RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 DCAF8Q5TAQ9 597 aa26.54■■□□□ 1.84
CHRNB1-204ENST00000572857 CDC5LQ99459 802 aaKnown RBP26.54■■□□□ 1.84
CHRNB1-204ENST00000572857 GREM2Q9H772 168 aa26.54■■□□□ 1.84
CHRNB1-204ENST00000572857 ZBTB12Q9Y330 459 aaPredicted RBP26.54■■□□□ 1.84
CHRNB1-204ENST00000572857 LRRC37AA6NMS7 1700 aa26.53■■□□□ 1.84
CHRNB1-204ENST00000572857 PSMD14O00487 310 aa26.53■■□□□ 1.84
CHRNB1-204ENST00000572857 ECE2O60344 883 aa26.53■■□□□ 1.84
CHRNB1-204ENST00000572857 LINS1Q8NG48 757 aa26.53■■□□□ 1.84
CHRNB1-204ENST00000572857 KCNQ5Q9NR82 932 aa26.53■■□□□ 1.84
CHRNB1-204ENST00000572857 CNOT7Q9UIV1 285 aaKnown RBP26.53■■□□□ 1.84
CHRNB1-204ENST00000572857 ADAMTSL1Q8N6G6 1762 aa26.53■■□□□ 1.84
CHRNB1-204ENST00000572857 FMR1Q06787 632 aaKnown RBP eCLIP26.52■■□□□ 1.84
CHRNB1-204ENST00000572857 SHTN1A0MZ66 631 aa26.51■■□□□ 1.83
CHRNB1-204ENST00000572857 F6X3S4 739 aa26.51■■□□□ 1.83
CHRNB1-204ENST00000572857 H7C1D1 291 aa26.5■■□□□ 1.83
CHRNB1-204ENST00000572857 TRAF5O00463 557 aa26.5■■□□□ 1.83
CHRNB1-204ENST00000572857 MICALL2Q8IY33 904 aa26.5■■□□□ 1.83
CHRNB1-204ENST00000572857 CNTNAP1P78357 1384 aa26.49■■□□□ 1.83
CHRNB1-204ENST00000572857 XDHP47989 1333 aa26.49■■□□□ 1.83
CHRNB1-204ENST00000572857 ABT1Q9ULW3 272 aaKnown RBP26.49■■□□□ 1.83
CHRNB1-204ENST00000572857 HSPA1AP0DMV8 641 aaKnown RBP26.48■■□□□ 1.83
CHRNB1-204ENST00000572857 HSPA1BP0DMV9 641 aaKnown RBP26.48■■□□□ 1.83
CHRNB1-204ENST00000572857 HIRAP54198 1017 aaPredicted RBP26.48■■□□□ 1.83
CHRNB1-204ENST00000572857 TRPM4Q8TD43 1214 aa26.48■■□□□ 1.83
CHRNB1-204ENST00000572857 BSDC1Q9NW68 430 aaPredicted RBP26.48■■□□□ 1.83
CHRNB1-204ENST00000572857 ATP2B4P23634 1241 aa26.47■■□□□ 1.83
CHRNB1-204ENST00000572857 CASP7P55210 303 aa26.47■■□□□ 1.83
CHRNB1-204ENST00000572857 DPF2Q92785 391 aa26.47■■□□□ 1.83
CHRNB1-204ENST00000572857 MINPP1Q9UNW1 487 aa26.47■■□□□ 1.83
CHRNB1-204ENST00000572857 RTL9Q8NET4 1388 aa26.46■■□□□ 1.83
CHRNB1-204ENST00000572857 ZNF521Q96K83 1311 aa26.46■■□□□ 1.83
CHRNB1-204ENST00000572857 WTIPA6NIX2 430 aaPredicted RBP26.46■■□□□ 1.83
CHRNB1-204ENST00000572857 VEGFBP49765 207 aa26.46■■□□□ 1.83
CHRNB1-204ENST00000572857 PLA2G12BQ9BX93 195 aa26.46■■□□□ 1.83
CHRNB1-204ENST00000572857 ITGA6P23229 1130 aa26.45■■□□□ 1.82
CHRNB1-204ENST00000572857 IGHMBP2P38935 993 aaKnown RBP26.45■■□□□ 1.82
CHRNB1-204ENST00000572857 DEFB115Q30KQ5 88 aa26.45■■□□□ 1.82
CHRNB1-204ENST00000572857 FAM161AQ3B820 660 aa26.45■■□□□ 1.82
CHRNB1-204ENST00000572857 BEND3Q5T5X7 828 aa26.45■■□□□ 1.82
CHRNB1-204ENST00000572857 IFFO2Q5TF58 517 aa26.45■■□□□ 1.82
CHRNB1-204ENST00000572857 SAMD7Q7Z3H4 446 aa26.45■■□□□ 1.82
CHRNB1-204ENST00000572857 GLIS2Q9BZE0 524 aaPredicted RBP26.45■■□□□ 1.82
CHRNB1-204ENST00000572857 RPS12P25398 132 aaKnown RBP26.44■■□□□ 1.82
CHRNB1-204ENST00000572857 TBC1D10BQ4KMP7 808 aaPredicted RBP26.44■■□□□ 1.82
CHRNB1-204ENST00000572857 RBM26Q5T8P6 1007 aaKnown RBP26.44■■□□□ 1.82
CHRNB1-204ENST00000572857 ZC3H15Q8WU90 426 aaKnown RBP26.43■■□□□ 1.82
CHRNB1-204ENST00000572857 PGAP2Q9UHJ9 254 aa26.43■■□□□ 1.82
CHRNB1-204ENST00000572857 RASSF10A6NK89 507 aa26.42■■□□□ 1.82
CHRNB1-204ENST00000572857 CSF1RP07333 972 aa26.42■■□□□ 1.82
CHRNB1-204ENST00000572857 VIL1P09327 827 aaKnown RBP26.42■■□□□ 1.82
CHRNB1-204ENST00000572857 CST9Q5W186 159 aa26.42■■□□□ 1.82
CHRNB1-204ENST00000572857 SLC4A10Q6U841 1118 aa26.42■■□□□ 1.82
CHRNB1-204ENST00000572857 MPHOSPH8Q99549 860 aa26.42■■□□□ 1.82
CHRNB1-204ENST00000572857 CCT4P50991 539 aaKnown RBP26.41■■□□□ 1.82
CHRNB1-204ENST00000572857 COL13A1Q5TAT6 717 aaPredicted RBP26.41■■□□□ 1.82
CHRNB1-204ENST00000572857 PCNTO95613 3336 aa26.41■■□□□ 1.82
CHRNB1-204ENST00000572857 PAXIP1Q6ZW49 1069 aaPredicted RBP26.4■■□□□ 1.82
CHRNB1-204ENST00000572857 CHMP3Q9Y3E7 222 aa26.4■■□□□ 1.82
CHRNB1-204ENST00000572857 CELF2O95319 508 aaKnown RBP26.39■■□□□ 1.82
CHRNB1-204ENST00000572857 EGFRP00533 1210 aa26.39■■□□□ 1.82
CHRNB1-204ENST00000572857 CDC37L1Q7L3B6 337 aa26.39■■□□□ 1.82
CHRNB1-204ENST00000572857 ZNF408Q9H9D4 720 aa26.39■■□□□ 1.82
CHRNB1-204ENST00000572857 ANKRD18BA2A2Z9 1011 aa26.38■■□□□ 1.81
CHRNB1-204ENST00000572857 E9PSI1 815 aa26.38■■□□□ 1.81
CHRNB1-204ENST00000572857 FOXO4P98177 505 aa26.38■■□□□ 1.81
CHRNB1-204ENST00000572857 USP48Q86UV5 1035 aa26.38■■□□□ 1.81
CHRNB1-204ENST00000572857 C9orf78Q9NZ63 289 aaPredicted RBP26.38■■□□□ 1.81
CHRNB1-204ENST00000572857 GRM8O00222 908 aa26.37■■□□□ 1.81
CHRNB1-204ENST00000572857 GRM1Q13255 1194 aa26.37■■□□□ 1.81
CHRNB1-204ENST00000572857 RSBN1LQ6PCB5 846 aaPredicted RBP26.37■■□□□ 1.81
CHRNB1-204ENST00000572857 PODNQ7Z5L7 613 aa26.37■■□□□ 1.81
CHRNB1-204ENST00000572857 ANKRD2Q9GZV1 360 aa26.37■■□□□ 1.81
CHRNB1-204ENST00000572857 LEMD3Q9Y2U8 911 aa26.37■■□□□ 1.81
CHRNB1-204ENST00000572857 USP17L3A6NCW0 530 aa26.36■■□□□ 1.81
CHRNB1-204ENST00000572857 USP17L4A6NCW7 530 aa26.36■■□□□ 1.81
CHRNB1-204ENST00000572857 IFIT5Q13325 482 aaKnown RBP26.36■■□□□ 1.81
CHRNB1-204ENST00000572857 USP17L1Q7RTZ2 530 aa26.36■■□□□ 1.81
CHRNB1-204ENST00000572857 SRCIN1Q9C0H9 1055 aa26.36■■□□□ 1.81
CHRNB1-204ENST00000572857 WDR33Q9C0J8 1336 aaKnown RBP26.36■■□□□ 1.81
CHRNB1-204ENST00000572857 MED23Q9ULK4 1368 aa26.35■■□□□ 1.81
CHRNB1-204ENST00000572857 ALDH1L1O75891 902 aa26.35■■□□□ 1.81
CHRNB1-204ENST00000572857 KIF4BQ2VIQ3 1234 aa26.35■■□□□ 1.81
CHRNB1-204ENST00000572857 EPHA10Q5JZY3 1008 aa26.35■■□□□ 1.81
CHRNB1-204ENST00000572857 LMBR1LQ6UX01 489 aa26.35■■□□□ 1.81
CHRNB1-204ENST00000572857 DLK2Q6UY11 383 aa26.35■■□□□ 1.81
CHRNB1-204ENST00000572857 AGBL3Q8NEM8 1001 aa26.35■■□□□ 1.81
CHRNB1-204ENST00000572857 ZNF804BA4D1E1 1349 aa26.35■■□□□ 1.81
CHRNB1-204ENST00000572857 CACNA1FO60840 1977 aa26.35■■□□□ 1.81
CHRNB1-204ENST00000572857 KCNJ4P48050 445 aa26.34■■□□□ 1.81
CHRNB1-204ENST00000572857 CHRNDQ07001 517 aa26.34■■□□□ 1.81
CHRNB1-204ENST00000572857 SLFN5Q08AF3 891 aa26.34■■□□□ 1.81
CHRNB1-204ENST00000572857 KRT26Q7Z3Y9 468 aa26.34■■□□□ 1.81
CHRNB1-204ENST00000572857 TXNRD3Q86VQ6 643 aa26.34■■□□□ 1.81
CHRNB1-204ENST00000572857 MRPL50Q8N5N7 158 aaKnown RBP26.34■■□□□ 1.81
CHRNB1-204ENST00000572857 FBXW7Q969H0 707 aa26.34■■□□□ 1.81
CHRNB1-204ENST00000572857 DCPSQ96C86 337 aaKnown RBP26.34■■□□□ 1.81
CHRNB1-204ENST00000572857 TLL2Q9Y6L7 1015 aa26.34■■□□□ 1.81
CHRNB1-204ENST00000572857 CYP4F22Q6NT55 531 aa26.33■■□□□ 1.81
CHRNB1-204ENST00000572857 AIDAQ96BJ3 306 aa26.33■■□□□ 1.81
CHRNB1-204ENST00000572857 CDCA7LQ96GN5 454 aa26.33■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms