RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 LRRC37AA6NMS7 1700 aa11.57□□□□□ -0.56
NDE1-207ENST00000573203 SCN4AP35499 1836 aa11.56□□□□□ -0.56
NDE1-207ENST00000573203 IQCA1LA6NCM1 817 aa11.56□□□□□ -0.56
NDE1-207ENST00000573203 EIF6P56537 245 aaKnown RBP11.56□□□□□ -0.56
NDE1-207ENST00000573203 RPS8P62241 208 aaKnown RBP11.56□□□□□ -0.56
NDE1-207ENST00000573203 FSTL1Q12841 308 aa11.56□□□□□ -0.56
NDE1-207ENST00000573203 AOC3Q16853 763 aa11.56□□□□□ -0.56
NDE1-207ENST00000573203 ASTLQ6HA08 431 aaPredicted RBP11.56□□□□□ -0.56
NDE1-207ENST00000573203 NIM1KQ8IY84 436 aa11.56□□□□□ -0.56
NDE1-207ENST00000573203 SMC1BQ8NDV3 1235 aa11.56□□□□□ -0.56
NDE1-207ENST00000573203 CCDC85AQ96PX6 553 aaPredicted RBP11.56□□□□□ -0.56
NDE1-207ENST00000573203 RTFDC1Q9BY42 306 aaPredicted RBP11.56□□□□□ -0.56
NDE1-207ENST00000573203 VPS33BQ9H267 617 aa11.56□□□□□ -0.56
NDE1-207ENST00000573203 CDHR2Q9BYE9 1310 aa11.56□□□□□ -0.56
NDE1-207ENST00000573203 COL4A5P29400 1685 aa11.55□□□□□ -0.56
NDE1-207ENST00000573203 TIE1P35590 1138 aa11.55□□□□□ -0.56
NDE1-207ENST00000573203 UBE3BQ7Z3V4 1068 aa11.55□□□□□ -0.56
NDE1-207ENST00000573203 LINS1Q8NG48 757 aa11.55□□□□□ -0.56
NDE1-207ENST00000573203 L3MBTL3Q96JM7 780 aaPredicted RBP11.55□□□□□ -0.56
NDE1-207ENST00000573203 SEC31BQ9NQW1 1179 aa11.55□□□□□ -0.56
NDE1-207ENST00000573203 GJA3Q9Y6H8 435 aa11.55□□□□□ -0.56
NDE1-207ENST00000573203 COL4A1P02462 1669 aa11.55□□□□□ -0.56
NDE1-207ENST00000573203 CEP350Q5VT06 3117 aa11.54□□□□□ -0.56
NDE1-207ENST00000573203 H7C1W4 665 aa11.54□□□□□ -0.56
NDE1-207ENST00000573203 APLP1P51693 650 aa11.54□□□□□ -0.56
NDE1-207ENST00000573203 CTSWP56202 376 aa11.54□□□□□ -0.56
NDE1-207ENST00000573203 SLFN5Q08AF3 891 aa11.54□□□□□ -0.56
NDE1-207ENST00000573203 GCKRQ14397 625 aa11.54□□□□□ -0.56
NDE1-207ENST00000573203 GPC2Q8N158 579 aa11.54□□□□□ -0.56
NDE1-207ENST00000573203 NSFL1CQ9UNZ2 370 aaKnown RBP11.54□□□□□ -0.56
NDE1-207ENST00000573203 SPEF2Q9C093 1822 aa11.53□□□□□ -0.56
NDE1-207ENST00000573203 F6X3S4 739 aa11.53□□□□□ -0.56
NDE1-207ENST00000573203 C6orf229H3BNL8 230 aa11.53□□□□□ -0.56
NDE1-207ENST00000573203 KIAA2012Q0VF49 1180 aa11.53□□□□□ -0.56
NDE1-207ENST00000573203 ANKRD18AQ8IVF6 992 aa11.53□□□□□ -0.56
NDE1-207ENST00000573203 TAF1DQ9H5J8 278 aaPredicted RBP11.53□□□□□ -0.56
NDE1-207ENST00000573203 HACL1Q9UJ83 578 aa11.53□□□□□ -0.56
NDE1-207ENST00000573203 ATMINO43313 823 aaPredicted RBP11.52□□□□□ -0.57
NDE1-207ENST00000573203 PYGBP11216 843 aa11.52□□□□□ -0.57
NDE1-207ENST00000573203 LMOD1P29536 600 aaPredicted RBP11.52□□□□□ -0.57
NDE1-207ENST00000573203 GPSM2P81274 684 aa11.52□□□□□ -0.57
NDE1-207ENST00000573203 WASHC4Q2M389 1173 aa11.52□□□□□ -0.57
NDE1-207ENST00000573203 TTLL11Q8NHH1 800 aa11.52□□□□□ -0.57
NDE1-207ENST00000573203 CDCA7LQ96GN5 454 aa11.52□□□□□ -0.57
NDE1-207ENST00000573203 CDC5LQ99459 802 aaKnown RBP11.52□□□□□ -0.57
NDE1-207ENST00000573203 ZNRF3Q9ULT6 936 aa11.52□□□□□ -0.57
NDE1-207ENST00000573203 DUOX1Q9NRD9 1551 aa11.52□□□□□ -0.57
NDE1-207ENST00000573203 RIMBP2O15034 1052 aa11.51□□□□□ -0.57
NDE1-207ENST00000573203 EPHX2P34913 555 aa11.51□□□□□ -0.57
NDE1-207ENST00000573203 EAPPQ56P03 285 aaPredicted RBP11.51□□□□□ -0.57
NDE1-207ENST00000573203 BEND3Q5T5X7 828 aa11.51□□□□□ -0.57
NDE1-207ENST00000573203 SLC4A10Q6U841 1118 aa11.51□□□□□ -0.57
NDE1-207ENST00000573203 EYA3Q99504 573 aa11.51□□□□□ -0.57
NDE1-207ENST00000573203 PLA2G12BQ9BX93 195 aa11.51□□□□□ -0.57
NDE1-207ENST00000573203 GREM2Q9H772 168 aa11.51□□□□□ -0.57
NDE1-207ENST00000573203 ANKIB1Q9P2G1 1089 aa11.51□□□□□ -0.57
NDE1-207ENST00000573203 POLLQ9UGP5 575 aa11.51□□□□□ -0.57
NDE1-207ENST00000573203 CIZ1Q9ULV3 898 aaPredicted RBP11.51□□□□□ -0.57
NDE1-207ENST00000573203 GTF3C3Q9Y5Q9 886 aa11.51□□□□□ -0.57
NDE1-207ENST00000573203 LTBP1Q14766 1721 aa11.51□□□□□ -0.57
NDE1-207ENST00000573203 RAD17O75943 681 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 UFL1O94874 794 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 POTEJP0CG39 1038 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 CASP7P55210 303 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 CXCL9Q07325 125 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 CIAPIN1Q6FI81 312 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 LDHDQ86WU2 507 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 IFNL1Q8IU54 200 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 MRPL50Q8N5N7 158 aaKnown RBP11.5□□□□□ -0.57
NDE1-207ENST00000573203 TBC1D16Q8TBP0 767 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 PODXL2Q9NZ53 605 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 GGA1Q9UJY5 639 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 ZBED9Q6R2W3 1325 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 RTL9Q8NET4 1388 aa11.5□□□□□ -0.57
NDE1-207ENST00000573203 G3V3G9 751 aa11.49□□□□□ -0.57
NDE1-207ENST00000573203 ALDH1L1O75891 902 aa11.49□□□□□ -0.57
NDE1-207ENST00000573203 IGHMBP2P38935 993 aaKnown RBP11.49□□□□□ -0.57
NDE1-207ENST00000573203 HNRNPUQ00839 825 aaKnown RBP eCLIP11.49□□□□□ -0.57
NDE1-207ENST00000573203 TNIP1Q15025 636 aa11.49□□□□□ -0.57
NDE1-207ENST00000573203 ZNF467Q7Z7K2 595 aaPredicted RBP11.49□□□□□ -0.57
NDE1-207ENST00000573203 PNMA8AQ86V59 439 aaPredicted RBP11.49□□□□□ -0.57
NDE1-207ENST00000573203 TRMT2AQ8IZ69 625 aaKnown RBP11.49□□□□□ -0.57
NDE1-207ENST00000573203 SSH1Q8WYL5 1049 aa11.49□□□□□ -0.57
NDE1-207ENST00000573203 GPR101Q96P66 508 aaPredicted RBP11.49□□□□□ -0.57
NDE1-207ENST00000573203 ZC3H12CQ9C0D7 883 aaKnown RBP11.49□□□□□ -0.57
NDE1-207ENST00000573203 SRCIN1Q9C0H9 1055 aa11.49□□□□□ -0.57
NDE1-207ENST00000573203 C9orf78Q9NZ63 289 aaPredicted RBP11.49□□□□□ -0.57
NDE1-207ENST00000573203 XDHP47989 1333 aa11.49□□□□□ -0.57
NDE1-207ENST00000573203 YDJCA8MPS7 323 aa11.48□□□□□ -0.57
NDE1-207ENST00000573203 GRM8O00222 908 aa11.48□□□□□ -0.57
NDE1-207ENST00000573203 CSF1RP07333 972 aa11.48□□□□□ -0.57
NDE1-207ENST00000573203 ITGA6P23229 1130 aa11.48□□□□□ -0.57
NDE1-207ENST00000573203 EPS15P42566 896 aa11.48□□□□□ -0.57
NDE1-207ENST00000573203 SCNN1DP51172 638 aa11.48□□□□□ -0.57
NDE1-207ENST00000573203 HTRA3P83110 453 aa11.48□□□□□ -0.57
NDE1-207ENST00000573203 FAM161AQ3B820 660 aa11.48□□□□□ -0.57
NDE1-207ENST00000573203 BCL2L13Q9BXK5 485 aa11.48□□□□□ -0.57
NDE1-207ENST00000573203 DBNDD1Q9H9R9 158 aa11.48□□□□□ -0.57
NDE1-207ENST00000573203 BSDC1Q9NW68 430 aaPredicted RBP11.48□□□□□ -0.57
NDE1-207ENST00000573203 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms