0.52
TVP23A-208ENST00000573857 MYH3P11055 1940 aa18.27■□□□□ 0.51
TVP23A-208ENST00000573857 USP17L3A6NCW0 530 aa18.26■□□□□ 0.51
TVP23A-208ENST00000573857 USP17L4A6NCW7 530 aa18.26■□□□□ 0.51
TVP23A-208ENST00000573857 CCT4P50991 539 aaKnown RBP18.26■□□□□ 0.51
TVP23A-208ENST00000573857 EXOSC9Q06265 439 aaKnown RBP18.26■□□□□ 0.51
TVP23A-208ENST00000573857 USP17L1Q7RTZ2 530 aa18.26■□□□□ 0.51
TVP23A-208ENST00000573857 LINS1Q8NG48 757 aa18.26■□□□□ 0.51
TVP23A-208ENST00000573857 GMLQ99445 158 aa18.26■□□□□ 0.51
TVP23A-208ENST00000573857 ASTN2O75129 1339 aaPredicted RBP18.25■□□□□ 0.51
TVP23A-208ENST00000573857 ITGA6P23229 1130 aa18.25■□□□□ 0.51
TVP23A-208ENST00000573857 IGHMBP2P38935 993 aaKnown RBP18.25■□□□□ 0.51
TVP23A-208ENST00000573857 HUNKP57058 714 aa18.25■□□□□ 0.51
TVP23A-208ENST00000573857 FAM161AQ3B820 660 aa18.25■□□□□ 0.51
TVP23A-208ENST00000573857 SPINK5Q9NQ38 1064 aaPredicted RBP18.25■□□□□ 0.51
TVP23A-208ENST00000573857 CSF1RP07333 972 aa18.24■□□□□ 0.51
TVP23A-208ENST00000573857 BRPF1P55201 1214 aaPredicted RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms