RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 GPR25O00155 361 aa13.39□□□□□ -0.27
CHMP6-203ENST00000572525 ECE2O60344 883 aa13.39□□□□□ -0.27
CHMP6-203ENST00000572525 AGBL3Q8NEM8 1001 aa13.39□□□□□ -0.27
CHMP6-203ENST00000572525 DBNDD1Q9H9R9 158 aa13.39□□□□□ -0.27
CHMP6-203ENST00000572525 MIS18AQ9NYP9 233 aa13.39□□□□□ -0.27
CHMP6-203ENST00000572525 PDIA6Q15084 440 aa13.38□□□□□ -0.27
CHMP6-203ENST00000572525 SF3B3Q15393 1217 aaKnown RBP13.38□□□□□ -0.27
CHMP6-203ENST00000572525 NEFMP07197 916 aa13.37□□□□□ -0.27
CHMP6-203ENST00000572525 HCLS1P14317 486 aaPredicted RBP13.37□□□□□ -0.27
CHMP6-203ENST00000572525 SREBF2Q12772 1141 aa13.37□□□□□ -0.27
CHMP6-203ENST00000572525 TCIRG1Q13488 830 aa13.37□□□□□ -0.27
CHMP6-203ENST00000572525 BABAM1Q9NWV8 329 aa13.37□□□□□ -0.27
CHMP6-203ENST00000572525 PODXL2Q9NZ53 605 aa13.37□□□□□ -0.27
CHMP6-203ENST00000572525 POLLQ9UGP5 575 aa13.37□□□□□ -0.27
CHMP6-203ENST00000572525 TRMT112Q9UI30 125 aaKnown RBP13.37□□□□□ -0.27
CHMP6-203ENST00000572525 NSFL1CQ9UNZ2 370 aaKnown RBP13.37□□□□□ -0.27
CHMP6-203ENST00000572525 MYH3P11055 1940 aa13.37□□□□□ -0.27
CHMP6-203ENST00000572525 A0A0C4DFX4 3053 aa13.36□□□□□ -0.27
CHMP6-203ENST00000572525 SZT2Q5T011 3432 aa13.36□□□□□ -0.27
CHMP6-203ENST00000572525 FKTNO75072 461 aa13.36□□□□□ -0.27
CHMP6-203ENST00000572525 FXR1P51114 621 aaKnown RBP eCLIP13.36□□□□□ -0.27
CHMP6-203ENST00000572525 RBM26Q5T8P6 1007 aaKnown RBP13.36□□□□□ -0.27
CHMP6-203ENST00000572525 COL4A1P02462 1669 aa13.36□□□□□ -0.27
CHMP6-203ENST00000572525 C6orf229H3BNL8 230 aa13.35□□□□□ -0.27
CHMP6-203ENST00000572525 TBC1D8O95759 1140 aa13.35□□□□□ -0.27
CHMP6-203ENST00000572525 ALDH1A1P00352 501 aa13.35□□□□□ -0.27
CHMP6-203ENST00000572525 MMP14P50281 582 aa13.35□□□□□ -0.27
CHMP6-203ENST00000572525 ANGEL2Q5VTE6 544 aaKnown RBP13.35□□□□□ -0.27
CHMP6-203ENST00000572525 TBC1D16Q8TBP0 767 aa13.35□□□□□ -0.27
CHMP6-203ENST00000572525 SCARF1Q14162 830 aa13.34□□□□□ -0.27
CHMP6-203ENST00000572525 RSBN1LQ6PCB5 846 aaPredicted RBP13.34□□□□□ -0.27
CHMP6-203ENST00000572525 GMLQ99445 158 aa13.34□□□□□ -0.27
CHMP6-203ENST00000572525 ZC3H12CQ9C0D7 883 aaKnown RBP13.34□□□□□ -0.27
CHMP6-203ENST00000572525 ASTN2O75129 1339 aaPredicted RBP13.34□□□□□ -0.27
CHMP6-203ENST00000572525 RANBP2P49792 3224 aaKnown RBP13.34□□□□□ -0.27
CHMP6-203ENST00000572525 RIMBP2O15034 1052 aa13.33□□□□□ -0.28
CHMP6-203ENST00000572525 PPP2R1AP30153 589 aa13.33□□□□□ -0.28
CHMP6-203ENST00000572525 GPSM2P81274 684 aa13.33□□□□□ -0.28
CHMP6-203ENST00000572525 NFE2L2Q16236 605 aa13.33□□□□□ -0.28
CHMP6-203ENST00000572525 CELF1Q92879 486 aaKnown RBP13.33□□□□□ -0.28
CHMP6-203ENST00000572525 KCNQ5Q9NR82 932 aa13.33□□□□□ -0.28
CHMP6-203ENST00000572525 COL1A1P02452 1464 aaPredicted RBP13.32□□□□□ -0.28
CHMP6-203ENST00000572525 NF2P35240 595 aa13.32□□□□□ -0.28
CHMP6-203ENST00000572525 INHBEP58166 350 aa13.32□□□□□ -0.28
CHMP6-203ENST00000572525 PROSER3Q2NL68 480 aa13.32□□□□□ -0.28
CHMP6-203ENST00000572525 COPS6Q7L5N1 327 aa13.32□□□□□ -0.28
CHMP6-203ENST00000572525 PLEKHF1Q96S99 279 aa13.32□□□□□ -0.28
CHMP6-203ENST00000572525 THUMPD2Q9BTF0 503 aaKnown RBP13.32□□□□□ -0.28
CHMP6-203ENST00000572525 MYOZ2Q9NPC6 264 aa13.32□□□□□ -0.28
CHMP6-203ENST00000572525 USP17L8P0C7I0 530 aa13.31□□□□□ -0.28
CHMP6-203ENST00000572525 RPS8P62241 208 aaKnown RBP13.31□□□□□ -0.28
CHMP6-203ENST00000572525 DOK7Q18PE1 504 aa13.31□□□□□ -0.28
CHMP6-203ENST00000572525 UBE2Q2LH0YL09 131 aa13.3□□□□□ -0.28
CHMP6-203ENST00000572525 HSP90B1P14625 803 aaKnown RBP13.3□□□□□ -0.28
CHMP6-203ENST00000572525 TRIM28Q13263 835 aaKnown RBP13.3□□□□□ -0.28
CHMP6-203ENST00000572525 PODNQ7Z5L7 613 aa13.3□□□□□ -0.28
CHMP6-203ENST00000572525 XAGE3Q8WTP9 111 aa13.3□□□□□ -0.28
CHMP6-203ENST00000572525 ARMC5Q96C12 935 aa13.3□□□□□ -0.28
CHMP6-203ENST00000572525 ISCA1Q9BUE6 129 aa13.3□□□□□ -0.28
CHMP6-203ENST00000572525 PNNQ9H307 717 aaKnown RBP13.3□□□□□ -0.28
CHMP6-203ENST00000572525 TSPYL4Q9UJ04 414 aa13.3□□□□□ -0.28
CHMP6-203ENST00000572525 COL6A3P12111 3177 aa13.29□□□□□ -0.28
CHMP6-203ENST00000572525 POTEFA5A3E0 1075 aa13.29□□□□□ -0.28
CHMP6-203ENST00000572525 UNCXA6NJT0 531 aa13.29□□□□□ -0.28
CHMP6-203ENST00000572525 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
CHMP6-203ENST00000572525 OTOP1Q7RTM1 612 aa13.29□□□□□ -0.28
CHMP6-203ENST00000572525 PLBD2Q8NHP8 589 aa13.29□□□□□ -0.28
CHMP6-203ENST00000572525 GGA1Q9UJY5 639 aa13.29□□□□□ -0.28
CHMP6-203ENST00000572525 MYO3BQ8WXR4 1341 aa13.29□□□□□ -0.28
CHMP6-203ENST00000572525 SPEF2Q9C093 1822 aa13.29□□□□□ -0.28
CHMP6-203ENST00000572525 MANSC4A6NHS7 340 aaPredicted RBP13.28□□□□□ -0.28
CHMP6-203ENST00000572525 G3V3G9 751 aa13.28□□□□□ -0.28
CHMP6-203ENST00000572525 UFL1O94874 794 aa13.28□□□□□ -0.28
CHMP6-203ENST00000572525 ZBTB48P10074 688 aaPredicted RBP13.28□□□□□ -0.28
CHMP6-203ENST00000572525 LDLRAD1Q5T700 205 aa13.28□□□□□ -0.28
CHMP6-203ENST00000572525 DCAF8Q5TAQ9 597 aa13.28□□□□□ -0.28
CHMP6-203ENST00000572525 SPRYD7Q5W111 196 aa13.28□□□□□ -0.28
CHMP6-203ENST00000572525 MOB2Q70IA6 237 aa13.28□□□□□ -0.28
CHMP6-203ENST00000572525 ARMC9Q7Z3E5 817 aa13.28□□□□□ -0.28
CHMP6-203ENST00000572525 USP17L3A6NCW0 530 aa13.27□□□□□ -0.29
CHMP6-203ENST00000572525 USP17L4A6NCW7 530 aa13.27□□□□□ -0.29
CHMP6-203ENST00000572525 ANXA1P04083 346 aa13.27□□□□□ -0.29
CHMP6-203ENST00000572525 USP17L1Q7RTZ2 530 aa13.27□□□□□ -0.29
CHMP6-203ENST00000572525 FAM89AQ96GI7 184 aa13.27□□□□□ -0.29
CHMP6-203ENST00000572525 ERO1AQ96HE7 468 aa13.27□□□□□ -0.29
CHMP6-203ENST00000572525 TRIM17Q9Y577 477 aa13.27□□□□□ -0.29
CHMP6-203ENST00000572525 WNT10BO00744 389 aa13.26□□□□□ -0.29
CHMP6-203ENST00000572525 HOXB7P09629 217 aa13.26□□□□□ -0.29
CHMP6-203ENST00000572525 XDHP47989 1333 aa13.26□□□□□ -0.29
CHMP6-203ENST00000572525 AIMP1Q12904 312 aaKnown RBP13.26□□□□□ -0.29
CHMP6-203ENST00000572525 TTLL12Q14166 644 aaPredicted RBP13.26□□□□□ -0.29
CHMP6-203ENST00000572525 MAP3K11Q16584 847 aa13.26□□□□□ -0.29
CHMP6-203ENST00000572525 APOBEC3FQ8IUX4 373 aaKnown RBP13.26□□□□□ -0.29
CHMP6-203ENST00000572525 R3HDMLQ9H3Y0 253 aa13.26□□□□□ -0.29
CHMP6-203ENST00000572525 OTOFQ9HC10 1997 aa13.26□□□□□ -0.29
CHMP6-203ENST00000572525 ANKIB1Q9P2G1 1089 aa13.26□□□□□ -0.29
CHMP6-203ENST00000572525 MED23Q9ULK4 1368 aa13.26□□□□□ -0.29
CHMP6-203ENST00000572525 PTPN22Q9Y2R2 807 aa13.26□□□□□ -0.29
CHMP6-203ENST00000572525 MAPK8IP3Q9UPT6 1336 aa13.25□□□□□ -0.29
CHMP6-203ENST00000572525 IRS4O14654 1257 aaPredicted RBP13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms