RNA–Protein interactions for RNA: ENST00000572543.5

CAMTA2-208, Transcript of calmodulin binding transcription activator 2, human

APPRIS ALT2 TSL 5 BASIC

Gene CAMTA2, Length 4,496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA2-208	ENST00000572543	PPFIA3	O75145	1194 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	IQCE	Q6IPM2	695 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	CCDC148	Q8NFR7	591 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	GTF2E1	P29083	439 aa	Predicted RBP	13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	LMOD1	P29536	600 aa	Predicted RBP	13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	ISM2	Q6H9L7	571 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	VPS37D	Q86XT2	251 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	AMOTL1	Q8IY63	956 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	NUP133	Q8WUM0	1156 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	NAP1L1	P55209	391 aa	Known RBP	13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	PTH1R	Q03431	593 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	APOBR	Q0VD83	1088 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	BRAP	Q7Z569	592 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	CCDC196	A0A1B0GTZ2	297 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	IDH1	O75874	414 aa	Known RBP	13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	MCM3	P25205	808 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	MAP9	Q49MG5	647 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	NAA16	Q6N069	864 aa	Predicted RBP	13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	AIDA	Q96BJ3	306 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	LRRC7	Q96NW7	1537 aa		13.54	□□□□□ -0.24
CAMTA2-208	ENST00000572543	ZFY	P08048	801 aa	Predicted RBP	13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	IARS	P41252	1262 aa	Known RBP	13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	KANK3	Q6NY19	840 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	STK11IP	Q8N1F8	1099 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	BICC1	Q9H694	974 aa	Known RBP	13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	GOLGA8A	A7E2F4	631 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	XAGE3	Q8WTP9	111 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	LRMP	Q12912	555 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	TDRD7	Q8NHU6	1098 aa	Known RBP	13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	UBAC1	Q9BSL1	405 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	MRVI1	Q9Y6F6	885 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543		H0YHG0	523 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	METAP2	P50579	478 aa	Known RBP eCLIP	13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	HAND2	P61296	217 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	SSRP1	Q08945	709 aa	Known RBP	13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	SYCP1	Q15431	976 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	MRFAP1L1	Q96HT8	127 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	TPCN1	Q9ULQ1	816 aa		13.53	□□□□□ -0.24
CAMTA2-208	ENST00000572543	CDR1	P51861	262 aa		13.52	□□□□□ -0.24
CAMTA2-208	ENST00000572543	TRERF1	Q96PN7	1200 aa		13.52	□□□□□ -0.24
CAMTA2-208	ENST00000572543	TDO2	P48775	406 aa		13.52	□□□□□ -0.25
CAMTA2-208	ENST00000572543	ELF2	Q15723	593 aa		13.52	□□□□□ -0.25
CAMTA2-208	ENST00000572543	KLHL10	Q6JEL2	608 aa		13.52	□□□□□ -0.25
CAMTA2-208	ENST00000572543	COPS6	Q7L5N1	327 aa		13.52	□□□□□ -0.25
CAMTA2-208	ENST00000572543	METTL24	Q5JXM2	366 aa		13.52	□□□□□ -0.25
CAMTA2-208	ENST00000572543	SLC12A7	Q9Y666	1083 aa		13.52	□□□□□ -0.25
CAMTA2-208	ENST00000572543	SNRPA1	P09661	255 aa	Known RBP	13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	NEO1	Q92859	1461 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	GTF3C6	Q969F1	213 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	PAG1	Q9NWQ8	432 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	ATP5J2-PTCD1	G3V325	749 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	DTNB	O60941	627 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	PTCD1	O75127	700 aa	Known RBP	13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	LMAN1	P49257	510 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	CRACR2A	Q9BSW2	395 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	ABCC3	O15438	1527 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	TULP4	Q9NRJ4	1543 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	ALG1	Q9BT22	464 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	TMX4	Q9H1E5	349 aa	Predicted RBP	13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	CWC25	Q9NXE8	425 aa	Predicted RBP	13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543		A0A1B0GVL5	298 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	NR1I2	O75469	434 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	TMX1	Q9H3N1	280 aa		13.51	□□□□□ -0.25
CAMTA2-208	ENST00000572543	JAK2	O60674	1132 aa		13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	CDC25B	P30305	580 aa		13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	IL15	P40933	162 aa	Predicted RBP	13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	NAPB	Q9H115	298 aa		13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	HELLS	Q9NRZ9	838 aa		13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	ZC3H6	P61129	1189 aa	Known RBP	13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	GOLGA1	Q92805	767 aa		13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	EIF4A1	P60842	406 aa	Known RBP	13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	TUBB4B	P68371	445 aa		13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	MYL5	Q02045	173 aa		13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	KIAA1328	Q86T90	577 aa		13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	CPLX3	Q8WVH0	158 aa		13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	SPTLC3	Q9NUV7	552 aa		13.5	□□□□□ -0.25
CAMTA2-208	ENST00000572543	MARCKS	P29966	332 aa	Predicted RBP	13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	TFCP2	Q12800	502 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	LRRC8A	Q8IWT6	810 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	JARID2	Q92833	1246 aa	Predicted RBP	13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	IFIT3	O14879	490 aa	Known RBP	13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	PRC1	O43663	620 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	ADCK5	Q3MIX3	580 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	LMBR1L	Q6UX01	489 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	MAP4K1	Q92918	833 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	USP8	P40818	1118 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	BEND3	Q5T5X7	828 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	MICU3	Q86XE3	530 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	RAB11FIP4	Q86YS3	637 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	IL17RE	Q8NFR9	667 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	IP6K1	Q92551	441 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	SNRK	Q9NRH2	765 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	RNF113A	O15541	343 aa	Known RBP	13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	RNMT	O43148	476 aa	Known RBP	13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	IFIT5	Q13325	482 aa	Known RBP	13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	CCDC181	Q5TID7	509 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	IFNL2	Q8IZJ0	200 aa		13.49	□□□□□ -0.25
CAMTA2-208	ENST00000572543	LMTK2	Q8IWU2	1503 aa		13.49	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms